RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 X6R8D5 127 aa8.44□□□□□ -1.06
MDM2-220ENST00000496959 GRIA2P42262 883 aa8.43□□□□□ -1.06
MDM2-220ENST00000496959 SLC6A11P48066 632 aa8.43□□□□□ -1.06
MDM2-220ENST00000496959 CACNB2Q08289 660 aaPredicted RBP8.43□□□□□ -1.06
MDM2-220ENST00000496959 LSAMPQ13449 338 aa8.43□□□□□ -1.06
MDM2-220ENST00000496959 SLC35F1Q5T1Q4 408 aa8.43□□□□□ -1.06
MDM2-220ENST00000496959 C1orf159Q96HA4 380 aa8.43□□□□□ -1.06
MDM2-220ENST00000496959 IER2Q9BTL4 223 aa8.43□□□□□ -1.06
MDM2-220ENST00000496959 PCDHA2Q9Y5H9 948 aa8.43□□□□□ -1.06
MDM2-220ENST00000496959 H7BY64 318 aa8.42□□□□□ -1.06
MDM2-220ENST00000496959 SGSM2O43147 1006 aa8.42□□□□□ -1.06
MDM2-220ENST00000496959 SP8Q8IXZ3 490 aa8.42□□□□□ -1.06
MDM2-220ENST00000496959 Q8N1Y9 231 aa8.42□□□□□ -1.06
MDM2-220ENST00000496959 FNIP1Q8TF40 1166 aa8.42□□□□□ -1.06
MDM2-220ENST00000496959 C8orf37Q96NL8 207 aa8.42□□□□□ -1.06
MDM2-220ENST00000496959 AARSD1Q9BTE6 412 aaKnown RBP8.42□□□□□ -1.06
MDM2-220ENST00000496959 PLA2G1BP04054 148 aaKnown RBP8.41□□□□□ -1.06
MDM2-220ENST00000496959 LCP1P13796 627 aa8.41□□□□□ -1.06
MDM2-220ENST00000496959 DENND5AQ6IQ26 1287 aa8.41□□□□□ -1.06
MDM2-220ENST00000496959 NLRP10Q86W26 655 aa8.41□□□□□ -1.06
MDM2-220ENST00000496959 LRRC47Q8N1G4 583 aaKnown RBP8.41□□□□□ -1.06
MDM2-220ENST00000496959 SMARCC2Q8TAQ2 1214 aa8.41□□□□□ -1.06
MDM2-220ENST00000496959 NPFFR2Q9Y5X5 522 aa8.41□□□□□ -1.06
MDM2-220ENST00000496959 HOXA5P20719 270 aa8.4□□□□□ -1.06
MDM2-220ENST00000496959 HTRA3P83110 453 aa8.4□□□□□ -1.06
MDM2-220ENST00000496959 CHRNA2Q15822 529 aa8.4□□□□□ -1.06
MDM2-220ENST00000496959 LILRA6Q6PI73 481 aa8.4□□□□□ -1.06
MDM2-220ENST00000496959 ETV3LQ6ZN32 361 aa8.4□□□□□ -1.06
MDM2-220ENST00000496959 MILR1Q7Z6M3 343 aa8.4□□□□□ -1.06
MDM2-220ENST00000496959 PCDH18Q9HCL0 1135 aa8.4□□□□□ -1.06
MDM2-220ENST00000496959 LUC7LQ9NQ29 371 aaKnown RBP8.4□□□□□ -1.06
MDM2-220ENST00000496959 CLDND1Q9NY35 253 aa8.4□□□□□ -1.06
MDM2-220ENST00000496959 FFAR3O14843 346 aa8.39□□□□□ -1.07
MDM2-220ENST00000496959 DLX3O60479 287 aa8.39□□□□□ -1.07
MDM2-220ENST00000496959 CTSWP56202 376 aa8.39□□□□□ -1.07
MDM2-220ENST00000496959 NBPF6Q5VWK0 638 aa8.39□□□□□ -1.07
MDM2-220ENST00000496959 USP53Q70EK8 1073 aa8.39□□□□□ -1.07
MDM2-220ENST00000496959 ZNF669Q96BR6 464 aaPredicted RBP8.39□□□□□ -1.07
MDM2-220ENST00000496959 NBPF4Q96M43 638 aa8.39□□□□□ -1.07
MDM2-220ENST00000496959 GPR27Q9NS67 375 aa8.39□□□□□ -1.07
MDM2-220ENST00000496959 FBXL7Q9UJT9 491 aa8.39□□□□□ -1.07
MDM2-220ENST00000496959 PALD1Q9ULE6 856 aa8.39□□□□□ -1.07
MDM2-220ENST00000496959 CYP2C8P10632 490 aa8.38□□□□□ -1.07
MDM2-220ENST00000496959 FGFR1P11362 822 aa8.38□□□□□ -1.07
MDM2-220ENST00000496959 VWA3BQ502W6 1294 aa8.38□□□□□ -1.07
MDM2-220ENST00000496959 LCE1DQ5T752 114 aa8.38□□□□□ -1.07
MDM2-220ENST00000496959 RSPO2Q6UXX9 243 aaPredicted RBP8.38□□□□□ -1.07
MDM2-220ENST00000496959 SAPCD2Q86UD0 394 aa8.38□□□□□ -1.07
MDM2-220ENST00000496959 ZC3H18Q86VM9 953 aaKnown RBP8.38□□□□□ -1.07
MDM2-220ENST00000496959 TP53I13Q8NBR0 393 aaPredicted RBP8.38□□□□□ -1.07
MDM2-220ENST00000496959 DDX11Q96FC9 970 aa8.38□□□□□ -1.07
MDM2-220ENST00000496959 TRAV20A0A0B4J274 112 aa8.37□□□□□ -1.07
MDM2-220ENST00000496959 HGSO14964 777 aaPredicted RBP8.37□□□□□ -1.07
MDM2-220ENST00000496959 PDPK1O15530 556 aa8.37□□□□□ -1.07
MDM2-220ENST00000496959 PRODHO43272 600 aa8.37□□□□□ -1.07
MDM2-220ENST00000496959 DGKIO75912 1065 aa8.37□□□□□ -1.07
MDM2-220ENST00000496959 GTF2F1P35269 517 aaKnown RBP eCLIP8.37□□□□□ -1.07
MDM2-220ENST00000496959 KCNC1P48547 511 aa8.37□□□□□ -1.07
MDM2-220ENST00000496959 LCE4AQ5TA78 99 aa8.37□□□□□ -1.07
MDM2-220ENST00000496959 NSMFQ6X4W1 530 aa8.37□□□□□ -1.07
MDM2-220ENST00000496959 MIB1Q86YT6 1006 aa8.37□□□□□ -1.07
MDM2-220ENST00000496959 HIRIP3Q9BW71 556 aaPredicted RBP8.37□□□□□ -1.07
MDM2-220ENST00000496959 EPB41L1Q9H4G0 881 aa8.37□□□□□ -1.07
MDM2-220ENST00000496959 NGRNQ9NPE2 291 aaKnown RBP8.37□□□□□ -1.07
MDM2-220ENST00000496959 ARHGEF4Q9NR80 690 aa8.37□□□□□ -1.07
MDM2-220ENST00000496959 ZNF652Q9Y2D9 606 aa8.37□□□□□ -1.07
MDM2-220ENST00000496959 MSRB2Q9Y3D2 182 aa8.37□□□□□ -1.07
MDM2-220ENST00000496959 PABPC1P11940 636 aaKnown RBP8.36□□□□□ -1.07
MDM2-220ENST00000496959 CD300LDQ6UXZ3 194 aa8.36□□□□□ -1.07
MDM2-220ENST00000496959 ZNF526Q8TF50 670 aaPredicted RBP8.36□□□□□ -1.07
MDM2-220ENST00000496959 DCAF4Q8WV16 495 aa8.36□□□□□ -1.07
MDM2-220ENST00000496959 YIPF4Q9BSR8 244 aa8.36□□□□□ -1.07
MDM2-220ENST00000496959 XYLT2Q9H1B5 865 aa8.36□□□□□ -1.07
MDM2-220ENST00000496959 SH3D21A4FU49 640 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 OTOL1A6NHN0 477 aaPredicted RBP8.35□□□□□ -1.07
MDM2-220ENST00000496959 SMARCA5O60264 1052 aaPredicted RBP8.35□□□□□ -1.07
MDM2-220ENST00000496959 C8BP07358 591 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 SLURP1P55000 103 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 STEAP3Q658P3 488 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 LIPIQ6XZB0 460 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 TTLL7Q6ZT98 887 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 FAM126BQ8IXS8 530 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 FEZF2Q8TBJ5 459 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 ZBTB8AQ96BR9 441 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 ARMC5Q96C12 935 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 C20orf173Q96LM9 149 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 NOX5Q96PH1 765 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 PHF20Q9BVI0 1012 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 SPATA9Q9BWV2 254 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 CCDC113Q9H0I3 377 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 SIRPGQ9P1W8 387 aa8.35□□□□□ -1.07
MDM2-220ENST00000496959 MAFKO60675 156 aa8.34□□□□□ -1.07
MDM2-220ENST00000496959 IFRD2Q12894 506 aaPredicted RBP8.34□□□□□ -1.07
MDM2-220ENST00000496959 RASGRF1Q13972 1273 aa8.34□□□□□ -1.07
MDM2-220ENST00000496959 MTERF2Q49AM1 385 aa8.34□□□□□ -1.07
MDM2-220ENST00000496959 EMC4Q5J8M3 183 aa8.34□□□□□ -1.07
MDM2-220ENST00000496959 DPH6Q7L8W6 267 aa8.34□□□□□ -1.07
MDM2-220ENST00000496959 ZDHHC14Q8IZN3 488 aa8.34□□□□□ -1.07
MDM2-220ENST00000496959 ADGRG2Q8IZP9 1017 aa8.34□□□□□ -1.07
MDM2-220ENST00000496959 SYT8Q8NBV8 401 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms