RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 TIPINQ9BVW5 301 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 FAM192AQ9GZU8 254 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 CARD9Q9H257 536 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 VCX3BQ9H321 246 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 VCX3AQ9NNX9 186 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 UTP6Q9NYH9 597 aaKnown RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 CIDEBQ9UHD4 219 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 SLC4A7Q9Y6M7 1214 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 DIP2AQ14689 1571 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 ABCC12Q96J65 1359 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 SEMA3EO15041 775 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 HEXIM1O94992 359 aaKnown RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 CD44P16070 742 aaKnown RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 CALB2P22676 271 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 RAD23BP54727 409 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 STX17P56962 302 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 ZC3H6P61129 1189 aaKnown RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 EXOSC10Q01780 885 aaKnown RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 BNIP1Q12981 228 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 LSAMPQ13449 338 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 TRIM14Q14142 442 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 NFRKBQ6P4R8 1299 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 WDR59Q6PJI9 974 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 CCNJLQ8IV13 435 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 GRAMD1CQ8IYS0 662 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 FBF1Q8TES7 1133 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 CENPTQ96BT3 561 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 FSD1Q9BTV5 496 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 RAB17Q9H0T7 212 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 RNPEPL1Q9HAU8 725 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 INIPQ9NRY2 104 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 CTNNAL1Q9UBT7 734 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 PAIP2BQ9ULR5 123 aaKnown RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 NOVA2Q9UNW9 492 aaKnown RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 MYH8P13535 1937 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 RGPD8O14715 1765 aaPredicted RBP8.54□□□□□ -1.04
PTPRK-219ENST00000531050 ARHGAP23Q9P227 1491 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 PIK3C2AO00443 1686 aa8.54□□□□□ -1.04
PTPRK-219ENST00000531050 MACROD2A1Z1Q3 448 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 PEX11AO75192 247 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 CYP1A1P04798 512 aaPredicted RBP8.53□□□□□ -1.04
PTPRK-219ENST00000531050 TPBGLP0DKB5 382 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 SERPINB4P48594 390 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 OXCT1P55809 520 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 COPS2P61201 443 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 MAGOHP61326 146 aaKnown RBP8.53□□□□□ -1.04
PTPRK-219ENST00000531050 KRT83P78385 493 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 ADCY1Q08828 1119 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 KRT31Q15323 416 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 P3H1Q32P28 736 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 ODF2Q5BJF6 829 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 DUS1LQ6P1R4 473 aaKnown RBP8.53□□□□□ -1.04
PTPRK-219ENST00000531050 CEP128Q6ZU80 1094 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 LRRC34Q8IZ02 419 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 ASAP3Q8TDY4 903 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 DNAJC9Q8WXX5 260 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 MAGOHBQ96A72 148 aaKnown RBP8.53□□□□□ -1.04
PTPRK-219ENST00000531050 MAP3K14Q99558 947 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 SCOCQ9UIL1 159 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 TRIM33Q9UPN9 1127 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 SYNRGQ9UMZ2 1314 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 hCG_2014768A0A024R1R8 64 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.53□□□□□ -1.04
PTPRK-219ENST00000531050 CEP104O60308 925 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 CTNND1O60716 968 aaKnown RBP8.53□□□□□ -1.04
PTPRK-219ENST00000531050 SUPT3HO75486 399 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 SHBGP04278 402 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 CXCR5P32302 372 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 RC3H1Q5TC82 1133 aaKnown RBP8.53□□□□□ -1.04
PTPRK-219ENST00000531050 SAPCD2Q86UD0 394 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 ATP11CQ8NB49 1132 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 SLC17A8Q8NDX2 589 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 SPATA20Q8TB22 786 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 TEKT1Q969V4 418 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 ZNF274Q96GC6 653 aaPredicted RBP8.53□□□□□ -1.04
PTPRK-219ENST00000531050 PBKQ96KB5 322 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 HAPLN3Q96S86 360 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 DNAJC7Q99615 494 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 ELAC2Q9BQ52 826 aaKnown RBP8.53□□□□□ -1.04
PTPRK-219ENST00000531050 UBA5Q9GZZ9 404 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 TRPV5Q9NQA5 729 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 LRRC37A3O60309 1634 aa8.53□□□□□ -1.04
PTPRK-219ENST00000531050 PXDNLA1KZ92 1463 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 TTC26A0AVF1 554 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 SH2B2O14492 632 aaPredicted RBP8.52□□□□□ -1.04
PTPRK-219ENST00000531050 VARSP26640 1264 aaKnown RBP8.52□□□□□ -1.04
PTPRK-219ENST00000531050 GBP1P32455 592 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 CCNFP41002 786 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 CACNA2D1P54289 1103 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 NLRP5P59047 1200 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 KLHL10Q6JEL2 608 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 SEPT14Q6ZU15 432 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.52□□□□□ -1.04
PTPRK-219ENST00000531050 ATP8B4Q8TF62 1192 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 UTP4Q969X6 686 aaKnown RBP8.52□□□□□ -1.04
PTPRK-219ENST00000531050 RMDN2Q96LZ7 410 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 PSMB7Q99436 277 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 MTFR1LQ9H019 292 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 ABCF2Q9UG63 623 aa8.52□□□□□ -1.04
PTPRK-219ENST00000531050 LIMA1Q9UHB6 759 aaKnown RBP8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms