RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 OSBP2Q969R2 916 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 TRMT2BQ96GJ1 504 aaKnown RBP5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 CHAMP1Q96JM3 812 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 NOX5Q96PH1 765 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 RNF38Q9H0F5 515 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 FAN1Q9Y2M0 1017 aa5.41□□□□□ -1.54
HMGB1P29-201ENST00000505659 FFAR3O14843 346 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 MYO1BO43795 1136 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 DIAPH1O60610 1272 aaKnown RBP5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 C8BP07358 591 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 HSP90AA2PQ14568 343 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 VWA3BQ502W6 1294 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 KCNT2Q6UVM3 1135 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 TMEM151BQ8IW70 566 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 FAM26EQ8N5C1 309 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 SYT8Q8NBV8 401 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 ST13P5Q8NFI4 369 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 FNIP1Q8TF40 1166 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 TMEM169Q96HH4 297 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 SGSM3Q96HU1 749 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 KCNC2Q96PR1 638 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 PHF20Q9BVI0 1012 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 CLDND1Q9NY35 253 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 PALD1Q9ULE6 856 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 NPFFR2Q9Y5X5 522 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 X6R8D5 127 aa5.4□□□□□ -1.54
HMGB1P29-201ENST00000505659 U2SURPO15042 1029 aaKnown RBP5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 PDPK1O15530 556 aa5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 PABPC1P11940 636 aaKnown RBP5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 HTRA3P83110 453 aa5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 LSAMPQ13449 338 aa5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 SLC9A5Q14940 896 aa5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 TTLL10Q6ZVT0 673 aa5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 B3GNT8Q7Z7M8 397 aa5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 RIOX2Q8IUF8 465 aa5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 MARCH10Q8NA82 808 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 DDX11Q96FC9 970 aa5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 AP5M1Q9H0R1 490 aa5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 CDIP1Q9H305 208 aa5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 PMF1-BGLAPU3KQ54 211 aa5.39□□□□□ -1.55
HMGB1P29-201ENST00000505659 FAM221BA6H8Z2 402 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 ADCY3O60266 1144 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 ZBTB7AO95365 584 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 FGFR1P11362 822 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 HOXA5P20719 270 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 STAT5AP42229 794 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 SLC6A11P48066 632 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 DLX2Q07687 328 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 CACNB2Q08289 660 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 SERINC3Q13530 473 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 MROH9Q5TGP6 573 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 FOXB2Q5VYV0 432 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 NSMFQ6X4W1 530 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 MILR1Q7Z6M3 343 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 FEZF2Q8TBJ5 459 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 ZNF526Q8TF50 670 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 SEC14L1Q92503 715 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 SPATA9Q9BWV2 254 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 JAM3Q9BX67 310 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 ZCCHC4Q9H5U6 513 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 PARD6AQ9NPB6 346 aa5.38□□□□□ -1.55
HMGB1P29-201ENST00000505659 TRAV20A0A0B4J274 112 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 A0A0G2JLL6 359 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 IQCA1LA6NCM1 817 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 GTF2A2P52657 109 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 SMAD4Q13485 552 aaKnown RBP5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 RASGRF1Q13972 1273 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 MTERF2Q49AM1 385 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 STK32CQ86UX6 486 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 LRRC47Q8N1G4 583 aaKnown RBP5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 LINC01356Q8N9X3 169 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 CPA5Q8WXQ8 436 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 C20orf173Q96LM9 149 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 GORASP1Q9BQQ3 440 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 GPR27Q9NS67 375 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 COA3Q9Y2R0 106 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 ASXL2Q76L83 1435 aa5.37□□□□□ -1.55
HMGB1P29-201ENST00000505659 OTOL1A6NHN0 477 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 H7BY64 318 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 SSRP1Q08945 709 aaKnown RBP5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 IFRD2Q12894 506 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 RASA3Q14644 834 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 NBPF6Q5VWK0 638 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 STEAP3Q658P3 488 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 CD300LDQ6UXZ3 194 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 ETV3LQ6ZN32 361 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 SAPCD2Q86UD0 394 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 MIB1Q86YT6 1006 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 ZDHHC14Q8IZN3 488 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 ARRDC4Q8NCT1 418 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 NBPF4Q96M43 638 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 CCDC113Q9H0I3 377 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 XYLT2Q9H1B5 865 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 TRAF6Q9Y4K3 522 aa5.36□□□□□ -1.55
HMGB1P29-201ENST00000505659 FAM153BP0C7A2 387 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 CYP2C8P10632 490 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 SLURP1P55000 103 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms