RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 FBXL7Q9UJT9 491 aa8.72□□□□□ -1.01
CCDC7-209ENST00000539197 STRIP2Q9ULQ0 834 aa8.72□□□□□ -1.01
CCDC7-209ENST00000539197 INSRRP14616 1297 aa8.71□□□□□ -1.02
CCDC7-209ENST00000539197 NCAPHQ15003 741 aa8.71□□□□□ -1.02
CCDC7-209ENST00000539197 SF1Q15637 639 aaKnown RBP8.71□□□□□ -1.02
CCDC7-209ENST00000539197 C6orf15Q6UXA7 325 aaPredicted RBP8.71□□□□□ -1.02
CCDC7-209ENST00000539197 CD300LDQ6UXZ3 194 aa8.71□□□□□ -1.02
CCDC7-209ENST00000539197 CYP26B1Q9NR63 512 aa8.71□□□□□ -1.02
CCDC7-209ENST00000539197 ITGB3P05106 788 aa8.7□□□□□ -1.02
CCDC7-209ENST00000539197 MAGEA10P43363 369 aaPredicted RBP8.7□□□□□ -1.02
CCDC7-209ENST00000539197 NLRP10Q86W26 655 aa8.7□□□□□ -1.02
CCDC7-209ENST00000539197 SEC14L1Q92503 715 aa8.7□□□□□ -1.02
CCDC7-209ENST00000539197 TGIF2Q9GZN2 237 aa8.7□□□□□ -1.02
CCDC7-209ENST00000539197 MYRFQ9Y2G1 1151 aa8.7□□□□□ -1.02
CCDC7-209ENST00000539197 SMAD7O15105 426 aaKnown RBP8.69□□□□□ -1.02
CCDC7-209ENST00000539197 RPL13P26373 211 aaKnown RBP8.69□□□□□ -1.02
CCDC7-209ENST00000539197 THBS2P35442 1172 aa8.69□□□□□ -1.02
CCDC7-209ENST00000539197 STAT5AP42229 794 aa8.69□□□□□ -1.02
CCDC7-209ENST00000539197 PRSS53Q2L4Q9 553 aa8.69□□□□□ -1.02
CCDC7-209ENST00000539197 IQCEQ6IPM2 695 aa8.69□□□□□ -1.02
CCDC7-209ENST00000539197 ZC3H18Q86VM9 953 aaKnown RBP8.69□□□□□ -1.02
CCDC7-209ENST00000539197 MIB1Q86YT6 1006 aa8.69□□□□□ -1.02
CCDC7-209ENST00000539197 KYQ8NBH2 561 aa8.69□□□□□ -1.02
CCDC7-209ENST00000539197 ITGAVP06756 1048 aa8.68□□□□□ -1.02
CCDC7-209ENST00000539197 ATF4P18848 351 aaPredicted RBP8.68□□□□□ -1.02
CCDC7-209ENST00000539197 BCL6P41182 706 aa8.68□□□□□ -1.02
CCDC7-209ENST00000539197 ECI1P42126 302 aa8.68□□□□□ -1.02
CCDC7-209ENST00000539197 KIAA2012Q0VF49 1180 aa8.68□□□□□ -1.02
CCDC7-209ENST00000539197 PUM1Q14671 1186 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC7-209ENST00000539197 RGL3Q3MIN7 710 aa8.68□□□□□ -1.02
CCDC7-209ENST00000539197 CEP68Q76N32 757 aa8.68□□□□□ -1.02
CCDC7-209ENST00000539197 MILR1Q7Z6M3 343 aa8.68□□□□□ -1.02
CCDC7-209ENST00000539197 TTLL6Q8N841 843 aa8.68□□□□□ -1.02
CCDC7-209ENST00000539197 RBM15Q96T37 977 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC7-209ENST00000539197 SMPD4Q9NXE4 827 aa8.68□□□□□ -1.02
CCDC7-209ENST00000539197 SLC6A11P48066 632 aa8.67□□□□□ -1.02
CCDC7-209ENST00000539197 ITGA1P56199 1179 aa8.67□□□□□ -1.02
CCDC7-209ENST00000539197 RPL11P62913 178 aaKnown RBP8.67□□□□□ -1.02
CCDC7-209ENST00000539197 LARP1BQ659C4 914 aaKnown RBP8.67□□□□□ -1.02
CCDC7-209ENST00000539197 MICAL1Q8TDZ2 1067 aa8.67□□□□□ -1.02
CCDC7-209ENST00000539197 CCSER2Q9H7U1 834 aa8.67□□□□□ -1.02
CCDC7-209ENST00000539197 TIMM13Q9Y5L4 95 aaPredicted RBP8.67□□□□□ -1.02
CCDC7-209ENST00000539197 LCP1P13796 627 aa8.66□□□□□ -1.02
CCDC7-209ENST00000539197 SV2CQ496J9 727 aa8.66□□□□□ -1.02
CCDC7-209ENST00000539197 FAM26FQ5R3K3 315 aa8.66□□□□□ -1.02
CCDC7-209ENST00000539197 MROH9Q5TGP6 573 aa8.66□□□□□ -1.02
CCDC7-209ENST00000539197 MCTP2Q6DN12 878 aa8.66□□□□□ -1.02
CCDC7-209ENST00000539197 ZNF227Q86WZ6 799 aa8.66□□□□□ -1.02
CCDC7-209ENST00000539197 KREMEN2Q8NCW0 462 aa8.66□□□□□ -1.02
CCDC7-209ENST00000539197 TMPRSS5Q9H3S3 457 aa8.66□□□□□ -1.02
CCDC7-209ENST00000539197 PLATP00750 562 aa8.65□□□□□ -1.02
CCDC7-209ENST00000539197 SNRPB2P08579 225 aaKnown RBP8.65□□□□□ -1.02
CCDC7-209ENST00000539197 CR1LQ2VPA4 569 aa8.65□□□□□ -1.02
CCDC7-209ENST00000539197 E4F1Q66K89 784 aaPredicted RBP8.65□□□□□ -1.02
CCDC7-209ENST00000539197 MRM1Q6IN84 353 aaKnown RBP8.65□□□□□ -1.02
CCDC7-209ENST00000539197 DENND5AQ6IQ26 1287 aa8.65□□□□□ -1.02
CCDC7-209ENST00000539197 FAM124AQ86V42 546 aa8.65□□□□□ -1.02
CCDC7-209ENST00000539197 RIOX2Q8IUF8 465 aa8.65□□□□□ -1.02
CCDC7-209ENST00000539197 FAM178BQ8IXR5 827 aa8.65□□□□□ -1.02
CCDC7-209ENST00000539197 FAM126BQ8IXS8 530 aa8.65□□□□□ -1.02
CCDC7-209ENST00000539197 LGI4Q8N135 537 aa8.65□□□□□ -1.02
CCDC7-209ENST00000539197 RCBTB1Q8NDN9 531 aa8.65□□□□□ -1.02
CCDC7-209ENST00000539197 DIO2Q92813 273 aa8.65□□□□□ -1.02
CCDC7-209ENST00000539197 NGRNQ9NPE2 291 aaKnown RBP8.65□□□□□ -1.02
CCDC7-209ENST00000539197 X6R8D5 127 aa8.65□□□□□ -1.02
CCDC7-209ENST00000539197 DDX3XO00571 662 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC7-209ENST00000539197 MYO1BO43795 1136 aa8.64□□□□□ -1.03
CCDC7-209ENST00000539197 GTF2A2P52657 109 aa8.64□□□□□ -1.03
CCDC7-209ENST00000539197 ADAM17P78536 824 aa8.64□□□□□ -1.03
CCDC7-209ENST00000539197 TBC1D10BQ4KMP7 808 aaPredicted RBP8.64□□□□□ -1.03
CCDC7-209ENST00000539197 PRR31Q5SQ13 230 aa8.64□□□□□ -1.03
CCDC7-209ENST00000539197 BORAQ6PGQ7 559 aa8.64□□□□□ -1.03
CCDC7-209ENST00000539197 TRMT2BQ96GJ1 504 aaKnown RBP8.64□□□□□ -1.03
CCDC7-209ENST00000539197 MROH6A6NGR9 719 aa8.63□□□□□ -1.03
CCDC7-209ENST00000539197 Q8N1Y9 231 aa8.63□□□□□ -1.03
CCDC7-209ENST00000539197 LOXL4Q96JB6 756 aa8.63□□□□□ -1.03
CCDC7-209ENST00000539197 YIPF4Q9BSR8 244 aa8.63□□□□□ -1.03
CCDC7-209ENST00000539197 ACTR10Q9NZ32 417 aa8.63□□□□□ -1.03
CCDC7-209ENST00000539197 LRP2BPQ9P2M1 347 aa8.63□□□□□ -1.03
CCDC7-209ENST00000539197 INVSQ9Y283 1065 aa8.63□□□□□ -1.03
CCDC7-209ENST00000539197 MEFVO15553 781 aaPredicted RBP8.62□□□□□ -1.03
CCDC7-209ENST00000539197 SUSD5O60279 629 aa8.62□□□□□ -1.03
CCDC7-209ENST00000539197 HOXC12P31275 282 aa8.62□□□□□ -1.03
CCDC7-209ENST00000539197 ETFBP38117 255 aa8.62□□□□□ -1.03
CCDC7-209ENST00000539197 KCNAB2Q13303 367 aa8.62□□□□□ -1.03
CCDC7-209ENST00000539197 ADAM9Q13443 819 aa8.62□□□□□ -1.03
CCDC7-209ENST00000539197 TXNDC5Q8NBS9 432 aaKnown RBP8.62□□□□□ -1.03
CCDC7-209ENST00000539197 ARRDC4Q8NCT1 418 aa8.62□□□□□ -1.03
CCDC7-209ENST00000539197 TMEM169Q96HH4 297 aa8.62□□□□□ -1.03
CCDC7-209ENST00000539197 ZSWIM3Q96MP5 696 aa8.62□□□□□ -1.03
CCDC7-209ENST00000539197 SAMD11Q96NU1 681 aa8.62□□□□□ -1.03
CCDC7-209ENST00000539197 KRTAP3-1Q9BYR8 98 aa8.62□□□□□ -1.03
CCDC7-209ENST00000539197 COA3Q9Y2R0 106 aaPredicted RBP8.62□□□□□ -1.03
CCDC7-209ENST00000539197 KCNJ6P48051 423 aa8.61□□□□□ -1.03
CCDC7-209ENST00000539197 NKX3-2P78367 333 aa8.61□□□□□ -1.03
CCDC7-209ENST00000539197 TTC9BQ8N6N2 239 aa8.61□□□□□ -1.03
CCDC7-209ENST00000539197 TMEM145Q8NBT3 493 aa8.61□□□□□ -1.03
CCDC7-209ENST00000539197 WASF3Q9UPY6 502 aa8.61□□□□□ -1.03
CCDC7-209ENST00000539197 PCDHA2Q9Y5H9 948 aa8.61□□□□□ -1.03
CCDC7-209ENST00000539197 DDAH1O94760 285 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms