RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 GYS2P54840 703 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 CACNB1Q02641 598 aaPredicted RBP12.84□□□□□ -0.35
C11orf54-214ENST00000540113 EN1Q05925 392 aaPredicted RBP12.84□□□□□ -0.35
C11orf54-214ENST00000540113 SLC15A2Q16348 729 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 TSR1Q2NL82 804 aaKnown RBP12.84□□□□□ -0.35
C11orf54-214ENST00000540113 DACT2Q5SW24 774 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 CCDC122Q5T0U0 273 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 PODNQ7Z5L7 613 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 CCDC155Q8N6L0 562 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 BBXQ8WY36 941 aaPredicted RBP12.84□□□□□ -0.35
C11orf54-214ENST00000540113 LARP4BQ92615 738 aaKnown RBP12.84□□□□□ -0.35
C11orf54-214ENST00000540113 TTYH3Q9C0H2 523 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 ARFGAP3Q9NP61 516 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 FAM198AQ9UFP1 575 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 PNMA6FA0A0J9YX94 578 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 BICDL2A1A5D9 508 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 DDTLA6NHG4 134 aaPredicted RBP12.84□□□□□ -0.35
C11orf54-214ENST00000540113 USP17L15C9J2P7 530 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 USP17L13C9JLJ4 530 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 USP17L11C9JVI0 530 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 USP17L18D6R9N7 530 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 USP17L22D6RA61 530 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 USP17L17D6RBQ6 530 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 USP17L19D6RCP7 530 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 USP17L20D6RJB6 530 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 ATP1A1P05023 1023 aaKnown RBP12.84□□□□□ -0.35
C11orf54-214ENST00000540113 SSBP05455 408 aaKnown RBP eCLIP12.84□□□□□ -0.35
C11orf54-214ENST00000540113 HLA-DOAP06340 250 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 RAD51AP2Q09MP3 1159 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 USP17L24Q0WX57 530 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 USP17L6PQ6QN14 398 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 SH3BP5LQ7L8J4 393 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 KRT26Q7Z3Y9 468 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 CAPZA3Q96KX2 299 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 NHEJ1Q9H9Q4 299 aaPredicted RBP12.84□□□□□ -0.35
C11orf54-214ENST00000540113 FAM207AQ9NSI2 230 aaPredicted RBP12.84□□□□□ -0.35
C11orf54-214ENST00000540113 MYO6Q9UM54 1294 aa12.84□□□□□ -0.35
C11orf54-214ENST00000540113 MARCH6O60337 910 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 ECE2O60344 883 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 AMPD3Q01432 767 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 ORC2Q13416 577 aaPredicted RBP12.83□□□□□ -0.35
C11orf54-214ENST00000540113 LONRF2Q1L5Z9 754 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 CNNM4Q6P4Q7 775 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 KIAA1328Q86T90 577 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 CEP112Q8N8E3 955 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 SMCR8Q8TEV9 937 aaPredicted RBP12.83□□□□□ -0.35
C11orf54-214ENST00000540113 DDX12PQ92771 950 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 MTMR8Q96EF0 704 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 FUT8Q9BYC5 575 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 FGFBP2Q9BYJ0 223 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 MAGEF1Q9HAY2 307 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 RIC8AQ9NPQ8 531 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 STK32BQ9NY57 414 aa12.83□□□□□ -0.35
C11orf54-214ENST00000540113 NPHP3-ACAD11A0A0J9YXS1 232 aa12.83□□□□□ -0.36
C11orf54-214ENST00000540113 CLK2P49760 499 aaKnown RBP12.83□□□□□ -0.36
C11orf54-214ENST00000540113 TMEM266Q2M3C6 531 aa12.83□□□□□ -0.36
C11orf54-214ENST00000540113 RAD54LQ92698 747 aa12.83□□□□□ -0.36
C11orf54-214ENST00000540113 HAS1Q92839 578 aa12.83□□□□□ -0.36
C11orf54-214ENST00000540113 DDX25Q9UHL0 483 aaKnown RBP12.83□□□□□ -0.36
C11orf54-214ENST00000540113 MACROD2A1Z1Q3 448 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 OAS2P29728 719 aaKnown RBP12.82□□□□□ -0.36
C11orf54-214ENST00000540113 CHRNA5P30532 468 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
C11orf54-214ENST00000540113 AMPD2Q01433 879 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 STRIP1Q5VSL9 837 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 PPP1R18Q6NYC8 613 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 NOC3LQ8WTT2 800 aaKnown RBP12.82□□□□□ -0.36
C11orf54-214ENST00000540113 JAKMIP2Q96AA8 810 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 HINFPQ9BQA5 517 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 TMX4Q9H1E5 349 aaPredicted RBP12.82□□□□□ -0.36
C11orf54-214ENST00000540113 KANSL2Q9H9L4 492 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 CTAGE15A4D2H0 777 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 E9PMD0 336 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 ZNF263O14978 683 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 CTAGE8P0CG41 777 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 VSNL1P62760 191 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 KRT79Q5XKE5 535 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 CENPPQ6IPU0 288 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 STYK1Q6J9G0 422 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 UNC13DQ70J99 1090 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 CTAGE6Q86UF2 777 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 CTAGE4Q8IX94 777 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 MMRN2Q9H8L6 949 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 ABCB6Q9NP58 842 aa12.82□□□□□ -0.36
C11orf54-214ENST00000540113 ZNF185O15231 689 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 EEF2P13639 858 aaKnown RBP12.81□□□□□ -0.36
C11orf54-214ENST00000540113 STAT3P40763 770 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 BAG6P46379 1132 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 RBM5P52756 815 aaKnown RBP eCLIP12.81□□□□□ -0.36
C11orf54-214ENST00000540113 SF3B2Q13435 895 aaKnown RBP12.81□□□□□ -0.36
C11orf54-214ENST00000540113 SMC1AQ14683 1233 aaKnown RBP12.81□□□□□ -0.36
C11orf54-214ENST00000540113 MEA1Q16626 185 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 GPATCH4Q5T3I0 446 aaKnown RBP12.81□□□□□ -0.36
C11orf54-214ENST00000540113 SIAH1Q8IUQ4 282 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 MMS19Q96T76 1030 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 IDI2Q9BXS1 227 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 PSTPIP2Q9H939 334 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 H3BQF6 201 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 ZBTB5O15062 677 aa12.81□□□□□ -0.36
C11orf54-214ENST00000540113 FKBP1AP62942 108 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms