RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CDC37Q16543 378 aaPredicted RBP16.67■□□□□ 0.26
VARS-228ENST00000495010 CCDC178Q5BJE1 867 aa16.67■□□□□ 0.26
VARS-228ENST00000495010 ARHGEF16Q5VV41 709 aa16.67■□□□□ 0.26
VARS-228ENST00000495010 TGS1Q96RS0 853 aaKnown RBP16.67■□□□□ 0.26
VARS-228ENST00000495010 RMDN3Q96TC7 470 aa16.67■□□□□ 0.26
VARS-228ENST00000495010 ZKSCAN3Q9BRR0 538 aa16.67■□□□□ 0.26
VARS-228ENST00000495010 KAT14Q9H8E8 782 aa16.67■□□□□ 0.26
VARS-228ENST00000495010 GTF2IRD1Q9UHL9 959 aa16.67■□□□□ 0.26
VARS-228ENST00000495010 ARIH1Q9Y4X5 557 aaPredicted RBP16.67■□□□□ 0.26
VARS-228ENST00000495010 BDP1A6H8Y1 2624 aa16.67■□□□□ 0.26
VARS-228ENST00000495010 TRIP12Q14669 1992 aaPredicted RBP16.66■□□□□ 0.26
VARS-228ENST00000495010 TRIM6-TRIM34B2RNG4 842 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 CKBP12277 381 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 PSEN2P49810 448 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 PDE1AP54750 535 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
VARS-228ENST00000495010 DEFB103AP81534 67 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 NMIQ13287 307 aaPredicted RBP16.66■□□□□ 0.26
VARS-228ENST00000495010 SPRED2Q7Z698 418 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 IQCA1Q86XH1 822 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 DGKHQ86XP1 1220 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 TICAM2Q86XR7 235 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 SYTL5Q8TDW5 730 aaPredicted RBP16.66■□□□□ 0.26
VARS-228ENST00000495010 KAT2BQ92831 832 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 CPVLQ9H3G5 476 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 HDAC6Q9UBN7 1215 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 MRPL11Q9Y3B7 192 aaKnown RBP16.66■□□□□ 0.26
VARS-228ENST00000495010 MRVI1Q9Y6F6 885 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 SALL3Q9BXA9 1300 aa16.66■□□□□ 0.26
VARS-228ENST00000495010 CHD7Q9P2D1 2997 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 NBNO60934 754 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 GJB5O95377 273 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 CXCL10P02778 98 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 RBL2Q08999 1139 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 PTK7Q13308 1070 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 LAMC2Q13753 1193 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 MFSD10Q14728 455 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 FAM117BQ6P1L5 589 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 PNMA1Q8ND90 353 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 TET1Q8NFU7 2136 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 TBC1D5Q92609 795 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 DHX38Q92620 1227 aaKnown RBP16.65■□□□□ 0.26
VARS-228ENST00000495010 CTAGE1Q96RT6 745 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 CCDC171Q6TFL3 1326 aa16.65■□□□□ 0.26
VARS-228ENST00000495010 ZNF213O14771 459 aa16.64■□□□□ 0.25
VARS-228ENST00000495010 EIF3JO75822 258 aaKnown RBP16.64■□□□□ 0.25
VARS-228ENST00000495010 EIF2AK2P19525 551 aaKnown RBP16.64■□□□□ 0.25
VARS-228ENST00000495010 ERVK-21P61565 698 aa16.64■□□□□ 0.25
VARS-228ENST00000495010 GPNMBQ14956 572 aa16.64■□□□□ 0.25
VARS-228ENST00000495010 KIAA0753Q2KHM9 967 aa16.64■□□□□ 0.25
VARS-228ENST00000495010 ZNF589Q86UQ0 364 aaPredicted RBP16.64■□□□□ 0.25
VARS-228ENST00000495010 FBXO11Q86XK2 927 aa16.64■□□□□ 0.25
VARS-228ENST00000495010 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
VARS-228ENST00000495010 DHX37Q8IY37 1157 aaKnown RBP16.64■□□□□ 0.25
VARS-228ENST00000495010 ADGRF4Q8IZF3 695 aa16.64■□□□□ 0.25
VARS-228ENST00000495010 RILPL2Q969X0 211 aa16.64■□□□□ 0.25
VARS-228ENST00000495010 UBE2ZQ9H832 354 aaPredicted RBP16.64■□□□□ 0.25
VARS-228ENST00000495010 SUGCTQ9HAC7 445 aa16.64■□□□□ 0.25
VARS-228ENST00000495010 VAT1LQ9HCJ6 419 aa16.64■□□□□ 0.25
VARS-228ENST00000495010 DDX41Q9UJV9 622 aaKnown RBP16.64■□□□□ 0.25
VARS-228ENST00000495010 COL4A4P53420 1690 aaPredicted RBP16.64■□□□□ 0.25
VARS-228ENST00000495010 LINC01553A4QN01 128 aa16.63■□□□□ 0.25
VARS-228ENST00000495010 GPR37L1O60883 481 aa16.63■□□□□ 0.25
VARS-228ENST00000495010 CFBP00751 764 aa16.63■□□□□ 0.25
VARS-228ENST00000495010 ZNF286BP0CG31 522 aa16.63■□□□□ 0.25
VARS-228ENST00000495010 HOXD11P31277 338 aaPredicted RBP16.63■□□□□ 0.25
VARS-228ENST00000495010 NT5C2P49902 561 aa16.63■□□□□ 0.25
VARS-228ENST00000495010 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
VARS-228ENST00000495010 PPTC7Q8NI37 304 aa16.63■□□□□ 0.25
VARS-228ENST00000495010 EMID1Q96A84 441 aaPredicted RBP16.63■□□□□ 0.25
VARS-228ENST00000495010 COL20A1Q9P218 1284 aa16.63■□□□□ 0.25
VARS-228ENST00000495010 INSL6Q9Y581 213 aa16.63■□□□□ 0.25
VARS-228ENST00000495010 PTPRSQ13332 1948 aa16.62■□□□□ 0.25
VARS-228ENST00000495010 FAM86C2PA6NEL3 165 aa16.62■□□□□ 0.25
VARS-228ENST00000495010 LGR5O75473 907 aa16.62■□□□□ 0.25
VARS-228ENST00000495010 AMHP03971 560 aa16.62■□□□□ 0.25
VARS-228ENST00000495010 NR3C2P08235 984 aa16.62■□□□□ 0.25
VARS-228ENST00000495010 PARP1P09874 1014 aaKnown RBP16.62■□□□□ 0.25
VARS-228ENST00000495010 QRICH1Q2TAL8 776 aa16.62■□□□□ 0.25
VARS-228ENST00000495010 ZNF618Q5T7W0 954 aa16.62■□□□□ 0.25
VARS-228ENST00000495010 FBXO22Q8NEZ5 403 aa16.62■□□□□ 0.25
VARS-228ENST00000495010 CTNNA3Q9UI47 895 aa16.62■□□□□ 0.25
VARS-228ENST00000495010 NEDD4P46934 1319 aa16.62■□□□□ 0.25
VARS-228ENST00000495010 EMSYQ7Z589 1322 aa16.62■□□□□ 0.25
VARS-228ENST00000495010 PI4K2BG5E9Z4 385 aa16.61■□□□□ 0.25
VARS-228ENST00000495010 KDM4AO75164 1064 aa16.61■□□□□ 0.25
VARS-228ENST00000495010 F2P00734 622 aa16.61■□□□□ 0.25
VARS-228ENST00000495010 MYCLP12524 364 aaPredicted RBP16.61■□□□□ 0.25
VARS-228ENST00000495010 KCNA5P22460 613 aa16.61■□□□□ 0.25
VARS-228ENST00000495010 SSTR3P32745 418 aaPredicted RBP16.61■□□□□ 0.25
VARS-228ENST00000495010 KCNV1Q6PIU1 500 aa16.61■□□□□ 0.25
VARS-228ENST00000495010 MYOCDQ8IZQ8 938 aa16.61■□□□□ 0.25
VARS-228ENST00000495010 ZSCAN10Q96SZ4 725 aaPredicted RBP16.61■□□□□ 0.25
VARS-228ENST00000495010 PXMP2Q9NR77 195 aa16.61■□□□□ 0.25
VARS-228ENST00000495010 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.6■□□□□ 0.25
VARS-228ENST00000495010 HAS3O00219 553 aa16.6■□□□□ 0.25
VARS-228ENST00000495010 SORBS3O60504 671 aa16.6■□□□□ 0.25
VARS-228ENST00000495010 PPFIA4O75335 1185 aa16.6■□□□□ 0.25
VARS-228ENST00000495010 THPOP40225 353 aa16.6■□□□□ 0.25
VARS-228ENST00000495010 ZNF200P98182 395 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms