RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 DDX12PQ92771 950 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 PLCD4Q9BRC7 762 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 PLVAPQ9BX97 442 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 IRX2Q9BZI1 471 aaPredicted RBP12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 DDX41Q9UJV9 622 aaKnown RBP12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 RIC1Q4ADV7 1423 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 CLRN2A0PK11 232 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 GCOM1H8Y6P7 765 aaPredicted RBP12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 POLR2MP0CAP2 368 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 TCP1P17987 556 aaKnown RBP12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 CYP2J2P51589 502 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 NCAPHQ15003 741 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 CDC37Q16543 378 aaPredicted RBP12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 RNF187Q5TA31 235 aaPredicted RBP12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 FMNL3Q8IVF7 1028 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 IFT20Q8IY31 132 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 TC2NQ8N9U0 490 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 AFAP1L1Q8TED9 768 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 TTC26A0AVF1 554 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 CCDC151A5D8V7 595 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 BACH1O14867 736 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 NR1I3Q14994 352 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 NSMFQ6X4W1 530 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 ADD3Q9UEY8 706 aaKnown RBP12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 ZEB2O60315 1214 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 PNMA6AP0CW24 399 aaPredicted RBP12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 GYS1P13807 737 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 AKR1B1P15121 316 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 RASA1P20936 1047 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 UNC13DQ70J99 1090 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 CCDC170Q8IYT3 715 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 SPZ1Q9BXG8 430 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 RABGAP1Q9Y3P9 1069 aa12.41□□□□□ -0.42
PCDHGB4-201ENST00000519479 WTIPA6NIX2 430 aaPredicted RBP12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 USP17L15C9J2P7 530 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 USP17L10C9JJH3 530 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 USP17L13C9JLJ4 530 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 USP17L11C9JVI0 530 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 USP17L18D6R9N7 530 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 USP17L22D6RA61 530 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 USP17L17D6RBQ6 530 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 USP17L19D6RCP7 530 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 USP17L20D6RJB6 530 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 ZBTB5O15062 677 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 TDP2O95551 362 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 PLA2G4BP0C869 781 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 NEFHP12036 1026 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 SNAP25P60880 206 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 USP17L24Q0WX57 530 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 USP17L6PQ6QN14 398 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 EPC1Q9H2F5 836 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 PDE11AQ9HCR9 933 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 BMP3P12645 472 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 EIF4A3P38919 411 aaKnown RBP12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 UBXN2AP68543 259 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 PTPROQ16827 1216 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 ELOA2Q8IYF1 753 aaPredicted RBP12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 ANO3Q9BYT9 981 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 FLT1P17948 1338 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 CTIFO43310 598 aaKnown RBP12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 LRRC63Q05C16 580 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 ARHGAP44Q17R89 818 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 PEX26Q7Z412 305 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 FAM178BQ8IXR5 827 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 DHX37Q8IY37 1157 aaKnown RBP12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 TBC1D16Q8TBP0 767 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 TCHPQ9BT92 498 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 CCSER1Q9C0I3 900 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 TMEM60Q9H2L4 133 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 EMILIN3Q9NT22 766 aa12.4□□□□□ -0.42
PCDHGB4-201ENST00000519479 GOLGA6CA6NDK9 693 aa12.4□□□□□ -0.43
PCDHGB4-201ENST00000519479 GOLGA6DP0CG33 693 aa12.4□□□□□ -0.43
PCDHGB4-201ENST00000519479 PSMD2Q13200 908 aa12.4□□□□□ -0.43
PCDHGB4-201ENST00000519479 R3HDM1Q15032 1099 aaKnown RBP12.4□□□□□ -0.43
PCDHGB4-201ENST00000519479 SEPT7Q16181 437 aaKnown RBP12.4□□□□□ -0.43
PCDHGB4-201ENST00000519479 GBP6Q6ZN66 633 aa12.4□□□□□ -0.43
PCDHGB4-201ENST00000519479 GOLGA6AQ9NYA3 693 aa12.4□□□□□ -0.43
PCDHGB4-201ENST00000519479 RASAL2Q9UJF2 1139 aa12.4□□□□□ -0.43
PCDHGB4-201ENST00000519479 MRPL11Q9Y3B7 192 aaKnown RBP12.4□□□□□ -0.43
PCDHGB4-201ENST00000519479 ATP8B1O43520 1251 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 ZMYND10O75800 440 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 FCER1AP12319 257 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 STAT1P42224 750 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 CRKP46108 304 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 SMTNP53814 917 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 EXOC3L4Q17RC7 722 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 CLEC10AQ8IUN9 316 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 FOXP4Q8IVH2 680 aaPredicted RBP12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 ATRIPQ8WXE1 791 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 SCLT1Q96NL6 688 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 MTFR1LQ9H019 292 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 MYZAPP0CAP1 466 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 FXR1P51114 621 aaKnown RBP eCLIP12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 PKN1Q16512 942 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 DEFB132Q7Z7B7 95 aa12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 COL23A1Q86Y22 540 aaPredicted RBP12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 U2AF1L4Q8WU68 220 aaKnown RBP12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 METTL14Q9HCE5 456 aaKnown RBP12.39□□□□□ -0.43
PCDHGB4-201ENST00000519479 LIMA1Q9UHB6 759 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms