RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 LY6KQ17RY6 165 aa20.35■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 KCNV1Q6PIU1 500 aa20.35■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 TBC1D5Q92609 795 aa20.35■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 FTOQ9C0B1 505 aaKnown RBP eCLIP20.35■□□□□ 0.852e-10■■□□□ 12.3
CKLF-CMTM1-202ENST00000527845 VAT1LQ9HCJ6 419 aa20.35■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 PXMP2Q9NR77 195 aa20.35■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 MRVI1Q9Y6F6 885 aa20.35■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 VCANP13611 3396 aa20.34■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 CHD9Q3L8U1 2897 aa20.34■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 KIF28PB7ZC32 967 aa20.34■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 ZBTB5O15062 677 aa20.34■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 NR3C2P08235 984 aa20.34■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 LAMC2Q13753 1193 aa20.34■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 ADGRE1Q14246 886 aa20.34■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 PPM1EQ8WY54 764 aa20.34■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 MTMR8Q96EF0 704 aa20.34■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 YTHDC1Q96MU7 727 aaKnown RBP20.34■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 DDX41Q9UJV9 622 aaKnown RBP20.34■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 ERICH2A1L162 156 aa20.33■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 KLRF2D3W0D1 207 aa20.33■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 EIF2AK2P19525 551 aaKnown RBP20.33■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 CHMP4BP1P59074 171 aa20.33■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 RBL2Q08999 1139 aa20.33■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 SEC23AQ15436 765 aa20.33■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 PPTC7Q8NI37 304 aa20.33■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
CKLF-CMTM1-202ENST00000527845 MRPS5P82675 430 aaKnown RBP20.32■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 SART3Q15020 963 aaKnown RBP20.32■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 TTC22Q5TAA0 569 aa20.32■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 CHST3Q7LGC8 479 aa20.32■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 C7orf31Q8N865 590 aa20.32■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 IL27Q8NEV9 243 aa20.32■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 PDCD2LQ9BRP1 358 aa20.32■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 GTF2IRD1Q9UHL9 959 aa20.32■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 MAD2L2Q9UI95 211 aa20.32■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 SPTBN5Q9NRC6 3674 aaKnown RBP20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 PALM3A6NDB9 673 aaPredicted RBP20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 GTPBP6O43824 516 aaPredicted RBP20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 SELPP16109 830 aa20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 KCNJ6P48051 423 aa20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 GDF6Q6KF10 455 aaPredicted RBP20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 STOX1Q6ZVD7 989 aa20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 DHX37Q8IY37 1157 aaKnown RBP20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 STAG2Q8N3U4 1231 aa20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 KAT2BQ92831 832 aa20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 ASB2Q96Q27 587 aa20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 PRDM6Q9NQX0 595 aa20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 PCDHA1Q9Y5I3 950 aa20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 TRIP12Q14669 1992 aaPredicted RBP20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 MYH7BA7E2Y1 1941 aa20.31■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 TNFRSF10AO00220 468 aa20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 EFCAB14O75071 495 aa20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 F2P00734 622 aa20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 CA3P07451 260 aa20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 TGFB3P10600 412 aa20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 MYOGP15173 224 aa20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 POU3F3P20264 500 aaPredicted RBP20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 PSEN2P49810 448 aa20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 GRM4Q14833 912 aa20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 CYB5R4Q7L1T6 521 aa20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 LRRC8DQ7L1W4 858 aa20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 RALYLQ86SE5 291 aaKnown RBP20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 HERC6Q8IVU3 1022 aa20.3■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 TTC28Q96AY4 2481 aa20.29■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 OPLAHO14841 1288 aa20.29■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 HOXD8P13378 290 aaPredicted RBP20.29■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 CCND2P30279 289 aa20.29■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 PTK7Q13308 1070 aa20.29■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 MFSD10Q14728 455 aa20.29■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 CCDC85BQ15834 202 aaPredicted RBP20.29■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 AAK1Q2M2I8 961 aa20.29■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 CNKSR3Q6P9H4 555 aa20.29■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 PPP1R13LQ8WUF5 828 aa20.29■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 RIOX1Q9H6W3 641 aa20.29■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 GCOM1H8Y6P7 765 aaPredicted RBP20.28■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 IFIT3O14879 490 aaKnown RBP20.28■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 PPFIA4O75335 1185 aa20.28■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 POLR2MP0CAP2 368 aa20.28■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 MYCLP12524 364 aaPredicted RBP20.28■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 GSPT1P15170 499 aaKnown RBP20.28■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 PGM5Q15124 567 aa20.28■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 KIAA0753Q2KHM9 967 aa20.28■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 VSIG10LQ86VR7 867 aa20.28■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 NCOA7Q8NI08 942 aa20.28■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 IL25Q9H293 177 aa20.28■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 HDAC6Q9UBN7 1215 aa20.28■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 TET1Q8NFU7 2136 aa20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 HAS3O00219 553 aa20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 PPP1R11O60927 126 aaPredicted RBP20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 STAM2O75886 525 aa20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 CXCL10P02778 98 aa20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 CYP21A2P08686 494 aa20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 WTAPQ15007 396 aa20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 GNPTABQ3T906 1256 aa20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 CELF3Q5SZQ8 465 aaKnown RBP20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 MYSM1Q5VVJ2 828 aa20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 HOMER1Q86YM7 354 aa20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 CTAGE1Q96RT6 745 aa20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 ALG1Q9BT22 464 aa20.27■□□□□ 0.84
CKLF-CMTM1-202ENST00000527845 CHD7Q9P2D1 2997 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms