RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 VAT1LQ9HCJ6 419 aa13.75□□□□□ -0.21
SRSF4-204ENST00000489898 DDX41Q9UJV9 622 aaKnown RBP13.75□□□□□ -0.21
SRSF4-204ENST00000489898 RALGAPA2Q2PPJ7 1873 aa13.75□□□□□ -0.21
SRSF4-204ENST00000489898 HAS3O00219 553 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 F2P00734 622 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 NR3C2P08235 984 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 ACRP10323 421 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 TXNP10599 105 aaKnown RBP13.74□□□□□ -0.21
SRSF4-204ENST00000489898 RXRAP19793 462 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 HOXC8P31273 242 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 TCTN1Q2MV58 587 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 TYW1BQ6NUM6 668 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 SGMS1Q86VZ5 419 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 HOMER1Q86YM7 354 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 NSUN6Q8TEA1 469 aaKnown RBP13.74□□□□□ -0.21
SRSF4-204ENST00000489898 AFG1LQ8WV93 481 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 KCNB2Q92953 911 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 RNPC3Q96LT9 517 aaKnown RBP13.74□□□□□ -0.21
SRSF4-204ENST00000489898 IWS1Q96ST2 819 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 LRRC2Q9BYS8 371 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 AP5M1Q9H0R1 490 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 MRPL11Q9Y3B7 192 aaKnown RBP13.74□□□□□ -0.21
SRSF4-204ENST00000489898 PCDHA1Q9Y5I3 950 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 TTC28Q96AY4 2481 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 BDP1A6H8Y1 2624 aa13.74□□□□□ -0.21
SRSF4-204ENST00000489898 GRXCR1A8MXD5 290 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 MEIS2O14770 477 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 CFBP00751 764 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 CYP2C9P11712 490 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 UBA1P22314 1058 aaKnown RBP13.73□□□□□ -0.21
SRSF4-204ENST00000489898 PBX2P40425 430 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 CPT1AP50416 773 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 EXOSC10Q01780 885 aaKnown RBP13.73□□□□□ -0.21
SRSF4-204ENST00000489898 RBL2Q08999 1139 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 NBPF20Q3BBV1 942 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 RALYLQ86SE5 291 aaKnown RBP13.73□□□□□ -0.21
SRSF4-204ENST00000489898 VSIG10LQ86VR7 867 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 SESTD1Q86VW0 696 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 CMTR1Q8N1G2 835 aaKnown RBP13.73□□□□□ -0.21
SRSF4-204ENST00000489898 MTG1Q9BT17 334 aaPredicted RBP13.73□□□□□ -0.21
SRSF4-204ENST00000489898 HIPK3Q9H422 1215 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 IL23AQ9NPF7 189 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 POLR3EQ9NVU0 708 aa13.73□□□□□ -0.21
SRSF4-204ENST00000489898 C5orf42Q9H799 3197 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 PNMA6FA0A0J9YX94 578 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 DNAJB2P25686 324 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 LIFRP42702 1097 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 TRDNQ13061 729 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 MKRN4PQ13434 485 aaPredicted RBP13.72□□□□□ -0.21
SRSF4-204ENST00000489898 TTLL4Q14679 1199 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 TRIM71Q2Q1W2 868 aaKnown RBP13.72□□□□□ -0.21
SRSF4-204ENST00000489898 HSDL1Q3SXM5 330 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 TSGA10IPQ3SY00 556 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 NFRKBQ6P4R8 1299 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 TMTC3Q6ZXV5 915 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 ZNF365Q70YC5 407 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 NOL8Q76FK4 1167 aaKnown RBP13.72□□□□□ -0.21
SRSF4-204ENST00000489898 MCF2L2Q86YR7 1114 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 RAB11FIP4Q86YS3 637 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 HERVK_113Q902F9 699 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 SCLYQ96I15 445 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 ZFP91Q96JP5 570 aaPredicted RBP13.72□□□□□ -0.21
SRSF4-204ENST00000489898 TCEANC2Q96MN5 208 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 FAM161BQ96MY7 647 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 INPP4AQ96PE3 977 aaPredicted RBP13.72□□□□□ -0.21
SRSF4-204ENST00000489898 PBX4Q9BYU1 374 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 SEMA6BQ9H3T3 888 aa13.72□□□□□ -0.21
SRSF4-204ENST00000489898 FAM217BQ9NTX9 383 aaPredicted RBP13.72□□□□□ -0.21
SRSF4-204ENST00000489898 PIK3CDO00329 1044 aa13.71□□□□□ -0.21
SRSF4-204ENST00000489898 ARHGEF15O94989 841 aa13.71□□□□□ -0.21
SRSF4-204ENST00000489898 MYL3P08590 195 aa13.71□□□□□ -0.21
SRSF4-204ENST00000489898 ZNF286BP0CG31 522 aa13.71□□□□□ -0.21
SRSF4-204ENST00000489898 PPIGQ13427 754 aaKnown RBP eCLIP13.71□□□□□ -0.213e-10■■□□□ 13.2
SRSF4-204ENST00000489898 STXBP2Q15833 593 aa13.71□□□□□ -0.21
SRSF4-204ENST00000489898 MYSM1Q5VVJ2 828 aa13.71□□□□□ -0.21
SRSF4-204ENST00000489898 GDF6Q6KF10 455 aaPredicted RBP13.71□□□□□ -0.21
SRSF4-204ENST00000489898 APOA5Q6Q788 366 aa13.71□□□□□ -0.21
SRSF4-204ENST00000489898 SEPT14Q6ZU15 432 aa13.71□□□□□ -0.21
SRSF4-204ENST00000489898 TMEM87BQ96K49 555 aa13.71□□□□□ -0.21
SRSF4-204ENST00000489898 CDX2Q99626 313 aaPredicted RBP13.71□□□□□ -0.21
SRSF4-204ENST00000489898 SEZ6LQ9BYH1 1024 aa13.71□□□□□ -0.21
SRSF4-204ENST00000489898 ANO2Q9NQ90 1003 aa13.71□□□□□ -0.21
SRSF4-204ENST00000489898 MAP3K20Q9NYL2 800 aaKnown RBP13.71□□□□□ -0.21
SRSF4-204ENST00000489898 BRPF3Q9ULD4 1205 aa13.71□□□□□ -0.21
SRSF4-204ENST00000489898 YBX2Q9Y2T7 364 aaKnown RBP13.71□□□□□ -0.21
SRSF4-204ENST00000489898 MYH9P35579 1960 aaKnown RBP13.71□□□□□ -0.22
SRSF4-204ENST00000489898 ARID2Q68CP9 1835 aa13.7□□□□□ -0.22
SRSF4-204ENST00000489898 TMEM265A0A087WTH1 108 aa13.7□□□□□ -0.22
SRSF4-204ENST00000489898 ADAMTS3O15072 1205 aa13.7□□□□□ -0.22
SRSF4-204ENST00000489898 TLR3O15455 904 aaKnown RBP13.7□□□□□ -0.22
SRSF4-204ENST00000489898 DHX16O60231 1041 aaKnown RBP13.7□□□□□ -0.22
SRSF4-204ENST00000489898 EIF3JO75822 258 aaKnown RBP13.7□□□□□ -0.22
SRSF4-204ENST00000489898 GH1P01241 217 aa13.7□□□□□ -0.22
SRSF4-204ENST00000489898 SMARCA1P28370 1054 aa13.7□□□□□ -0.22
SRSF4-204ENST00000489898 CCL23P55773 120 aa13.7□□□□□ -0.22
SRSF4-204ENST00000489898 MBTPS1Q14703 1052 aa13.7□□□□□ -0.22
SRSF4-204ENST00000489898 PSRC1Q6PGN9 363 aaPredicted RBP13.7□□□□□ -0.22
SRSF4-204ENST00000489898 SAMD3Q8N6K7 520 aa13.7□□□□□ -0.22
SRSF4-204ENST00000489898 PPTC7Q8NI37 304 aa13.7□□□□□ -0.22
SRSF4-204ENST00000489898 C16orf70Q9BSU1 422 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 342.4 ms