RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 MMP1P03956 469 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 CNGA1P29973 690 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 GJA8P48165 433 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 JAKMIP3Q5VZ66 844 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 KRT40Q6A162 431 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 FAM184AQ8NB25 1140 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 RASGRP4Q8TDF6 673 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 U2AF1L4Q8WU68 220 aaKnown RBP16.21■□□□□ 0.19
RNF4-202ENST00000502316 SCFD2Q8WU76 684 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 INTS4Q96HW7 963 aaKnown RBP16.21■□□□□ 0.19
RNF4-202ENST00000502316 PGBD1Q96JS3 809 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 INPP4AQ96PE3 977 aaPredicted RBP16.21■□□□□ 0.19
RNF4-202ENST00000502316 DEFB118Q96PH6 123 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 PDGFCQ9NRA1 345 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 KIF3AQ9Y496 699 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 KIAA1217Q5T5P2 1943 aa16.21■□□□□ 0.19
RNF4-202ENST00000502316 SGPL1O95470 568 aa16.2■□□□□ 0.18
RNF4-202ENST00000502316 MYCLP12524 364 aaPredicted RBP16.2■□□□□ 0.18
RNF4-202ENST00000502316 ADCYAP1R1P41586 468 aa16.2■□□□□ 0.18
RNF4-202ENST00000502316 TRIM29Q14134 588 aa16.2■□□□□ 0.18
RNF4-202ENST00000502316 IQSEC1Q6DN90 963 aa16.2■□□□□ 0.18
RNF4-202ENST00000502316 HSCBQ8IWL3 235 aa16.2■□□□□ 0.18
RNF4-202ENST00000502316 FBXO18Q8NFZ0 1043 aa16.2■□□□□ 0.18
RNF4-202ENST00000502316 C8orf76Q96K31 380 aa16.2■□□□□ 0.18
RNF4-202ENST00000502316 OGDHLQ9ULD0 1010 aa16.2■□□□□ 0.18
RNF4-202ENST00000502316 DNAH12Q6ZR08 3092 aa16.2■□□□□ 0.18
RNF4-202ENST00000502316 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.19■□□□□ 0.18
RNF4-202ENST00000502316 DUSP11O75319 330 aaKnown RBP16.19■□□□□ 0.18
RNF4-202ENST00000502316 CYP3A4P08684 503 aa16.19■□□□□ 0.18
RNF4-202ENST00000502316 RARBP10826 455 aa16.19■□□□□ 0.18
RNF4-202ENST00000502316 GJB2P29033 226 aa16.19■□□□□ 0.18
RNF4-202ENST00000502316 ARHGAP4P98171 946 aa16.19■□□□□ 0.18
RNF4-202ENST00000502316 TNFAIP2Q03169 654 aa16.19■□□□□ 0.18
RNF4-202ENST00000502316 DUSP28Q4G0W2 176 aa16.19■□□□□ 0.18
RNF4-202ENST00000502316 CCDC62Q6P9F0 684 aa16.19■□□□□ 0.18
RNF4-202ENST00000502316 OXER1Q8TDS5 423 aa16.19■□□□□ 0.18
RNF4-202ENST00000502316 TNFRSF25Q93038 417 aa16.19■□□□□ 0.18
RNF4-202ENST00000502316 WDR11Q9BZH6 1224 aa16.19■□□□□ 0.18
RNF4-202ENST00000502316 SMC3Q9UQE7 1217 aa16.19■□□□□ 0.18
RNF4-202ENST00000502316 GNEQ9Y223 722 aaKnown RBP16.19■□□□□ 0.18
RNF4-202ENST00000502316 POTEFA5A3E0 1075 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 CCDC85CA6NKD9 419 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 ARIH2O95376 493 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 TGFB3P10600 412 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 SMPD1P17405 629 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 ICAM3P32942 547 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 KRT2P35908 639 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 NKX3-2P78367 333 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 TTLL4Q14679 1199 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 GNPTABQ3T906 1256 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 KCNV1Q6PIU1 500 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 KRT25Q7Z3Z0 450 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 DIS3L2Q8IYB7 885 aaKnown RBP16.18■□□□□ 0.18
RNF4-202ENST00000502316 LENG1Q96BZ8 264 aaPredicted RBP16.18■□□□□ 0.18
RNF4-202ENST00000502316 BRMS1Q9HCU9 246 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 Q9Y3F1 56 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 UBIAD1Q9Y5Z9 338 aa16.18■□□□□ 0.18
RNF4-202ENST00000502316 MYH7BA7E2Y1 1941 aa16.17■□□□□ 0.18
RNF4-202ENST00000502316 NKRFO15226 690 aaKnown RBP eCLIP16.17■□□□□ 0.18
RNF4-202ENST00000502316 EDIL3O43854 480 aa16.17■□□□□ 0.18
RNF4-202ENST00000502316 ITGB5P18084 799 aa16.17■□□□□ 0.18
RNF4-202ENST00000502316 NR5A1Q13285 461 aa16.17■□□□□ 0.18
RNF4-202ENST00000502316 TMEM63BQ5T3F8 832 aa16.17■□□□□ 0.18
RNF4-202ENST00000502316 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
RNF4-202ENST00000502316 SEPT14Q6ZU15 432 aa16.17■□□□□ 0.18
RNF4-202ENST00000502316 GPRASP2Q96D09 838 aa16.17■□□□□ 0.18
RNF4-202ENST00000502316 ZFP91Q96JP5 570 aaPredicted RBP16.17■□□□□ 0.18
RNF4-202ENST00000502316 UPF3AQ9H1J1 476 aaKnown RBP16.17■□□□□ 0.18
RNF4-202ENST00000502316 XPNPEP3Q9NQH7 507 aa16.17■□□□□ 0.18
RNF4-202ENST00000502316 DDX41Q9UJV9 622 aaKnown RBP16.17■□□□□ 0.18
RNF4-202ENST00000502316 SYNRGQ9UMZ2 1314 aa16.17■□□□□ 0.18
RNF4-202ENST00000502316 BTBD18B2RXH4 712 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 SPATA31C2B4DYI2 1134 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 MAFGO15525 162 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 FIBPO43427 364 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 ADAMTS4O75173 837 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 TXNP10599 105 aaKnown RBP16.16■□□□□ 0.18
RNF4-202ENST00000502316 CIITAP33076 1130 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 USP11P51784 963 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 FOSBP53539 338 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 GJA9P57773 515 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 GUCY1B3Q02153 619 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 SEMA3FQ13275 785 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 NONOQ15233 471 aaKnown RBP eCLIP16.16■□□□□ 0.186e-7■■■□□ 19.2
RNF4-202ENST00000502316 CEP55Q53EZ4 464 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 NIPA1Q7RTP0 329 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 ANKLE1Q8NAG6 615 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 TBCKQ8TEA7 893 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 MXRA8Q9BRK3 442 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 JADE2Q9NQC1 790 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 RTEL1Q9NZ71 1219 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 MRVI1Q9Y6F6 885 aa16.16■□□□□ 0.18
RNF4-202ENST00000502316 IGLV3-22A0A075B6J6 115 aa16.15■□□□□ 0.18
RNF4-202ENST00000502316 CCDC194A0A1B0GVG4 234 aa16.15■□□□□ 0.18
RNF4-202ENST00000502316 FAM86B1E9PN63 330 aa16.15■□□□□ 0.18
RNF4-202ENST00000502316 MEIS1O00470 390 aa16.15■□□□□ 0.18
RNF4-202ENST00000502316 FAM86B2P0C5J1 330 aa16.15■□□□□ 0.18
RNF4-202ENST00000502316 CST5P28325 142 aaPredicted RBP16.15■□□□□ 0.18
RNF4-202ENST00000502316 MNX1P50219 401 aaPredicted RBP16.15■□□□□ 0.18
RNF4-202ENST00000502316 MTMR1Q13613 665 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms