RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 IQCKQ8N0W5 287 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 NSMCE1Q8WV22 266 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 CNNM2Q9H8M5 875 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 RMND1Q9NWS8 449 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 AMACRQ9UHK6 382 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 ATP8A1Q9Y2Q0 1164 aa8.4□□□□□ -1.06
NEDD9-208ENST00000504387 MST1RQ04912 1400 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 LTN1O94822 1766 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 MAGEB6P1A0A0J9YX57 407 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 CCDC189A1A4V9 331 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 FOXO6A8MYZ6 492 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 SEMA3EO15041 775 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 DAPK3O43293 454 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 FAM107AO95990 144 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 UQCRFS1P1P0C7P4 283 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 TCP1P17987 556 aaKnown RBP8.4□□□□□ -1.07
NEDD9-208ENST00000504387 HSD17B3P37058 310 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 SMTNP53814 917 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 ATP2C1P98194 919 aaPredicted RBP8.4□□□□□ -1.07
NEDD9-208ENST00000504387 UBE3CQ15386 1083 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 NAALADL2Q58DX5 795 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 GIGYF2Q6Y7W6 1299 aaKnown RBP8.4□□□□□ -1.07
NEDD9-208ENST00000504387 RAPGEF5Q92565 580 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 ESR2Q92731 530 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 NOX5Q96PH1 765 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 ELAC2Q9BQ52 826 aaKnown RBP8.4□□□□□ -1.07
NEDD9-208ENST00000504387 TRIM6Q9C030 488 aaPredicted RBP8.4□□□□□ -1.07
NEDD9-208ENST00000504387 YIPF3Q9GZM5 350 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 NEUROG2Q9H2A3 272 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 DISC1Q9NRI5 854 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 FBXL5Q9UKA1 691 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 LRRC37A3O60309 1634 aa8.4□□□□□ -1.07
NEDD9-208ENST00000504387 TSPY2A6NKD2 308 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 A8MUI8 341 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 USP17L12C9JPN9 530 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 USP17L21D6R901 530 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 PDE8AO60658 829 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 CTNND1O60716 968 aaKnown RBP8.39□□□□□ -1.07
NEDD9-208ENST00000504387 ITGA4P13612 1032 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 LRRC14Q15048 493 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 PREPLQ4J6C6 727 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-208ENST00000504387 TTI2Q6NXR4 508 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 STAG2Q8N3U4 1231 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 ZBTB10Q96DT7 871 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 ISCA1Q9BUE6 129 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 PNMA2Q9UL42 364 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 STX8Q9UNK0 236 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 TCRBV5S4A2TA0A5A2 114 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 ERVV-2B6SEH9 535 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 RASSF9O75901 435 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 FECHP22830 423 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 TXKP42681 527 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 ERVK-9P63128 1117 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 SKOR1P84550 965 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 ITGB3BPQ13352 177 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-208ENST00000504387 SUSD4Q5VX71 490 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 KDM7AQ6ZMT4 941 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 FNBP4Q8N3X1 1017 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-208ENST00000504387 FAM133AQ8N9E0 248 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 P2RX5Q93086 422 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 ZSCAN10Q96SZ4 725 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-208ENST00000504387 MTFR1LQ9H019 292 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 ZCWPW1Q9H0M4 648 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.39□□□□□ -1.073e-15■■□□□ 11.6
NEDD9-208ENST00000504387 MAP3K15Q6ZN16 1313 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 NWD2Q9ULI1 1742 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 ANO9A1A5B4 782 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 GCFC2P16383 781 aaKnown RBP8.39□□□□□ -1.07
NEDD9-208ENST00000504387 TXNRD1Q16881 649 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 SPTY2D1Q68D10 685 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-208ENST00000504387 OTUD6AQ7L8S5 288 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 TAF4BQ92750 862 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 FAXDC2Q96IV6 333 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 RNF26Q9BY78 433 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-208ENST00000504387 NDST4Q9H3R1 872 aa8.39□□□□□ -1.07
NEDD9-208ENST00000504387 PDS5AQ29RF7 1337 aaKnown RBP8.38□□□□□ -1.07
NEDD9-208ENST00000504387 STK36Q9NRP7 1315 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 SNX1Q13596 522 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 NPY5RQ15761 445 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 ANKRD20A8PQ5CZ79 823 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 MIIPQ5JXC2 388 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 SGSM3Q96HU1 749 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 TRIM51Q9BSJ1 452 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.38□□□□□ -1.07
NEDD9-208ENST00000504387 A0A1B0GUA9 196 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 MARCH6O60337 910 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 CCNT1O60563 726 aaKnown RBP8.38□□□□□ -1.07
NEDD9-208ENST00000504387 DIAPH2O60879 1101 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 EEF1GP26641 437 aaKnown RBP8.38□□□□□ -1.07
NEDD9-208ENST00000504387 MEA1Q16626 185 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 CCDC170Q8IYT3 715 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 SPICE1Q8N0Z3 855 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 SLC17A8Q8NDX2 589 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 SPIRE2Q8WWL2 714 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 SEMA6BQ9H3T3 888 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 NOD2Q9HC29 1040 aa8.38□□□□□ -1.07
NEDD9-208ENST00000504387 ACTN1P12814 892 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 SCG2P13521 617 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 KCNB1Q14721 858 aa8.37□□□□□ -1.07
NEDD9-208ENST00000504387 ZKSCAN8Q15776 578 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms