RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 MYOCOSA0A1B0GUC4 107 aa6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 MAFKO60675 156 aa6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 YBX1P67809 324 aaKnown RBP6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 SRSF3P84103 164 aaKnown RBP6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 TARBP2Q15633 366 aaKnown RBP6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 FRS2Q8WU20 508 aa6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 DCAF4Q8WV16 495 aa6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 CHAMP1Q96JM3 812 aa6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 DNAJC2Q99543 621 aaKnown RBP6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 NUB1Q9Y5A7 615 aa6.14□□□□□ -1.43
HMGB3P13-201ENST00000511263 A0A0U1RQG5 324 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 NUDT19A8MXV4 375 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 RFXAPO00287 272 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 PRODHO43272 600 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 PABPC1P11940 636 aaKnown RBP6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 PFKLP17858 780 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 SUMO1P63165 101 aaKnown RBP6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 LSAMPQ13449 338 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 ZBTB38Q8NAP3 1195 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 TMEM145Q8NBT3 493 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 TRMT2BQ96GJ1 504 aaKnown RBP6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 TMEM169Q96HH4 297 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 PARD6AQ9NPB6 346 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 GPR27Q9NS67 375 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 SNTG2Q9NY99 539 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 RWDD3Q9Y3V2 267 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 ABCC8Q09428 1581 aa6.13□□□□□ -1.43
HMGB3P13-201ENST00000511263 A0A0G2JLL6 359 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 H7BY64 318 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 AQP7O14520 342 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 FUCA1P04066 466 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 DBHP09172 617 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 BMP7P18075 431 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 TACR1P25103 407 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 DLG4P78352 724 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 RASA3Q14644 834 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 SLC35F1Q5T1Q4 408 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 WWC2Q6AWC2 1192 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 USP53Q70EK8 1073 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 RIOX2Q8IUF8 465 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 NLGN1Q8N2Q7 840 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 ZSWIM2Q8NEG5 633 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 KDM2BQ8NHM5 1336 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 MARCH2Q9P0N8 246 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 GULP1Q9UBP9 304 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 PFDN2Q9UHV9 154 aa6.12□□□□□ -1.43
HMGB3P13-201ENST00000511263 F8W031 263 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 TBX1O43435 398 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 GALK1P51570 392 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 RPTNQ6XPR3 784 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 CEP68Q76N32 757 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 MAMDC2Q7Z304 686 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 TMC6Q7Z403 805 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 KREMEN2Q8NCW0 462 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 PANK1Q8TE04 598 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 THAP3Q8WTV1 239 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 SEC14L1Q92503 715 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 RELTQ969Z4 430 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 ALG1Q9BT22 464 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 SGPP1Q9BX95 441 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 PCDH18Q9HCL0 1135 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 ARHGEF4Q9NR80 690 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 BTG4Q9NY30 223 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 KLHL14Q9P2G3 628 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 JAG2Q9Y219 1238 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 PCDHA2Q9Y5H9 948 aa6.11□□□□□ -1.43
HMGB3P13-201ENST00000511263 TRBV23-1A0A0A0MS06 115 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 C22orf46C9J442 243 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 KRIT1O00522 736 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 DLX3O60479 287 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 DGKIO75912 1065 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 MSL3P1P0C860 447 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 GLI4P10075 376 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 VIPR1P32241 457 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 SLC6A11P48066 632 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 CEBPAP49715 358 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 KIZQ2M2Z5 673 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 SPATC1Q76KD6 591 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 IFNL3Q8IZI9 196 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 TSPAN17Q96FV3 270 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 MTA3Q9BTC8 594 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 LGR4Q9BXB1 951 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 KRTAP17-1Q9BYP8 105 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 RNF38Q9H0F5 515 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 ZCCHC4Q9H5U6 513 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 ZSWIM4Q9H7M6 989 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 GCM1Q9NP62 436 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 NGRNQ9NPE2 291 aaKnown RBP6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 FAN1Q9Y2M0 1017 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 NPFFR2Q9Y5X5 522 aa6.1□□□□□ -1.43
HMGB3P13-201ENST00000511263 N4BP3O15049 544 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 GSTA4O15217 222 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 EFCAB14O75071 495 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 CAPNS1P04632 268 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 NCAM1P13591 858 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 NCLP19338 710 aaKnown RBP6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 GABREP78334 506 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 PRSS53Q2L4Q9 553 aa6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 PLEKHN1Q494U1 663 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P13-201ENST00000511263 ZNF385BQ569K4 471 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms