RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 TMEM169Q96HH4 297 aa4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 RIPOR3Q96MK2 946 aa4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 NKX2-4Q9H2Z4 354 aa4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 CERS4Q9HA82 394 aa4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 TOPORSQ9NS56 1045 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 TOMM22Q9NS69 142 aa4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 OXSMQ9NWU1 459 aa4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 DNAJC28Q9NX36 388 aa4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 CLIC5Q9NZA1 410 aa4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 TPCN1Q9ULQ1 816 aa4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 MAGED2Q9UNF1 606 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 CTDP1Q9Y5B0 961 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 PCDHB12Q9Y5F1 795 aa4.35□□□□□ -1.71
HMGB1P22-201ENST00000505315 H7C1D1 291 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 LINC01387J3KSC0 135 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 MEIS1O00470 390 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 DDX3YO15523 660 aaKnown RBP4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 MGEA5O60502 916 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 TLR5O60602 858 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 MBD4O95243 580 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 IFIT1P09914 478 aaKnown RBP4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 HSD3B1P14060 373 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 SMPD1P17405 629 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 KCNA6P17658 529 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 ABCB4P21439 1286 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 ITGA6P23229 1130 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 CALRP27797 417 aaKnown RBP4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 GRK6P43250 576 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 MAPK10P53779 464 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 KIF23Q02241 960 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 TNFAIP2Q03169 654 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 SCRN1Q12765 414 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 PAK1Q13153 545 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 ZNF174Q15697 407 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 TAF12Q16514 161 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 TUBB8Q3ZCM7 444 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 ANKRD39Q53RE8 183 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 HP1BP3Q5SSJ5 553 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 ZBTB37Q5TC79 503 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 TTLL5Q6EMB2 1281 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 FAM180BQ6P0A1 224 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 B3GNT9Q6UX72 402 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 SYT9Q86SS6 491 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 ANKRD18AQ8IVF6 992 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 FIBCD1Q8N539 461 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 PPM1NQ8N819 430 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 NAXEQ8NCW5 288 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 DEPTORQ8TB45 409 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 NSUN6Q8TEA1 469 aaKnown RBP4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 GCC1Q96CN9 775 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 ORAI3Q9BRQ5 295 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 CARD10Q9BWT7 1032 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 WDR12Q9GZL7 423 aaKnown RBP4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 CATSPERZQ9NTU4 200 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 CACNA2D2Q9NY47 1150 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 PKD2L1Q9P0L9 805 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 SLC6A14Q9UN76 642 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 POLHQ9Y253 713 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 DIS3Q9Y2L1 958 aaKnown RBP4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 PTPN22Q9Y2R2 807 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 SF3B6Q9Y3B4 125 aaKnown RBP4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 PCDHA11Q9Y5I1 949 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 SNX13Q9Y5W8 968 aa4.34□□□□□ -1.71
HMGB1P22-201ENST00000505315 CCDC66A2RUB6 948 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 RASA4BC9J798 803 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 GSTA4O15217 222 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 FANCGO15287 622 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 MEFVO15553 781 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 RASA4O43374 803 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 RNGTTO60942 597 aaKnown RBP4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 ITGBL1O95965 494 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 ITIH2P19823 946 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 FGFR3P22607 806 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 SMARCA1P28370 1054 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 LSP1P33241 339 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 NLRP12P59046 1061 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 ZNF445P59923 1031 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 GPR85P60893 370 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 PIP4K2BP78356 416 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 GRM1Q13255 1194 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 KIF4BQ2VIQ3 1234 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 CCDC184Q52MB2 194 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 CCDC157Q569K6 752 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 ZC3H12AQ5D1E8 599 aaKnown RBP4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 SLC35F1Q5T1Q4 408 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 RNF220Q5VTB9 566 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 PRAMEF13Q5VWM6 474 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 LILRA6Q6PI73 481 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 RINLQ6ZS11 566 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 OTOP3Q7RTS5 596 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 RASSF3Q86WH2 238 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 DENND1CQ8IV53 801 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 MRPL41Q8IXM3 137 aaKnown RBP4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 FAM43AQ8N2R8 423 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 DIS3LQ8TF46 1054 aaKnown RBP4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 CYB5D2Q8WUJ1 264 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 JADE3Q92613 823 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 SLC26A6Q9BXS9 759 aa4.33□□□□□ -1.72
HMGB1P22-201ENST00000505315 GTPBP4Q9BZE4 634 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms