RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 CYP2C8P10632 490 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 TOP1P11387 765 aaKnown RBP7.9□□□□□ -1.14
VPS52-219ENST00000493379 HOXD10P28358 340 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 HERVK_113P62684 666 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 GADL1Q6ZQY3 521 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 IQCA1Q86XH1 822 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 CLEC10AQ8IUN9 316 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 MB21D2Q8IYB1 491 aaPredicted RBP7.9□□□□□ -1.14
VPS52-219ENST00000493379 MB21D1Q8N884 522 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 REPS2Q8NFH8 660 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 NCOA7Q8NI08 942 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 ZSCAN10Q96SZ4 725 aaPredicted RBP7.9□□□□□ -1.14
VPS52-219ENST00000493379 LBHD1Q9BQE6 289 aaPredicted RBP7.9□□□□□ -1.14
VPS52-219ENST00000493379 TMEM47Q9BQJ4 181 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 RPAP3Q9H6T3 665 aaPredicted RBP7.9□□□□□ -1.14
VPS52-219ENST00000493379 CD320Q9NPF0 282 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 ANO2Q9NQ90 1003 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 IVNS1ABPQ9Y6Y0 642 aa7.9□□□□□ -1.14
VPS52-219ENST00000493379 CHD9Q3L8U1 2897 aa7.9□□□□□ -1.15
VPS52-219ENST00000493379 DOCK3Q8IZD9 2030 aa7.9□□□□□ -1.15
VPS52-219ENST00000493379 LOC285556D6RIA3 1793 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 LRRC37A2A6NM11 1700 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 NCOR2Q9Y618 2525 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 B4E1Z4 1266 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 CNMDO75829 334 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 IGHA2P01877 340 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 LIFRP42702 1097 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 ANTXR2P58335 489 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 SH3BP2P78314 561 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 CLDN10P78369 228 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 TRDNQ13061 729 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 ADGRE1Q14246 886 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 KRT32Q14532 448 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 RNF20Q5VTR2 975 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 CYB5R4Q7L1T6 521 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 ANKMY2Q8IV38 441 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 STK11IPQ8N1F8 1099 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 TMTC2Q8N394 836 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 ENAHQ8N8S7 591 aaPredicted RBP7.89□□□□□ -1.15
VPS52-219ENST00000493379 PRPF38AQ8NAV1 312 aaKnown RBP7.89□□□□□ -1.15
VPS52-219ENST00000493379 FAM200AQ8TCP9 573 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 MAP3K14Q99558 947 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 FEZ1Q99689 392 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 C1QTNF2Q9BXJ5 285 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 AGXT2Q9BYV1 514 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.89□□□□□ -1.15
VPS52-219ENST00000493379 PRDM12Q9H4Q4 367 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 TXNRD2Q9NNW7 524 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 PPP1R9AQ9ULJ8 1098 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 DOLKQ9UPQ8 538 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 TRANK1O15050 2925 aa7.89□□□□□ -1.15
VPS52-219ENST00000493379 ATAD5Q96QE3 1844 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 PI4K2BG5E9Z4 385 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 HMGB1P09429 215 aaKnown RBP7.88□□□□□ -1.15
VPS52-219ENST00000493379 PDHBP11177 359 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 BMP3P12645 472 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 ITGB8P26012 769 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 SMARCA1P28370 1054 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 OAZ1P54368 228 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 EVCP57679 992 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 IRX3P78415 501 aaPredicted RBP7.88□□□□□ -1.15
VPS52-219ENST00000493379 TROAPQ12815 778 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 COL9A3Q14050 684 aaPredicted RBP7.88□□□□□ -1.15
VPS52-219ENST00000493379 SLFN13Q68D06 897 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 PHLDB3Q6NSJ2 640 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 FAM160B2Q86V87 743 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 SGMS1Q86VZ5 419 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 TRIM50Q86XT4 487 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 ANKLE1Q8NAG6 615 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 RGS22Q8NE09 1264 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 SHCBP1Q8NEM2 672 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 GPRC5AQ8NFJ5 357 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 CHURC1Q8WUH1 139 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 DCAF4Q8WV16 495 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 USP6NLQ92738 828 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 TMEM87BQ96K49 555 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 CNTNAP3BQ96NU0 1288 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 GAS2L1Q99501 681 aaPredicted RBP7.88□□□□□ -1.15
VPS52-219ENST00000493379 CNTNAP3Q9BZ76 1288 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 TM6SF1Q9BZW5 370 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 MAF1Q9H063 256 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 ZNF576Q9H609 170 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 CXXC1Q9P0U4 656 aaPredicted RBP7.88□□□□□ -1.15
VPS52-219ENST00000493379 FEM1BQ9UK73 627 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 GJD2Q9UKL4 321 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 STX8Q9UNK0 236 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 GNEQ9Y223 722 aaKnown RBP7.88□□□□□ -1.15
VPS52-219ENST00000493379 NOD1Q9Y239 953 aa7.88□□□□□ -1.15
VPS52-219ENST00000493379 TNKSO95271 1327 aa7.87□□□□□ -1.15
VPS52-219ENST00000493379 MED19A0JLT2 244 aaPredicted RBP7.87□□□□□ -1.15
VPS52-219ENST00000493379 ESPNB1AK53 854 aa7.87□□□□□ -1.15
VPS52-219ENST00000493379 VWA5AO00534 786 aa7.87□□□□□ -1.15
VPS52-219ENST00000493379 STRNO43815 780 aa7.87□□□□□ -1.15
VPS52-219ENST00000493379 ZKSCAN1P17029 563 aaPredicted RBP7.87□□□□□ -1.15
VPS52-219ENST00000493379 IGFBP4P22692 258 aa7.87□□□□□ -1.15
VPS52-219ENST00000493379 MCCP23508 829 aa7.87□□□□□ -1.15
VPS52-219ENST00000493379 MCM5P33992 734 aa7.87□□□□□ -1.15
VPS52-219ENST00000493379 SLC1A4P43007 532 aa7.87□□□□□ -1.15
VPS52-219ENST00000493379 FLT3LGP49771 235 aa7.87□□□□□ -1.15
VPS52-219ENST00000493379 ATP1A2P50993 1020 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms