RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 SMARCA1P28370 1054 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 ANTXR2P58335 489 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 LAMC2Q13753 1193 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 DGKDQ16760 1214 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 SLC35G1Q2M3R5 365 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 VSIG10LQ86VR7 867 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 HOMER1Q86YM7 354 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 MAFAQ8NHW3 353 aaPredicted RBP15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 PPTC7Q8NI37 304 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 MYLIPQ8WY64 445 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 PIGSQ96S52 555 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 SENP2Q9HC62 589 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 MRVI1Q9Y6F6 885 aa15.15■□□□□ 0.02
ATPAF2-207ENST00000488753 EYSQ5T1H1 3165 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 GCOM1H8Y6P7 765 aaPredicted RBP15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 POLR2MP0CAP2 368 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 TGFB3P10600 412 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 KIF5BP33176 963 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 BFSP2Q13515 415 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 GRIN2CQ14957 1233 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 CASC1Q6TDU7 716 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 CHST3Q7LGC8 479 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 OTOP2Q7RTS6 562 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 TMTC2Q8N394 836 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 SCLYQ96I15 445 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 KATNAL1Q9BW62 490 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 CXXC1Q9P0U4 656 aaPredicted RBP15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 MSRAQ9UJ68 235 aa15.14■□□□□ 0.01
ATPAF2-207ENST00000488753 HOXD8P13378 290 aaPredicted RBP15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 MCM5P33992 734 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 PGM5Q15124 567 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 DHX37Q8IY37 1157 aaKnown RBP15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 CCDC155Q8N6L0 562 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 RETREG2Q8NC44 543 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 CTCFLQ8NI51 663 aaPredicted RBP15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 CAGE1Q8TC20 777 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 KAT2BQ92831 832 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 VWCEQ96DN2 955 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 TMEM87BQ96K49 555 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 LZTS2Q9BRK4 669 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 ESYT1Q9BSJ8 1104 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 SPZ1Q9BXG8 430 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 LSG1Q9H089 658 aaKnown RBP15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 LY9Q9HBG7 655 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 NOD1Q9Y239 953 aa15.13■□□□□ 0.01
ATPAF2-207ENST00000488753 GRXCR1A8MXD5 290 aa15.12■□□□□ 0.01
ATPAF2-207ENST00000488753 STAM2O75886 525 aa15.12■□□□□ 0.01
ATPAF2-207ENST00000488753 RGS20O76081 388 aa15.12■□□□□ 0.01
ATPAF2-207ENST00000488753 F2P00734 622 aa15.12■□□□□ 0.01
ATPAF2-207ENST00000488753 IQCF3P0C7M6 154 aa15.12■□□□□ 0.01
ATPAF2-207ENST00000488753 CCND2P30279 289 aa15.12■□□□□ 0.01
ATPAF2-207ENST00000488753 HOXA13P31271 388 aaPredicted RBP15.12■□□□□ 0.01
ATPAF2-207ENST00000488753 PBX2P40425 430 aa15.12■□□□□ 0.01
ATPAF2-207ENST00000488753 GNAQP50148 359 aa15.12■□□□□ 0.01
ATPAF2-207ENST00000488753 ZNF654Q8IZM8 581 aa15.12■□□□□ 0.01
ATPAF2-207ENST00000488753 SLC4A7Q9Y6M7 1214 aa15.12■□□□□ 0.01
ATPAF2-207ENST00000488753 FRMPD4Q14CM0 1322 aa15.12■□□□□ 0.01
ATPAF2-207ENST00000488753 PRC1O43663 620 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 PPFIA4O75335 1185 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 PARNO95453 639 aaKnown RBP15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 CALM1P0DP23 149 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 CALM2P0DP24 149 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 CALM3P0DP25 149 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 MYCLP12524 364 aaPredicted RBP15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 ACTN1P12814 892 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 LIFRP42702 1097 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 RBL2Q08999 1139 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 PTGISQ16647 500 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 GNPTABQ3T906 1256 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 BMP2KLQ5H9B9 411 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 CELF3Q5SZQ8 465 aaKnown RBP15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 MYSM1Q5VVJ2 828 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 AFAP1L1Q8TED9 768 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 RRP36Q96EU6 259 aaKnown RBP15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 GTF2IRD1Q9UHL9 959 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 PCDHA11Q9Y5I1 949 aa15.11■□□□□ 0.01
ATPAF2-207ENST00000488753 VCANP13611 3396 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 HAS3O00219 553 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 SH2B2O14492 632 aaPredicted RBP15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 SLC27A2O14975 620 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 CHMP4BP1P59074 171 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 NECTIN1Q15223 517 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 GDF6Q6KF10 455 aaPredicted RBP15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 CENPQQ7L2Z9 268 aaPredicted RBP15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 DEFB128Q7Z7B8 93 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 FCHSD1Q86WN1 690 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 C7orf31Q8N865 590 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 IL31RAQ8NI17 732 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 PHOSPHO2Q8TCD6 241 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 CTAGE1Q96RT6 745 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 SLC28A3Q9HAS3 691 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 SEC63Q9UGP8 760 aaKnown RBP15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 CUL9Q8IWT3 2517 aa15.1■□□□□ 0.01
ATPAF2-207ENST00000488753 CCDC69A6NI79 296 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 ZBBXA8MT70 800 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 PIK3CDO00329 1044 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 GGPS1O95749 300 aa15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 ATP2A2P16615 1042 aaKnown RBP15.09■□□□□ 0.01
ATPAF2-207ENST00000488753 UBA1P22314 1058 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms