RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 RIOX1Q9H6W3 641 aa13.66□□□□□ -0.22
CTNNA1-237ENST00000523275 NOD1Q9Y239 953 aa13.66□□□□□ -0.22
CTNNA1-237ENST00000523275 ZBBXA8MT70 800 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 MYCLP12524 364 aaPredicted RBP13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 HOXA13P31271 388 aaPredicted RBP13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 RFC2P35250 354 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 TROAPQ12815 778 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 BFSP2Q13515 415 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 LAMC2Q13753 1193 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 WTAPQ15007 396 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 PTGISQ16647 500 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 DGKDQ16760 1214 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 SLC35G1Q2M3R5 365 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 DEFB128Q7Z7B8 93 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 HOMER1Q86YM7 354 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 MAP4K1Q92918 833 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 EMID1Q96A84 441 aaPredicted RBP13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 PIGSQ96S52 555 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 GAS2L1Q99501 681 aaPredicted RBP13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 PDCD2LQ9BRP1 358 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 NKX2-4Q9H2Z4 354 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 PRDM12Q9H4Q4 367 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 SLC28A3Q9HAS3 691 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 SENP2Q9HC62 589 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 MRVI1Q9Y6F6 885 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 TAF6LQ9Y6J9 622 aa13.65□□□□□ -0.22
CTNNA1-237ENST00000523275 SCN10AQ9Y5Y9 1956 aa13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 PNMA6FA0A0J9YX94 578 aa13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 GCOM1H8Y6P7 765 aaPredicted RBP13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 IQCF3P0C7M6 154 aa13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 ACTN1P12814 892 aa13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 ATP2A2P16615 1042 aaKnown RBP13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 TMEM67Q5HYA8 995 aa13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 KCNV1Q6PIU1 500 aa13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 CATIPQ7Z7H3 387 aa13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 VSIG10LQ86VR7 867 aa13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 SESTD1Q86VW0 696 aa13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 DHX37Q8IY37 1157 aaKnown RBP13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 KAT2BQ92831 832 aa13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 YBX2Q9Y2T7 364 aaKnown RBP13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 PCDHA11Q9Y5I1 949 aa13.64□□□□□ -0.23
CTNNA1-237ENST00000523275 CYTH3O43739 400 aa13.63□□□□□ -0.23
CTNNA1-237ENST00000523275 RGS20O76081 388 aa13.63□□□□□ -0.23
CTNNA1-237ENST00000523275 RABGGTBP53611 331 aa13.63□□□□□ -0.23
CTNNA1-237ENST00000523275 CCDC155Q8N6L0 562 aa13.63□□□□□ -0.23
CTNNA1-237ENST00000523275 PPTC7Q8NI37 304 aa13.63□□□□□ -0.23
CTNNA1-237ENST00000523275 IGDCC4Q8TDY8 1250 aa13.63□□□□□ -0.23
CTNNA1-237ENST00000523275 FTOQ9C0B1 505 aaKnown RBP eCLIP13.63□□□□□ -0.23
CTNNA1-237ENST00000523275 RBM8AQ9Y5S9 174 aaKnown RBP13.63□□□□□ -0.23
CTNNA1-237ENST00000523275 PPFIA4O75335 1185 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 TGFB3P10600 412 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 CCND2P30279 289 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 PSEN2P49810 448 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 ANTXR2P58335 489 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 PGM5Q15124 567 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 MYSM1Q5VVJ2 828 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 GDF6Q6KF10 455 aaPredicted RBP13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 FCHSD1Q86WN1 690 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 MB21D2Q8IYB1 491 aaPredicted RBP13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 C7orf31Q8N865 590 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 USP38Q8NB14 1042 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 CAGE1Q8TC20 777 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 CTAGE1Q96RT6 745 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 KATNAL1Q9BW62 490 aa13.62□□□□□ -0.23
CTNNA1-237ENST00000523275 MYOGP15173 224 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 ADGRE1Q14246 886 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 MFSD10Q14728 455 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 KIAA0753Q2KHM9 967 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 CELF3Q5SZQ8 465 aaKnown RBP13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 IL31RAQ8NI17 732 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 PHOSPHO2Q8TCD6 241 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 AFAP1L1Q8TED9 768 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 PIBF1Q8WXW3 757 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 PPM1EQ8WY54 764 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 SPATA33Q96N06 139 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 MAP3K14Q99558 947 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 ALG1Q9BT22 464 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 MTA3Q9BTC8 594 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 HDAC6Q9UBN7 1215 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 GTF2IRD1Q9UHL9 959 aa13.61□□□□□ -0.23
CTNNA1-237ENST00000523275 MYH6P13533 1939 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 HAS3O00219 553 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 GGPS1O95749 300 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 F2P00734 622 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 ZNF286BP0CG31 522 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 HOXD8P13378 290 aaPredicted RBP13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 SELPP16109 830 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 IGFBP4P22692 258 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 SMARCA1P28370 1054 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 KIF5BP33176 963 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 SP2Q02086 613 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 MYO9BQ13459 2157 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 PPP2R2DQ66LE6 453 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 CASC1Q6TDU7 716 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 ZNF654Q8IZM8 581 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 TMTC2Q8N394 836 aa13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 CTCFLQ8NI51 663 aaPredicted RBP13.6□□□□□ -0.23
CTNNA1-237ENST00000523275 RRP36Q96EU6 259 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms