RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 SCFD2Q8WU76 684 aa21.96■■□□□ 1.11
DDX55-211ENST00000544429 WDR11Q9BZH6 1224 aa21.96■■□□□ 1.11
DDX55-211ENST00000544429 PDE4DIPQ5VU43 2346 aa21.95■■□□□ 1.1
DDX55-211ENST00000544429 ADAMTS3O15072 1205 aa21.95■■□□□ 1.1
DDX55-211ENST00000544429 ARIH2O95376 493 aa21.95■■□□□ 1.1
DDX55-211ENST00000544429 MLLT1Q03111 559 aaPredicted RBP21.95■■□□□ 1.1
DDX55-211ENST00000544429 XRRA1Q6P2D8 792 aa21.95■■□□□ 1.1
DDX55-211ENST00000544429 NECAB2Q7Z6G3 386 aa21.95■■□□□ 1.1
DDX55-211ENST00000544429 NSUN7Q8NE18 718 aaKnown RBP21.95■■□□□ 1.1
DDX55-211ENST00000544429 CCDC12Q8WUD4 166 aaPredicted RBP21.95■■□□□ 1.1
DDX55-211ENST00000544429 MYADML2A6NDP7 307 aa21.94■■□□□ 1.1
DDX55-211ENST00000544429 STAM2O75886 525 aa21.94■■□□□ 1.1
DDX55-211ENST00000544429 FOSP01100 380 aaPredicted RBP21.94■■□□□ 1.1
DDX55-211ENST00000544429 FDPSP14324 419 aaKnown RBP21.94■■□□□ 1.1
DDX55-211ENST00000544429 PTGS1P23219 599 aa21.94■■□□□ 1.1
DDX55-211ENST00000544429 CCND2P30279 289 aa21.94■■□□□ 1.1
DDX55-211ENST00000544429 GJC2Q5T442 439 aaPredicted RBP21.94■■□□□ 1.1
DDX55-211ENST00000544429 AIFM3Q96NN9 605 aa21.94■■□□□ 1.1
DDX55-211ENST00000544429 INPP4AQ96PE3 977 aaPredicted RBP21.94■■□□□ 1.1
DDX55-211ENST00000544429 VPS54Q9P1Q0 977 aa21.94■■□□□ 1.1
DDX55-211ENST00000544429 PCDHA6Q9UN73 950 aa21.94■■□□□ 1.1
DDX55-211ENST00000544429 PCDHA8Q9Y5H6 950 aa21.94■■□□□ 1.1
DDX55-211ENST00000544429 MYH7BA7E2Y1 1941 aa21.93■■□□□ 1.1
DDX55-211ENST00000544429 NKRFO15226 690 aaKnown RBP eCLIP21.93■■□□□ 1.1
DDX55-211ENST00000544429 CD2BP2O95400 341 aaKnown RBP21.93■■□□□ 1.1
DDX55-211ENST00000544429 IRX5P78411 483 aaPredicted RBP21.93■■□□□ 1.1
DDX55-211ENST00000544429 AP3B2Q13367 1082 aa21.93■■□□□ 1.1
DDX55-211ENST00000544429 NPY5RQ15761 445 aa21.93■■□□□ 1.1
DDX55-211ENST00000544429 RNF180Q86T96 592 aa21.93■■□□□ 1.1
DDX55-211ENST00000544429 TLK2Q86UE8 772 aa21.93■■□□□ 1.1
DDX55-211ENST00000544429 CCDC148Q8NFR7 591 aa21.93■■□□□ 1.1
DDX55-211ENST00000544429 CRYGNQ8WXF5 182 aa21.93■■□□□ 1.1
DDX55-211ENST00000544429 ZSCAN31Q96LW9 406 aaPredicted RBP21.93■■□□□ 1.1
DDX55-211ENST00000544429 TSEN34Q9BSV6 310 aaKnown RBP21.93■■□□□ 1.1
DDX55-211ENST00000544429 SH2B1Q9NRF2 756 aaPredicted RBP21.93■■□□□ 1.1
DDX55-211ENST00000544429 PHF24Q9UPV7 400 aa21.93■■□□□ 1.1
DDX55-211ENST00000544429 SPDYE3A6NKU9 549 aa21.92■■□□□ 1.1
DDX55-211ENST00000544429 MYCLP12524 364 aaPredicted RBP21.92■■□□□ 1.1
DDX55-211ENST00000544429 GNA11P29992 359 aa21.92■■□□□ 1.1
DDX55-211ENST00000544429 ICAM3P32942 547 aa21.92■■□□□ 1.1
DDX55-211ENST00000544429 TTLL4Q14679 1199 aa21.92■■□□□ 1.1
DDX55-211ENST00000544429 C11orf49Q9H6J7 331 aa21.92■■□□□ 1.1
DDX55-211ENST00000544429 C6orf50Q9HD87 102 aa21.92■■□□□ 1.1
DDX55-211ENST00000544429 DDX41Q9UJV9 622 aaKnown RBP21.92■■□□□ 1.1
DDX55-211ENST00000544429 KBTBD13C9JR72 458 aa21.91■■□□□ 1.1
DDX55-211ENST00000544429 M0R2N6 131 aa21.91■■□□□ 1.1
DDX55-211ENST00000544429 ST18O60284 1047 aa21.91■■□□□ 1.1
DDX55-211ENST00000544429 TXNP10599 105 aaKnown RBP21.91■■□□□ 1.1
DDX55-211ENST00000544429 MCTP2Q6DN12 878 aa21.91■■□□□ 1.1
DDX55-211ENST00000544429 SEPT14Q6ZU15 432 aa21.91■■□□□ 1.1
DDX55-211ENST00000544429 TMEM260Q9NX78 707 aa21.91■■□□□ 1.1
DDX55-211ENST00000544429 DTNBO60941 627 aa21.9■■□□□ 1.1
DDX55-211ENST00000544429 TGFB3P10600 412 aa21.9■■□□□ 1.1
DDX55-211ENST00000544429 SREBF1P36956 1147 aa21.9■■□□□ 1.1
DDX55-211ENST00000544429 SEMA3FQ13275 785 aa21.9■■□□□ 1.1
DDX55-211ENST00000544429 KCNV1Q6PIU1 500 aa21.9■■□□□ 1.1
DDX55-211ENST00000544429 REXO1Q8N1G1 1221 aaKnown RBP21.9■■□□□ 1.1
DDX55-211ENST00000544429 DAGLBQ8NCG7 672 aa21.9■■□□□ 1.1
DDX55-211ENST00000544429 EMID1Q96A84 441 aaPredicted RBP21.9■■□□□ 1.1
DDX55-211ENST00000544429 LLPHQ9BRT6 129 aaKnown RBP21.9■■□□□ 1.1
DDX55-211ENST00000544429 ANO3Q9BYT9 981 aa21.9■■□□□ 1.1
DDX55-211ENST00000544429 ORC3Q9UBD5 711 aaPredicted RBP21.9■■□□□ 1.1
DDX55-211ENST00000544429 MOXD2PA6NHM9 499 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 SPATA31C2B4DYI2 1134 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 DYNC1LI2O43237 492 aaPredicted RBP21.89■■□□□ 1.09
DDX55-211ENST00000544429 JAK2O60674 1132 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 C6orf222P0C671 652 aaPredicted RBP21.89■■□□□ 1.09
DDX55-211ENST00000544429 ACLYP53396 1101 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 ARHGAP1Q07960 439 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 SNX17Q15036 470 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 KCNA10Q16322 511 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 FSCN1Q16658 493 aaKnown RBP21.89■■□□□ 1.09
DDX55-211ENST00000544429 LY6KQ17RY6 165 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 BICD2Q8TD16 824 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 COPS5Q92905 334 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 ZFP91Q96JP5 570 aaPredicted RBP21.89■■□□□ 1.09
DDX55-211ENST00000544429 PHF20Q9BVI0 1012 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 SPC25Q9HBM1 224 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 UBIAD1Q9Y5Z9 338 aa21.89■■□□□ 1.09
DDX55-211ENST00000544429 DOCK5Q9H7D0 1870 aa21.88■■□□□ 1.09
DDX55-211ENST00000544429 A6NJR5 290 aa21.88■■□□□ 1.09
DDX55-211ENST00000544429 ITGB5P18084 799 aa21.88■■□□□ 1.09
DDX55-211ENST00000544429 SP2Q02086 613 aa21.88■■□□□ 1.09
DDX55-211ENST00000544429 GALNT17Q6IS24 598 aa21.88■■□□□ 1.09
DDX55-211ENST00000544429 PCSK9Q8NBP7 692 aaKnown RBP21.88■■□□□ 1.09
DDX55-211ENST00000544429 PGBD1Q96JS3 809 aa21.88■■□□□ 1.09
DDX55-211ENST00000544429 AP5M1Q9H0R1 490 aa21.88■■□□□ 1.09
DDX55-211ENST00000544429 EHMT1Q9H9B1 1298 aa21.88■■□□□ 1.09
DDX55-211ENST00000544429 PCDHA4Q9UN74 947 aa21.88■■□□□ 1.09
DDX55-211ENST00000544429 MRVI1Q9Y6F6 885 aa21.88■■□□□ 1.09
DDX55-211ENST00000544429 SCN10AQ9Y5Y9 1956 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 FIBPO43427 364 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 CYP3A4P08684 503 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 NLRP5P59047 1200 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 BEX3Q00994 111 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 GNPTABQ3T906 1256 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 GNASQ5JWF2 1037 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 C1orf53Q5VUE5 145 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 JAKMIP3Q5VZ66 844 aa21.87■■□□□ 1.09
DDX55-211ENST00000544429 CCDC83Q8IWF9 413 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms