RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 SCLYQ96I15 445 aa23.17■■□□□ 1.3
UBE2D3-220ENST00000505307 NOD1Q9Y239 953 aa23.17■■□□□ 1.3
UBE2D3-220ENST00000505307 MRVI1Q9Y6F6 885 aa23.17■■□□□ 1.3
UBE2D3-220ENST00000505307 PPP1R11O60927 126 aaPredicted RBP23.16■■□□□ 1.3
UBE2D3-220ENST00000505307 ACTN1P12814 892 aa23.16■■□□□ 1.3
UBE2D3-220ENST00000505307 TROAPQ12815 778 aa23.16■■□□□ 1.3
UBE2D3-220ENST00000505307 CATIPQ7Z7H3 387 aa23.16■■□□□ 1.3
UBE2D3-220ENST00000505307 CCDC155Q8N6L0 562 aa23.16■■□□□ 1.3
UBE2D3-220ENST00000505307 GAS2L1Q99501 681 aaPredicted RBP23.16■■□□□ 1.3
UBE2D3-220ENST00000505307 PDCD2LQ9BRP1 358 aa23.16■■□□□ 1.3
UBE2D3-220ENST00000505307 MTA3Q9BTC8 594 aa23.16■■□□□ 1.3
UBE2D3-220ENST00000505307 EYSQ5T1H1 3165 aa23.15■■□□□ 1.3
UBE2D3-220ENST00000505307 PNMA6FA0A0J9YX94 578 aa23.15■■□□□ 1.3
UBE2D3-220ENST00000505307 GCOM1H8Y6P7 765 aaPredicted RBP23.15■■□□□ 1.3
UBE2D3-220ENST00000505307 POLR2MP0CAP2 368 aa23.15■■□□□ 1.3
UBE2D3-220ENST00000505307 IRX6P78412 446 aaPredicted RBP23.15■■□□□ 1.3
UBE2D3-220ENST00000505307 TMEM67Q5HYA8 995 aa23.15■■□□□ 1.3
UBE2D3-220ENST00000505307 HOMER1Q86YM7 354 aa23.15■■□□□ 1.3
UBE2D3-220ENST00000505307 MAP3K14Q99558 947 aa23.15■■□□□ 1.3
UBE2D3-220ENST00000505307 KATNAL1Q9BW62 490 aa23.15■■□□□ 1.3
UBE2D3-220ENST00000505307 SLC28A3Q9HAS3 691 aa23.15■■□□□ 1.3
UBE2D3-220ENST00000505307 TGFB3P10600 412 aa23.14■■□□□ 1.29
UBE2D3-220ENST00000505307 PTGISQ16647 500 aa23.14■■□□□ 1.29
UBE2D3-220ENST00000505307 CHST3Q7LGC8 479 aa23.14■■□□□ 1.29
UBE2D3-220ENST00000505307 VSIG10LQ86VR7 867 aa23.14■■□□□ 1.29
UBE2D3-220ENST00000505307 DHX37Q8IY37 1157 aaKnown RBP23.14■■□□□ 1.29
UBE2D3-220ENST00000505307 PPTC7Q8NI37 304 aa23.14■■□□□ 1.29
UBE2D3-220ENST00000505307 CAGE1Q8TC20 777 aa23.14■■□□□ 1.29
UBE2D3-220ENST00000505307 VWCEQ96DN2 955 aa23.14■■□□□ 1.29
UBE2D3-220ENST00000505307 PIGSQ96S52 555 aa23.14■■□□□ 1.29
UBE2D3-220ENST00000505307 KIAA1217Q5T5P2 1943 aa23.14■■□□□ 1.29
UBE2D3-220ENST00000505307 ZBBXA8MT70 800 aa23.13■■□□□ 1.29
UBE2D3-220ENST00000505307 IQCF3P0C7M6 154 aa23.13■■□□□ 1.29
UBE2D3-220ENST00000505307 MB21D2Q8IYB1 491 aaPredicted RBP23.13■■□□□ 1.29
UBE2D3-220ENST00000505307 IGDCC4Q8TDY8 1250 aa23.13■■□□□ 1.29
UBE2D3-220ENST00000505307 KAT2BQ92831 832 aa23.13■■□□□ 1.29
UBE2D3-220ENST00000505307 COL25A1Q9BXS0 654 aaPredicted RBP23.13■■□□□ 1.29
UBE2D3-220ENST00000505307 PCDHA11Q9Y5I1 949 aa23.13■■□□□ 1.29
UBE2D3-220ENST00000505307 RBM8AQ9Y5S9 174 aaKnown RBP23.13■■□□□ 1.29
UBE2D3-220ENST00000505307 PARNO95453 639 aaKnown RBP23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 MYCLP12524 364 aaPredicted RBP23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 ATP2A2P16615 1042 aaKnown RBP23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 CCND2P30279 289 aa23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 HOXA13P31271 388 aaPredicted RBP23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 CHMP4BP1P59074 171 aa23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 PGM5Q15124 567 aa23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 SLC35G1Q2M3R5 365 aa23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 DEFB128Q7Z7B8 93 aa23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 TMTC2Q8N394 836 aa23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 AFAP1L1Q8TED9 768 aa23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 SENP2Q9HC62 589 aa23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 TAF6LQ9Y6J9 622 aa23.12■■□□□ 1.29
UBE2D3-220ENST00000505307 CYTH3O43739 400 aa23.11■■□□□ 1.29
UBE2D3-220ENST00000505307 PPFIA4O75335 1185 aa23.11■■□□□ 1.29
UBE2D3-220ENST00000505307 HOXD8P13378 290 aaPredicted RBP23.11■■□□□ 1.29
UBE2D3-220ENST00000505307 SMARCA1P28370 1054 aa23.11■■□□□ 1.29
UBE2D3-220ENST00000505307 KIF5BP33176 963 aa23.11■■□□□ 1.29
UBE2D3-220ENST00000505307 CASC1Q6TDU7 716 aa23.11■■□□□ 1.29
UBE2D3-220ENST00000505307 C7orf31Q8N865 590 aa23.11■■□□□ 1.29
UBE2D3-220ENST00000505307 PHOSPHO2Q8TCD6 241 aa23.11■■□□□ 1.29
UBE2D3-220ENST00000505307 LZTS2Q9BRK4 669 aa23.11■■□□□ 1.29
UBE2D3-220ENST00000505307 NKX2-4Q9H2Z4 354 aa23.11■■□□□ 1.29
UBE2D3-220ENST00000505307 STAM2O75886 525 aa23.1■■□□□ 1.29
UBE2D3-220ENST00000505307 RGS20O76081 388 aa23.1■■□□□ 1.29
UBE2D3-220ENST00000505307 DDAH1O94760 285 aa23.1■■□□□ 1.29
UBE2D3-220ENST00000505307 F2P00734 622 aa23.1■■□□□ 1.29
UBE2D3-220ENST00000505307 PSEN2P49810 448 aa23.1■■□□□ 1.29
UBE2D3-220ENST00000505307 ANTXR2P58335 489 aa23.1■■□□□ 1.29
UBE2D3-220ENST00000505307 CELF3Q5SZQ8 465 aaKnown RBP23.1■■□□□ 1.29
UBE2D3-220ENST00000505307 CTCFLQ8NI51 663 aaPredicted RBP23.1■■□□□ 1.29
UBE2D3-220ENST00000505307 SLC9A7Q96T83 725 aa23.1■■□□□ 1.29
UBE2D3-220ENST00000505307 PRDM12Q9H4Q4 367 aa23.1■■□□□ 1.29
UBE2D3-220ENST00000505307 GTF2IRD1Q9UHL9 959 aa23.1■■□□□ 1.29
UBE2D3-220ENST00000505307 YBX2Q9Y2T7 364 aaKnown RBP23.1■■□□□ 1.29
UBE2D3-220ENST00000505307 GNAQP50148 359 aa23.09■■□□□ 1.29
UBE2D3-220ENST00000505307 RBL2Q08999 1139 aa23.09■■□□□ 1.29
UBE2D3-220ENST00000505307 MYSM1Q5VVJ2 828 aa23.09■■□□□ 1.29
UBE2D3-220ENST00000505307 GDF6Q6KF10 455 aaPredicted RBP23.09■■□□□ 1.29
UBE2D3-220ENST00000505307 PPP1R13LQ8WUF5 828 aa23.09■■□□□ 1.29
UBE2D3-220ENST00000505307 SPZ1Q9BXG8 430 aa23.09■■□□□ 1.29
UBE2D3-220ENST00000505307 FTOQ9C0B1 505 aaKnown RBP eCLIP23.09■■□□□ 1.298e-9■□□□□ 8.1
UBE2D3-220ENST00000505307 HAS3O00219 553 aa23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 BAIAP3O94812 1187 aa23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 MCM5P33992 734 aa23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 MFSD10Q14728 455 aa23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 GNPTABQ3T906 1256 aa23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 FCHSD1Q86WN1 690 aa23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 ZNF654Q8IZM8 581 aa23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 SYMPKQ92797 1274 aaKnown RBP23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 RRP36Q96EU6 259 aaKnown RBP23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 TMEM87BQ96K49 555 aa23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 SPATA33Q96N06 139 aa23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 LY9Q9HBG7 655 aa23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 MYO9BQ13459 2157 aa23.08■■□□□ 1.29
UBE2D3-220ENST00000505307 GGPS1O95749 300 aa23.07■■□□□ 1.28
UBE2D3-220ENST00000505307 SELPP16109 830 aa23.07■■□□□ 1.28
UBE2D3-220ENST00000505307 RABGGTBP53611 331 aa23.07■■□□□ 1.28
UBE2D3-220ENST00000505307 KIAA0753Q2KHM9 967 aa23.07■■□□□ 1.28
UBE2D3-220ENST00000505307 PPP2R2DQ66LE6 453 aa23.07■■□□□ 1.28
UBE2D3-220ENST00000505307 IL31RAQ8NI17 732 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms