RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 GBX1Q14549 363 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 ZNF460Q14592 562 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 PUM3Q15397 648 aaKnown RBP5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 ZKSCAN2Q63HK3 967 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 HEATR6Q6AI08 1181 aaKnown RBP5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 XRRA1Q6P2D8 792 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 IGF2-ASQ6U949 168 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 LYPD4Q6UWN0 246 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 SRLQ86TD4 932 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 TTC30BQ8N4P2 665 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 CRACR2BQ8N4Y2 399 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 SLC7A14Q8TBB6 771 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 PI4K2BQ8TCG2 481 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 XAGE3Q8WTP9 111 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 CYB5D2Q8WUJ1 264 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 USP7Q93009 1102 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 TTC1Q99614 292 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 TMPRSS13Q9BYE2 586 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 CEP41Q9BYV8 373 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 RSPH9Q9H1X1 276 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 SAGE1Q9NXZ1 904 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 TJP2Q9UDY2 1190 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 SAP30BPQ9UHR5 308 aaKnown RBP5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 EVLQ9UI08 416 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 PPP1R9AQ9ULJ8 1098 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 DMTF1Q9Y222 760 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 ITSN2Q9NZM3 1697 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 ABCA6Q8N139 1617 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 ARHGAP5Q13017 1502 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 RTEL1-TNFRSF6BF6WH68 1400 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 ZNF644Q9H582 1327 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 PTPRMP28827 1452 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 TRAV20A0A0B4J274 112 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 ANKRD34BA5PLL1 514 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 MEGF11A6BM72 1044 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 F5H423 210 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 M0R2C6 588 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 DLL1O00548 723 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 PRKD3O94806 890 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 SNUPNO95149 360 aaKnown RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 APBA3O96018 575 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 MT-CO1P00395 513 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 ACRP10323 421 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 ELNP15502 786 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 SELPP16109 830 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 GLB1P16278 677 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 LPOP22079 712 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 SOX4Q06945 474 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 PCBP2Q15366 365 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 SKOR2Q2VWA4 1001 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 PRAMEF13Q5VWM6 474 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 TDRD10Q5VZ19 366 aaKnown RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 FGD2Q7Z6J4 655 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 ADAT2Q7Z6V5 191 aaKnown RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 SMYD4Q8IYR2 804 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 CBARPQ8N350 705 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 SMG8Q8ND04 991 aaKnown RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 KLHL6Q8WZ60 621 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 FUBP3Q96I24 572 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 EIF2AK1Q9BQI3 630 aaKnown RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 PLVAPQ9BX97 442 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 NAA15Q9BXJ9 866 aaKnown RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 LRRC27Q9C0I9 530 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 SUGCTQ9HAC7 445 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 TRIM39Q9HCM9 518 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 NLRC4Q9NPP4 1024 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 MAN1C1Q9NR34 630 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 KLHL11Q9NVR0 708 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 FNIP2Q9P278 1114 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 ZNF214Q9UL59 606 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 ANKRD6Q9Y2G4 727 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 PCDHGC5Q9Y5F6 944 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 SYCP2Q9BX26 1530 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 C9orf84Q5VXU9 1444 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 MIA2Q96PC5 1412 aa5.22□□□□□ -1.57
HMGB1P21-201ENST00000502313 ARHGEF5Q12774 1597 aa5.21□□□□□ -1.57
HMGB1P21-201ENST00000502313 HECW2Q9P2P5 1572 aa5.21□□□□□ -1.57
HMGB1P21-201ENST00000502313 PLEKHH2Q8IVE3 1493 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 ABHD14A-ACY1A0A1B0GW23 586 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 NOP56O00567 594 aaKnown RBP5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 RGS13O14921 159 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 OPA1O60313 960 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 DNAJA2O60884 412 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 WFS1O76024 890 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 RHOBTB3O94955 611 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 NPTXRO95502 500 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 DLGAP3O95886 979 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 NEFMP07197 916 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 U2AF1L5P0DN76 240 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 POU3F2P20265 443 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 IARSP41252 1262 aaKnown RBP5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 U2AF1Q01081 240 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 ADCY1Q08828 1119 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 CCDC96Q2M329 555 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 HYIQ5T013 277 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 C1QTNF12Q5T7M4 302 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 GPR158Q5T848 1215 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 PPP4R3AQ6IN85 833 aa5.21□□□□□ -1.58
HMGB1P21-201ENST00000502313 MAATS1Q7Z4T9 603 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms