RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 OGDHLQ9ULD0 1010 aa22.25■■□□□ 1.15
DDX55-207ENST00000540763 PCDHA4Q9UN74 947 aa22.25■■□□□ 1.15
DDX55-207ENST00000540763 RARBP10826 455 aa22.24■■□□□ 1.15
DDX55-207ENST00000540763 ANKLE1Q8NAG6 615 aa22.24■■□□□ 1.15
DDX55-207ENST00000540763 SCFD2Q8WU76 684 aa22.24■■□□□ 1.15
DDX55-207ENST00000540763 ANO3Q9BYT9 981 aa22.24■■□□□ 1.15
DDX55-207ENST00000540763 DDX49Q9Y6V7 483 aaKnown RBP22.24■■□□□ 1.15
DDX55-207ENST00000540763 DUSP11O75319 330 aaKnown RBP22.23■■□□□ 1.15
DDX55-207ENST00000540763 SREBF1P36956 1147 aa22.23■■□□□ 1.15
DDX55-207ENST00000540763 NPY5RQ15761 445 aa22.23■■□□□ 1.15
DDX55-207ENST00000540763 EEPD1Q7L9B9 569 aa22.23■■□□□ 1.15
DDX55-207ENST00000540763 IL31RAQ8NI17 732 aa22.23■■□□□ 1.15
DDX55-207ENST00000540763 Q9Y3F1 56 aa22.23■■□□□ 1.15
DDX55-207ENST00000540763 KIF3AQ9Y496 699 aa22.23■■□□□ 1.15
DDX55-207ENST00000540763 NKRFO15226 690 aaKnown RBP eCLIP22.22■■□□□ 1.15
DDX55-207ENST00000540763 NKX3-2P78367 333 aa22.22■■□□□ 1.15
DDX55-207ENST00000540763 TNFAIP2Q03169 654 aa22.22■■□□□ 1.15
DDX55-207ENST00000540763 KCNV1Q6PIU1 500 aa22.22■■□□□ 1.15
DDX55-207ENST00000540763 BLIDQ8IZY5 108 aa22.22■■□□□ 1.15
DDX55-207ENST00000540763 INPP4AQ96PE3 977 aaPredicted RBP22.22■■□□□ 1.15
DDX55-207ENST00000540763 M0R2N6 131 aa22.21■■□□□ 1.15
DDX55-207ENST00000540763 MYCLP12524 364 aaPredicted RBP22.21■■□□□ 1.15
DDX55-207ENST00000540763 ADCYAP1R1P41586 468 aa22.21■■□□□ 1.15
DDX55-207ENST00000540763 MRPS9P82933 396 aaKnown RBP22.21■■□□□ 1.15
DDX55-207ENST00000540763 CUL4AQ13619 759 aa22.21■■□□□ 1.15
DDX55-207ENST00000540763 TTLL4Q14679 1199 aa22.21■■□□□ 1.15
DDX55-207ENST00000540763 GNPTABQ3T906 1256 aa22.21■■□□□ 1.15
DDX55-207ENST00000540763 DUSP28Q4G0W2 176 aa22.21■■□□□ 1.15
DDX55-207ENST00000540763 PDGFCQ9NRA1 345 aa22.21■■□□□ 1.15
DDX55-207ENST00000540763 GNEQ9Y223 722 aaKnown RBP22.21■■□□□ 1.15
DDX55-207ENST00000540763 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.21■■□□□ 1.15
DDX55-207ENST00000540763 K7ELQ4 463 aaPredicted RBP22.2■■□□□ 1.14
DDX55-207ENST00000540763 ADCY6O43306 1168 aa22.2■■□□□ 1.14
DDX55-207ENST00000540763 TGFB3P10600 412 aa22.2■■□□□ 1.14
DDX55-207ENST00000540763 TRIM29Q14134 588 aa22.2■■□□□ 1.14
DDX55-207ENST00000540763 HABP4Q5JVS0 413 aaKnown RBP22.2■■□□□ 1.14
DDX55-207ENST00000540763 JAKMIP3Q5VZ66 844 aa22.2■■□□□ 1.14
DDX55-207ENST00000540763 CRYGNQ8WXF5 182 aa22.2■■□□□ 1.14
DDX55-207ENST00000540763 WDR11Q9BZH6 1224 aa22.2■■□□□ 1.14
DDX55-207ENST00000540763 UPF3AQ9H1J1 476 aaKnown RBP22.2■■□□□ 1.14
DDX55-207ENST00000540763 BRMS1Q9HCU9 246 aa22.2■■□□□ 1.14
DDX55-207ENST00000540763 XPNPEP3Q9NQH7 507 aa22.2■■□□□ 1.14
DDX55-207ENST00000540763 TMEM260Q9NX78 707 aa22.2■■□□□ 1.14
DDX55-207ENST00000540763 RGS20O76081 388 aa22.19■■□□□ 1.14
DDX55-207ENST00000540763 TFRCP02786 760 aaKnown RBP22.19■■□□□ 1.14
DDX55-207ENST00000540763 CST5P28325 142 aaPredicted RBP22.19■■□□□ 1.14
DDX55-207ENST00000540763 ICAM3P32942 547 aa22.19■■□□□ 1.14
DDX55-207ENST00000540763 CCDC62Q6P9F0 684 aa22.19■■□□□ 1.14
DDX55-207ENST00000540763 FAM184AQ8NB25 1140 aa22.19■■□□□ 1.14
DDX55-207ENST00000540763 ARRDC4Q8NCT1 418 aa22.19■■□□□ 1.14
DDX55-207ENST00000540763 KCNJ14Q9UNX9 436 aa22.19■■□□□ 1.14
DDX55-207ENST00000540763 SYNRGQ9UMZ2 1314 aa22.19■■□□□ 1.14
DDX55-207ENST00000540763 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.18■■□□□ 1.14
DDX55-207ENST00000540763 ADAMTS4O75173 837 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 MMP1P03956 469 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 CYP3A4P08684 503 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 SMPD1P17405 629 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 GJA9P57773 515 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 ARHGAP4P98171 946 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 TLK2Q86UE8 772 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 NLRX1Q86UT6 975 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 GPRASP2Q96D09 838 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 CDHR1Q96JP9 859 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 SPC25Q9HBM1 224 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 UBIAD1Q9Y5Z9 338 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 CEP290O15078 2479 aa22.18■■□□□ 1.14
DDX55-207ENST00000540763 DNM1LO00429 736 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 ADAMTS3O15072 1205 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 MAFGO15525 162 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 FIBPO43427 364 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 DTNBO60941 627 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 TXNP10599 105 aaKnown RBP22.17■■□□□ 1.14
DDX55-207ENST00000540763 ANO1Q5XXA6 986 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 KRT40Q6A162 431 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 SEPT14Q6ZU15 432 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 NIPA1Q7RTP0 329 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 KRT25Q7Z3Z0 450 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 RNF180Q86T96 592 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 RASGRP4Q8TDF6 673 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 INTS4Q96HW7 963 aaKnown RBP22.17■■□□□ 1.14
DDX55-207ENST00000540763 PGBD1Q96JS3 809 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 C8orf76Q96K31 380 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 MRVI1Q9Y6F6 885 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 DOCK5Q9H7D0 1870 aa22.17■■□□□ 1.14
DDX55-207ENST00000540763 KRT2P35908 639 aa22.16■■□□□ 1.14
DDX55-207ENST00000540763 HSCBQ8IWL3 235 aa22.16■■□□□ 1.14
DDX55-207ENST00000540763 LENG1Q96BZ8 264 aaPredicted RBP22.16■■□□□ 1.14
DDX55-207ENST00000540763 GJB4Q9NTQ9 266 aa22.16■■□□□ 1.14
DDX55-207ENST00000540763 DDX41Q9UJV9 622 aaKnown RBP22.16■■□□□ 1.14
DDX55-207ENST00000540763 SPATA31C2B4DYI2 1134 aa22.15■■□□□ 1.14
DDX55-207ENST00000540763 ARIH2O95376 493 aa22.15■■□□□ 1.14
DDX55-207ENST00000540763 USP11P51784 963 aa22.15■■□□□ 1.14
DDX55-207ENST00000540763 LRRC41Q15345 812 aa22.15■■□□□ 1.14
DDX55-207ENST00000540763 UBE2Q1Q7Z7E8 422 aa22.15■■□□□ 1.14
DDX55-207ENST00000540763 KLHDC9Q8NEP7 349 aa22.15■■□□□ 1.14
DDX55-207ENST00000540763 FBXO18Q8NFZ0 1043 aa22.15■■□□□ 1.14
DDX55-207ENST00000540763 EMID1Q96A84 441 aaPredicted RBP22.15■■□□□ 1.14
DDX55-207ENST00000540763 SENP7Q9BQF6 1050 aa22.15■■□□□ 1.14
DDX55-207ENST00000540763 MXRA8Q9BRK3 442 aa22.15■■□□□ 1.14
DDX55-207ENST00000540763 TSEN34Q9BSV6 310 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms