RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 PIK3AP1Q6ZUJ8 805 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 FERMT3Q86UX7 667 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 MSL3Q8N5Y2 521 aaKnown RBP13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 TBCKQ8TEA7 893 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 SOCS4Q8WXH5 440 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 MBOAT7Q96N66 472 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 TAAR1Q96RJ0 339 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 RMDN3Q96TC7 470 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 NAP1L4Q99733 375 aaKnown RBP13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 BEGAINQ9BUH8 593 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 PXMP2Q9NR77 195 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 SLC5A4Q9NY91 659 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 B4DLN1 442 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 IGHA2P01877 340 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 GCFC2P16383 781 aaKnown RBP13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 ADORA2AP29274 412 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 CTGFP29279 349 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 TOB1P50616 345 aaPredicted RBP13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 ARHGAP4P98171 946 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 IRF5Q13568 498 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 KIF22Q14807 665 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 PCNX4Q63HM2 1172 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 MAMDC4Q6UXC1 1216 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 NEK8Q86SG6 692 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 VSIG10LQ86VR7 867 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 FCHSD1Q86WN1 690 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 FGD4Q96M96 766 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 PDCD2LQ9BRP1 358 aa13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 NOL7Q9UMY1 257 aaKnown RBP13.03□□□□□ -0.32
ARFGEF1-202ENST00000517955 MYH15Q9Y2K3 1946 aa13.02□□□□□ -0.32
ARFGEF1-202ENST00000517955 SOWAHBA6NEL2 793 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 FKTNO75072 461 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 COBLO75128 1261 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 XRCC5P13010 732 aaKnown RBP13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 PSMC4P43686 418 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 ALDH5A1P51649 535 aaPredicted RBP13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 CNTN2Q02246 1040 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 MAP2K5Q13163 448 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 ARHGEF6Q15052 776 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 PGM5Q15124 567 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 INF2Q27J81 1249 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 WDR78Q5VTH9 848 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 ARHGEF16Q5VV41 709 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 NIPA1Q7RTP0 329 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 ERO1AQ96HE7 468 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 TRIM47Q96LD4 638 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 ZNF396Q96N95 335 aaPredicted RBP13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 MPHOSPH6Q99547 160 aaKnown RBP13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 NUDT12Q9BQG2 462 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 POLR3EQ9NVU0 708 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 ASTN1O14525 1302 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 PLXNA1Q9UIW2 1896 aa13.02□□□□□ -0.33
ARFGEF1-202ENST00000517955 FAM205CA6NFA0 338 aa13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 ASB14A6NK59 587 aa13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 TNPO2O14787 897 aaKnown RBP13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 MAFGO15525 162 aa13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 BMP15O95972 392 aa13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 NR3C2P08235 984 aa13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 HOXD10P28358 340 aa13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 RGS2P41220 211 aa13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 NASPP49321 788 aaPredicted RBP13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 Q4G0T1 1027 aa13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 TNPO1Q92973 898 aaKnown RBP13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 RTEL1Q9NZ71 1219 aa13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 CFAP45Q9UL16 551 aa13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 BOLA1Q9Y3E2 137 aa13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 CASP8AP2Q9UKL3 1982 aa13.01□□□□□ -0.33
ARFGEF1-202ENST00000517955 SYNGAP1Q96PV0 1343 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 MEIS1O00470 390 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 EIF3JO75822 258 aaKnown RBP13□□□□□ -0.33
ARFGEF1-202ENST00000517955 PGK2P07205 417 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 CCND2P30279 289 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 PRMT2P55345 433 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 MRPS9P82933 396 aaKnown RBP13□□□□□ -0.33
ARFGEF1-202ENST00000517955 CEP55Q53EZ4 464 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 TTC38Q5R3I4 469 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 OLFML2BQ68BL8 750 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 DPP9Q86TI2 863 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 TRMT44Q8IYL2 757 aaKnown RBP13□□□□□ -0.33
ARFGEF1-202ENST00000517955 ZNF296Q8WUU4 475 aaPredicted RBP13□□□□□ -0.33
ARFGEF1-202ENST00000517955 MAML3Q96JK9 1138 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 PGBD1Q96JS3 809 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 PURBQ96QR8 312 aaKnown RBP13□□□□□ -0.33
ARFGEF1-202ENST00000517955 UBIAD1Q9Y5Z9 338 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 TCHHQ07283 1943 aa13□□□□□ -0.33
ARFGEF1-202ENST00000517955 IGLV3-22A0A075B6J6 115 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 LAD1O00515 517 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 TBX3O15119 743 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 YEATS4O95619 227 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 EIF2AK2P19525 551 aaKnown RBP12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 KRT85P78386 507 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 DNM1Q05193 864 aaKnown RBP12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 STXBP2Q15833 593 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 LETM2Q2VYF4 491 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 FOXD4L5Q5VV16 416 aaPredicted RBP12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 ANO1Q5XXA6 986 aa12.99□□□□□ -0.33
ARFGEF1-202ENST00000517955 FAM173BQ6P4H8 233 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 1863.6 ms