RNA–Protein interactions for RNA: ENST00000530624.5

CTSB-218, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-218ENST00000530624 DDX41Q9UJV9 622 aaKnown RBP16.61■□□□□ 0.25
CTSB-218ENST00000530624 GRIN2DO15399 1336 aa16.61■□□□□ 0.25
CTSB-218ENST00000530624 CNTNAP5Q8WYK1 1306 aa16.61■□□□□ 0.25
CTSB-218ENST00000530624 KLF18A0A0U1RQI7 1052 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 RGS20O76081 388 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 GH1P01241 217 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 CD4P01730 458 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 TGFB3P10600 412 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 RPS6KB1P23443 525 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 CCND2P30279 289 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 EVCP57679 992 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 ARHGAP1Q07960 439 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 LRIT3Q3SXY7 679 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 XRRA1Q6P2D8 792 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 SEPT14Q6ZU15 432 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 RAB11FIP4Q86YS3 637 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 PIBF1Q8WXW3 757 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 MTG1Q9BT17 334 aaPredicted RBP16.6■□□□□ 0.25
CTSB-218ENST00000530624 FAM217BQ9NTX9 383 aaPredicted RBP16.6■□□□□ 0.25
CTSB-218ENST00000530624 TMEM39AQ9NV64 488 aa16.6■□□□□ 0.25
CTSB-218ENST00000530624 CCDC196A0A1B0GTZ2 297 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 hCG_1984214I3L0E3 225 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 TLR3O15455 904 aaKnown RBP16.59■□□□□ 0.25
CTSB-218ENST00000530624 RAG1P15918 1043 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 LY6KQ17RY6 165 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 PPP1R18Q6NYC8 613 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 Q6ZUG5 572 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 FCHSD1Q86WN1 690 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 ZNF713Q8N859 430 aaPredicted RBP16.59■□□□□ 0.25
CTSB-218ENST00000530624 IL31RAQ8NI17 732 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 COPS5Q92905 334 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 BADQ92934 168 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 CUL5Q93034 780 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 TM6SF1Q9BZW5 370 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 ZSWIM6Q9HCJ5 1215 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 MRVI1Q9Y6F6 885 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 SZT2Q5T011 3432 aa16.59■□□□□ 0.25
CTSB-218ENST00000530624 GOLGA8AA7E2F4 631 aa16.58■□□□□ 0.24
CTSB-218ENST00000530624 GOLGA8BA8MQT2 603 aa16.58■□□□□ 0.24
CTSB-218ENST00000530624 TIMP1P01033 207 aa16.58■□□□□ 0.24
CTSB-218ENST00000530624 CPA1P15085 419 aa16.58■□□□□ 0.24
CTSB-218ENST00000530624 CASTP20810 708 aaKnown RBP16.58■□□□□ 0.24
CTSB-218ENST00000530624 ITGB8P26012 769 aa16.58■□□□□ 0.24
CTSB-218ENST00000530624 FGD1P98174 961 aa16.58■□□□□ 0.24
CTSB-218ENST00000530624 USP17L6PQ6QN14 398 aa16.58■□□□□ 0.24
CTSB-218ENST00000530624 CCDC82Q8N4S0 544 aa16.58■□□□□ 0.24
CTSB-218ENST00000530624 SMARCC2Q8TAQ2 1214 aa16.58■□□□□ 0.24
CTSB-218ENST00000530624 INPP4AQ96PE3 977 aaPredicted RBP16.58■□□□□ 0.24
CTSB-218ENST00000530624 PSTPIP2Q9H939 334 aa16.58■□□□□ 0.24
CTSB-218ENST00000530624 SCN10AQ9Y5Y9 1956 aa16.58■□□□□ 0.24
CTSB-218ENST00000530624 MMP3P08254 477 aa16.57■□□□□ 0.24
CTSB-218ENST00000530624 MYCLP12524 364 aaPredicted RBP16.57■□□□□ 0.24
CTSB-218ENST00000530624 HOXD8P13378 290 aaPredicted RBP16.57■□□□□ 0.24
CTSB-218ENST00000530624 CDC27P30260 824 aa16.57■□□□□ 0.24
CTSB-218ENST00000530624 ICAM3P32942 547 aa16.57■□□□□ 0.24
CTSB-218ENST00000530624 MRPS9P82933 396 aaKnown RBP16.57■□□□□ 0.24
CTSB-218ENST00000530624 PTPN11Q06124 597 aaPredicted RBP16.57■□□□□ 0.24
CTSB-218ENST00000530624 LAMC2Q13753 1193 aa16.57■□□□□ 0.24
CTSB-218ENST00000530624 PCNX4Q63HM2 1172 aa16.57■□□□□ 0.24
CTSB-218ENST00000530624 GPR153Q6NV75 609 aa16.57■□□□□ 0.24
CTSB-218ENST00000530624 RUFY3Q7L099 469 aa16.57■□□□□ 0.24
CTSB-218ENST00000530624 PPTC7Q8NI37 304 aa16.57■□□□□ 0.24
CTSB-218ENST00000530624 BRF1Q92994 677 aa16.57■□□□□ 0.24
CTSB-218ENST00000530624 PCDH10Q9P2E7 1040 aa16.57■□□□□ 0.24
CTSB-218ENST00000530624 LAMA2P24043 3122 aaKnown RBP16.56■□□□□ 0.24
CTSB-218ENST00000530624 EIF5BO60841 1220 aaKnown RBP16.56■□□□□ 0.24
CTSB-218ENST00000530624 MYL3P08590 195 aa16.56■□□□□ 0.24
CTSB-218ENST00000530624 METAP2P50579 478 aaKnown RBP eCLIP16.56■□□□□ 0.241e-6■□□□□ 10.5
CTSB-218ENST00000530624 PSMC6P62333 389 aa16.56■□□□□ 0.24
CTSB-218ENST00000530624 APOBRQ0VD83 1088 aa16.56■□□□□ 0.24
CTSB-218ENST00000530624 GNPTABQ3T906 1256 aa16.56■□□□□ 0.24
CTSB-218ENST00000530624 MYSM1Q5VVJ2 828 aa16.56■□□□□ 0.24
CTSB-218ENST00000530624 WWC2Q6AWC2 1192 aa16.56■□□□□ 0.24
CTSB-218ENST00000530624 MFSD5Q6N075 450 aa16.56■□□□□ 0.24
CTSB-218ENST00000530624 NFRKBQ6P4R8 1299 aa16.56■□□□□ 0.24
CTSB-218ENST00000530624 AFG1LQ8WV93 481 aa16.56■□□□□ 0.24
CTSB-218ENST00000530624 ALDH8A1Q9H2A2 487 aaPredicted RBP16.56■□□□□ 0.24
CTSB-218ENST00000530624 BARHL2Q9NY43 387 aa16.56■□□□□ 0.24
CTSB-218ENST00000530624 hCG_1642624A0A1W2PR95 340 aa16.55■□□□□ 0.24
CTSB-218ENST00000530624 UBA1P22314 1058 aaKnown RBP16.55■□□□□ 0.24
CTSB-218ENST00000530624 ADD1P35611 737 aaKnown RBP16.55■□□□□ 0.24
CTSB-218ENST00000530624 DGKDQ16760 1214 aa16.55■□□□□ 0.24
CTSB-218ENST00000530624 CELF3Q5SZQ8 465 aaKnown RBP16.55■□□□□ 0.24
CTSB-218ENST00000530624 HEATR3Q7Z4Q2 680 aa16.55■□□□□ 0.24
CTSB-218ENST00000530624 SESTD1Q86VW0 696 aa16.55■□□□□ 0.24
CTSB-218ENST00000530624 DHX37Q8IY37 1157 aaKnown RBP16.55■□□□□ 0.24
CTSB-218ENST00000530624 GLT8D2Q9H1C3 349 aa16.55■□□□□ 0.24
CTSB-218ENST00000530624 CYP46A1Q9Y6A2 500 aa16.55■□□□□ 0.24
CTSB-218ENST00000530624 V9GY48 417 aaPredicted RBP16.55■□□□□ 0.24
CTSB-218ENST00000530624 SPATA31C2B4DYI2 1134 aa16.54■□□□□ 0.24
CTSB-218ENST00000530624 SOX1O00570 391 aaPredicted RBP16.54■□□□□ 0.24
CTSB-218ENST00000530624 FIBPO43427 364 aa16.54■□□□□ 0.24
CTSB-218ENST00000530624 B4GALT4O60513 344 aa16.54■□□□□ 0.24
CTSB-218ENST00000530624 PPFIA4O75335 1185 aa16.54■□□□□ 0.24
CTSB-218ENST00000530624 SUPT20HL2P0C7V6 817 aa16.54■□□□□ 0.24
CTSB-218ENST00000530624 ANAPC15P60006 121 aa16.54■□□□□ 0.24
CTSB-218ENST00000530624 SP2Q02086 613 aa16.54■□□□□ 0.24
CTSB-218ENST00000530624 FPGSQ05932 587 aa16.54■□□□□ 0.24
CTSB-218ENST00000530624 TYW1BQ6NUM6 668 aa16.54■□□□□ 0.24
CTSB-218ENST00000530624 GPKOWQ92917 476 aaPredicted RBP eCLIP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms