RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 EIF3CLB5ME19 914 aaKnown RBP19.74■□□□□ 0.75
SCARB1-208ENST00000544327 PSMD14O00487 310 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 FAM193AP78312 1265 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 MAN2A1Q16706 1144 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 QRICH1Q2TAL8 776 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 VWA3BQ502W6 1294 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 DACT2Q5SW24 774 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 MCTP2Q6DN12 878 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 KCNK18Q7Z418 384 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 DDX12PQ92771 950 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 EIF3CQ99613 913 aaKnown RBP19.74■□□□□ 0.75
SCARB1-208ENST00000544327 NT5C3AQ9H0P0 336 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 AGPAT5Q9NUQ2 364 aa19.74■□□□□ 0.75
SCARB1-208ENST00000544327 MMP10P09238 476 aa19.73■□□□□ 0.75
SCARB1-208ENST00000544327 BRD3Q15059 726 aa19.73■□□□□ 0.75
SCARB1-208ENST00000544327 STYK1Q6J9G0 422 aa19.73■□□□□ 0.75
SCARB1-208ENST00000544327 LRRC55Q6ZSA7 311 aa19.73■□□□□ 0.75
SCARB1-208ENST00000544327 MSANTD4Q8NCY6 345 aa19.73■□□□□ 0.75
SCARB1-208ENST00000544327 DNAJC19Q96DA6 116 aa19.73■□□□□ 0.75
SCARB1-208ENST00000544327 FAM198AQ9UFP1 575 aa19.73■□□□□ 0.75
SCARB1-208ENST00000544327 CCDC151A5D8V7 595 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 EEF2P13639 858 aaKnown RBP19.72■□□□□ 0.75
SCARB1-208ENST00000544327 ATP2B2Q01814 1243 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 AP3B2Q13367 1082 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 ECM1Q16610 540 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 CERKLQ49MI3 558 aaPredicted RBP19.72■□□□□ 0.75
SCARB1-208ENST00000544327 SLFN13Q68D06 897 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 EHBP1Q8NDI1 1231 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 KCNMB3Q9NPA1 279 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 RAB21Q9UL25 225 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 SIK3Q9Y2K2 1263 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 COL2A1P02458 1487 aaPredicted RBP19.72■□□□□ 0.75
SCARB1-208ENST00000544327 SLC1A4P43007 532 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 PLA2G4AP47712 749 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 KLK7P49862 253 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 DYMQ7RTS9 669 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 GMCL1P1Q8NEA9 526 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 EPC1Q9H2F5 836 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 DBNDD1Q9H9R9 158 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 SERPINA10Q9UK55 444 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 PCDHA12Q9UN75 941 aa19.72■□□□□ 0.75
SCARB1-208ENST00000544327 SCN9AQ15858 1988 aa19.71■□□□□ 0.75
SCARB1-208ENST00000544327 DDTLA6NHG4 134 aaPredicted RBP19.71■□□□□ 0.75
SCARB1-208ENST00000544327 COASYQ13057 564 aa19.71■□□□□ 0.75
SCARB1-208ENST00000544327 CDC37Q16543 378 aaPredicted RBP19.71■□□□□ 0.75
SCARB1-208ENST00000544327 ZCWPW2Q504Y3 356 aa19.71■□□□□ 0.75
SCARB1-208ENST00000544327 ARHGAP27Q6ZUM4 889 aa19.71■□□□□ 0.75
SCARB1-208ENST00000544327 TMEM179Q6ZVK1 233 aa19.71■□□□□ 0.75
SCARB1-208ENST00000544327 SH3BP5LQ7L8J4 393 aa19.71■□□□□ 0.75
SCARB1-208ENST00000544327 HNRNPLLQ8WVV9 542 aaKnown RBP19.71■□□□□ 0.75
SCARB1-208ENST00000544327 CRYGNQ8WXF5 182 aa19.71■□□□□ 0.75
SCARB1-208ENST00000544327 TSG101Q99816 390 aa19.71■□□□□ 0.75
SCARB1-208ENST00000544327 ANO3Q9BYT9 981 aa19.71■□□□□ 0.75
SCARB1-208ENST00000544327 UBXN6Q9BZV1 441 aa19.71■□□□□ 0.75
SCARB1-208ENST00000544327 NDST4Q9H3R1 872 aa19.71■□□□□ 0.75
SCARB1-208ENST00000544327 NHEJ1Q9H9Q4 299 aaPredicted RBP19.71■□□□□ 0.75
SCARB1-208ENST00000544327 TBC1D8O95759 1140 aa19.7■□□□□ 0.74
SCARB1-208ENST00000544327 TRAPPC11Q7Z392 1133 aa19.7■□□□□ 0.74
SCARB1-208ENST00000544327 CCDC84Q86UT8 332 aaPredicted RBP19.7■□□□□ 0.74
SCARB1-208ENST00000544327 SIAH1Q8IUQ4 282 aa19.7■□□□□ 0.74
SCARB1-208ENST00000544327 GMCL1Q96IK5 515 aa19.7■□□□□ 0.74
SCARB1-208ENST00000544327 PURBQ96QR8 312 aaKnown RBP19.7■□□□□ 0.74
SCARB1-208ENST00000544327 EDEM3Q9BZQ6 932 aa19.7■□□□□ 0.74
SCARB1-208ENST00000544327 ANKZF1Q9H8Y5 726 aa19.7■□□□□ 0.74
SCARB1-208ENST00000544327 ARFGAP3Q9NP61 516 aa19.7■□□□□ 0.74
SCARB1-208ENST00000544327 KCNQ5Q9NR82 932 aa19.7■□□□□ 0.74
SCARB1-208ENST00000544327 PRDM4Q9UKN5 801 aa19.7■□□□□ 0.74
SCARB1-208ENST00000544327 MYO6Q9UM54 1294 aa19.7■□□□□ 0.74
SCARB1-208ENST00000544327 PCDHA1Q9Y5I3 950 aa19.7■□□□□ 0.74
SCARB1-208ENST00000544327 ATRNL1Q5VV63 1379 aa19.7■□□□□ 0.74
SCARB1-208ENST00000544327 IDEP14735 1019 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 MMP14P50281 582 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 MYOCDQ8IZQ8 938 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 PUF60Q9UHX1 559 aaKnown RBP19.69■□□□□ 0.74
SCARB1-208ENST00000544327 GUCA1BQ9UMX6 200 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 PLAGL2Q9UPG8 496 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 CTAGE15A4D2H0 777 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 NKRFO15226 690 aaKnown RBP eCLIP19.69■□□□□ 0.74
SCARB1-208ENST00000544327 KRT86O43790 486 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 MARCH6O60337 910 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 ECE2O60344 883 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 SEC31AO94979 1220 aaKnown RBP19.69■□□□□ 0.74
SCARB1-208ENST00000544327 TUBBP07437 444 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 CTAGE8P0CG41 777 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 CCDC122Q5T0U0 273 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 PAPD7Q5XG87 772 aaKnown RBP19.69■□□□□ 0.74
SCARB1-208ENST00000544327 CTAGE6Q86UF2 777 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 C2CD5Q86YS7 1000 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 KIAA0825Q8IV33 1275 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 CTAGE4Q8IX94 777 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 SLFN12Q8IYM2 578 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 ZNF622Q969S3 477 aaKnown RBP eCLIP19.69■□□□□ 0.741e-7■□□□□ 9.5
SCARB1-208ENST00000544327 JAKMIP2Q96AA8 810 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 EEF2KMTQ96G04 330 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 PCMTD1Q96MG8 357 aaPredicted RBP19.69■□□□□ 0.74
SCARB1-208ENST00000544327 BMP2KQ9NSY1 1161 aaPredicted RBP19.69■□□□□ 0.74
SCARB1-208ENST00000544327 TRIM10Q9UDY6 481 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 SYNPO2Q9UMS6 1093 aa19.69■□□□□ 0.74
SCARB1-208ENST00000544327 MEIS2O14770 477 aa19.68■□□□□ 0.74
SCARB1-208ENST00000544327 TBX3O15119 743 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms