RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SYNMO15061 1565 aa17.74■□□□□ 0.43
PCDHA3-201ENST00000522353 ATP8B3O60423 1300 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 SH2B2O14492 632 aaPredicted RBP17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 PPFIA1Q13136 1202 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 MAP7Q14244 749 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 HLFQ16534 295 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 MTERF2Q49AM1 385 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 ZNF589Q86UQ0 364 aaPredicted RBP17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 DCAF4Q8WV16 495 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 RNF181Q9P0P0 153 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 JCADQ9P266 1359 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 TXNRD1Q16881 649 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 FAM186BQ8IYM0 893 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 CDC42BPGQ6DT37 1551 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 MYO1FO00160 1098 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 EIF2AK2P19525 551 aaKnown RBP17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 MYO1EQ12965 1108 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 KRT12Q99456 494 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 TMEM63CQ9P1W3 806 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 IQCA1LA6NCM1 817 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 ADKP55263 362 aaKnown RBP17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 CD209Q9NNX6 404 aa17.73■□□□□ 0.43
PCDHA3-201ENST00000522353 TNS3Q68CZ2 1445 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 ECE2O60344 883 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 ZWINTO95229 277 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 GNAT1P11488 350 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 SEPT2Q15019 361 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 POLR3EQ9NVU0 708 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 IPO11Q9UI26 975 aaKnown RBP17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 HYOU1Q9Y4L1 999 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 CLIC4Q9Y696 253 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 ALCAMQ13740 583 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 DENND2CQ68D51 928 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 HAUS4Q9H6D7 363 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 PIH1D3Q9NQM4 214 aaKnown RBP17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 ZSWIM5Q9P217 1185 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 KCNK3O14649 394 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 LMNB1P20700 586 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 FKBP3Q00688 224 aaKnown RBP17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 WRNIP1Q96S55 665 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 TFAMQ00059 246 aaKnown RBP17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 AP3B2Q13367 1082 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 NEDD9Q14511 834 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 ADCK5Q3MIX3 580 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 RASEFQ8IZ41 740 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 MINPP1Q9UNW1 487 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 ABCC3O15438 1527 aa17.72■□□□□ 0.43
PCDHA3-201ENST00000522353 ESYT2A0FGR8 921 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 USP17L5A8MUK1 530 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 HOXD10P28358 340 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 WHAMMP3Q1A5X7 153 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 NSUN7Q8NE18 718 aaKnown RBP17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 ARHGEF1Q92888 912 aaKnown RBP17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 ELF1P32519 619 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 NDUFA8P51970 172 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 BFSP1Q12934 665 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 SYNE4Q8N205 404 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 GIMAP8Q8ND71 665 aaPredicted RBP17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 CNOT6LQ96LI5 555 aaKnown RBP17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 PARVGQ9HBI0 331 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 ZHX2Q9Y6X8 837 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 PTCH1Q13635 1447 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 MMP1P03956 469 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 ADCY8P40145 1251 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 TTC31Q49AM3 519 aaPredicted RBP17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 KRIT1O00522 736 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 ELF2Q15723 593 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 BBOF1Q8ND07 529 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 FAM167AQ96KS9 214 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 GPR101Q96P66 508 aaPredicted RBP17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 CDHR2Q9BYE9 1310 aa17.71■□□□□ 0.43
PCDHA3-201ENST00000522353 TCP1P17987 556 aaKnown RBP17.71■□□□□ 0.42
PCDHA3-201ENST00000522353 EEF1GP26641 437 aaKnown RBP17.71■□□□□ 0.42
PCDHA3-201ENST00000522353 PRPSAP1Q14558 356 aa17.71■□□□□ 0.42
PCDHA3-201ENST00000522353 PGBD1Q96JS3 809 aa17.71■□□□□ 0.42
PCDHA3-201ENST00000522353 SYNJ2BP-COX16A0A087WUM0 186 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 KRT10P13645 584 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 TUBGCP2Q9BSJ2 902 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 SPON1Q9HCB6 807 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 COX16Q9P0S2 106 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 PRDM15P57071 1507 aaPredicted RBP17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 A2ML1A8K2U0 1454 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 ATP11AP98196 1134 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 TCP11Q8WWU5 503 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 ZBTB9Q96C00 473 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 LRRC4Q9HBW1 653 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 FANCLQ9NW38 375 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 ARMCX2Q7L311 632 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 ARHGAP24Q8N264 748 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 MYRIPQ8NFW9 859 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 TDRD3Q9H7E2 651 aaKnown RBP17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 TYW1Q9NV66 732 aaKnown RBP17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 SEPT10Q9P0V9 454 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 PCDHA5Q9Y5H7 936 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 MED7O43513 233 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 AFPP02771 609 aaKnown RBP17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 STXBP2Q15833 593 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 CCDC62Q6P9F0 684 aa17.7■□□□□ 0.42
PCDHA3-201ENST00000522353 DDX41Q9UJV9 622 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms