RNA–Protein interactions for RNA: ENST00000491294.1

ARPC1B-220, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 1,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-220ENST00000491294 PGM5Q15124 567 aa20.53■□□□□ 0.88
ARPC1B-220ENST00000491294 TMEM240Q5SV17 173 aa20.53■□□□□ 0.88
ARPC1B-220ENST00000491294 ZNF697Q5TEC3 545 aa20.53■□□□□ 0.88
ARPC1B-220ENST00000491294 KCNV1Q6PIU1 500 aa20.53■□□□□ 0.88
ARPC1B-220ENST00000491294 C16orf59Q7L2K0 433 aa20.53■□□□□ 0.88
ARPC1B-220ENST00000491294 FCHSD1Q86WN1 690 aa20.53■□□□□ 0.88
ARPC1B-220ENST00000491294 NOC4LQ9BVI4 516 aaKnown RBP20.53■□□□□ 0.88
ARPC1B-220ENST00000491294 TRMT13Q9NUP7 481 aaKnown RBP20.53■□□□□ 0.88
ARPC1B-220ENST00000491294 SLC12A7Q9Y666 1083 aa20.53■□□□□ 0.88
ARPC1B-220ENST00000491294 PTPN11Q06124 597 aaPredicted RBP20.52■□□□□ 0.88
ARPC1B-220ENST00000491294 LAMC2Q13753 1193 aa20.52■□□□□ 0.88
ARPC1B-220ENST00000491294 TSGA10IPQ3SY00 556 aa20.52■□□□□ 0.88
ARPC1B-220ENST00000491294 FAM47CQ5HY64 1035 aa20.52■□□□□ 0.88
ARPC1B-220ENST00000491294 PSRC1Q6PGN9 363 aaPredicted RBP20.52■□□□□ 0.88
ARPC1B-220ENST00000491294 SGMS1Q86VZ5 419 aa20.52■□□□□ 0.88
ARPC1B-220ENST00000491294 SRBD1Q8N5C6 995 aaKnown RBP20.52■□□□□ 0.88
ARPC1B-220ENST00000491294 EMID1Q96A84 441 aaPredicted RBP20.52■□□□□ 0.88
ARPC1B-220ENST00000491294 NEK1Q96PY6 1258 aa20.52■□□□□ 0.88
ARPC1B-220ENST00000491294 LRRC2Q9BYS8 371 aa20.52■□□□□ 0.88
ARPC1B-220ENST00000491294 IL23AQ9NPF7 189 aa20.52■□□□□ 0.88
ARPC1B-220ENST00000491294 SEC63Q9UGP8 760 aaKnown RBP20.52■□□□□ 0.88
ARPC1B-220ENST00000491294 SCN10AQ9Y5Y9 1956 aa20.52■□□□□ 0.87
ARPC1B-220ENST00000491294 UMODL1Q5DID0 1318 aa20.52■□□□□ 0.87
ARPC1B-220ENST00000491294 KIAA1217Q5T5P2 1943 aa20.51■□□□□ 0.87
ARPC1B-220ENST00000491294 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.51■□□□□ 0.87
ARPC1B-220ENST00000491294 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.51■□□□□ 0.87
ARPC1B-220ENST00000491294 RGS20O76081 388 aa20.51■□□□□ 0.87
ARPC1B-220ENST00000491294 PLEKHA8P1O95397 391 aa20.51■□□□□ 0.87
ARPC1B-220ENST00000491294 ACRP10323 421 aa20.51■□□□□ 0.87
ARPC1B-220ENST00000491294 RXRAP19793 462 aa20.51■□□□□ 0.87
ARPC1B-220ENST00000491294 CASTP20810 708 aaKnown RBP20.51■□□□□ 0.87
ARPC1B-220ENST00000491294 CCND2P30279 289 aa20.51■□□□□ 0.87
ARPC1B-220ENST00000491294 STXBP5LQ9Y2K9 1186 aa20.51■□□□□ 0.87
ARPC1B-220ENST00000491294 TGFB3P10600 412 aa20.5■□□□□ 0.87
ARPC1B-220ENST00000491294 CCL23P55773 120 aa20.5■□□□□ 0.87
ARPC1B-220ENST00000491294 DGKDQ16760 1214 aa20.5■□□□□ 0.87
ARPC1B-220ENST00000491294 SYNE3Q6ZMZ3 975 aa20.5■□□□□ 0.87
ARPC1B-220ENST00000491294 ZNF365Q70YC5 407 aa20.5■□□□□ 0.87
ARPC1B-220ENST00000491294 DHX37Q8IY37 1157 aaKnown RBP20.5■□□□□ 0.87
ARPC1B-220ENST00000491294 FANCBQ8NB91 859 aa20.5■□□□□ 0.87
ARPC1B-220ENST00000491294 IL31RAQ8NI17 732 aa20.5■□□□□ 0.87
ARPC1B-220ENST00000491294 CYP2C9P11712 490 aa20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 EXOSC10Q01780 885 aaKnown RBP20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 KRT32Q14532 448 aa20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 RASIP1Q5U651 963 aa20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 DHX32Q7L7V1 743 aaKnown RBP20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 RASEFQ8IZ41 740 aa20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 RPUSD2Q8IZ73 545 aaKnown RBP20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 CMTR1Q8N1G2 835 aaKnown RBP20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 PPTC7Q8NI37 304 aa20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 CUL5Q93034 780 aa20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 FAM161BQ96MY7 647 aa20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 WNT8AQ9H1J5 351 aa20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 SEMA6BQ9H3T3 888 aa20.49■□□□□ 0.87
ARPC1B-220ENST00000491294 PIK3CDO00329 1044 aa20.48■□□□□ 0.87
ARPC1B-220ENST00000491294 STAM2O75886 525 aa20.48■□□□□ 0.87
ARPC1B-220ENST00000491294 FGBP02675 491 aa20.48■□□□□ 0.87
ARPC1B-220ENST00000491294 MYSM1Q5VVJ2 828 aa20.48■□□□□ 0.87
ARPC1B-220ENST00000491294 TMTC3Q6ZXV5 915 aa20.48■□□□□ 0.87
ARPC1B-220ENST00000491294 RAB11FIP4Q86YS3 637 aa20.48■□□□□ 0.87
ARPC1B-220ENST00000491294 SMARCC2Q8TAQ2 1214 aa20.48■□□□□ 0.87
ARPC1B-220ENST00000491294 HERVK_113Q902F9 699 aa20.48■□□□□ 0.87
ARPC1B-220ENST00000491294 KAT2BQ92831 832 aa20.48■□□□□ 0.87
ARPC1B-220ENST00000491294 GUCD1Q96NT3 240 aa20.48■□□□□ 0.87
ARPC1B-220ENST00000491294 FRMPD4Q14CM0 1322 aa20.48■□□□□ 0.87
ARPC1B-220ENST00000491294 CHMP4BP1P59074 171 aa20.47■□□□□ 0.87
ARPC1B-220ENST00000491294 ADCK5Q3MIX3 580 aa20.47■□□□□ 0.87
ARPC1B-220ENST00000491294 GNPTABQ3T906 1256 aa20.47■□□□□ 0.87
ARPC1B-220ENST00000491294 CELF3Q5SZQ8 465 aaKnown RBP20.47■□□□□ 0.87
ARPC1B-220ENST00000491294 USP17L6PQ6QN14 398 aa20.47■□□□□ 0.87
ARPC1B-220ENST00000491294 SESTD1Q86VW0 696 aa20.47■□□□□ 0.87
ARPC1B-220ENST00000491294 MICU3Q86XE3 530 aa20.47■□□□□ 0.87
ARPC1B-220ENST00000491294 PPP1R13LQ8WUF5 828 aa20.47■□□□□ 0.87
ARPC1B-220ENST00000491294 ZFP91Q96JP5 570 aaPredicted RBP20.47■□□□□ 0.87
ARPC1B-220ENST00000491294 KATNAL1Q9BW62 490 aa20.47■□□□□ 0.87
ARPC1B-220ENST00000491294 MTIF3Q9H2K0 278 aaKnown RBP20.47■□□□□ 0.87
ARPC1B-220ENST00000491294 TMEM265A0A087WTH1 108 aa20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 MEIS2O14770 477 aa20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 PPFIA4O75335 1185 aa20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 GGPS1O95749 300 aa20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 HMGB1P09429 215 aaKnown RBP20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 HOXD8P13378 290 aaPredicted RBP20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 MRPS9P82933 396 aaKnown RBP20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 SP2Q02086 613 aa20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 CCDC82Q8N4S0 544 aa20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 SCLYQ96I15 445 aa20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 TCEANC2Q96MN5 208 aa20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 SPATA33Q96N06 139 aa20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 RBM28Q9NW13 759 aaKnown RBP20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 NOD1Q9Y239 953 aa20.46■□□□□ 0.87
ARPC1B-220ENST00000491294 UBA1P22314 1058 aaKnown RBP20.45■□□□□ 0.86
ARPC1B-220ENST00000491294 ICAM3P32942 547 aa20.45■□□□□ 0.86
ARPC1B-220ENST00000491294 PSEN2P49810 448 aa20.45■□□□□ 0.86
ARPC1B-220ENST00000491294 BFSP2Q13515 415 aa20.45■□□□□ 0.86
ARPC1B-220ENST00000491294 PTGISQ16647 500 aa20.45■□□□□ 0.86
ARPC1B-220ENST00000491294 XRRA1Q6P2D8 792 aa20.45■□□□□ 0.86
ARPC1B-220ENST00000491294 APOA5Q6Q788 366 aa20.45■□□□□ 0.86
ARPC1B-220ENST00000491294 RETREG2Q8NC44 543 aa20.45■□□□□ 0.86
ARPC1B-220ENST00000491294 GPKOWQ92917 476 aaPredicted RBP eCLIP20.45■□□□□ 0.86
ARPC1B-220ENST00000491294 KCNB2Q92953 911 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms