RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 PRC1O43663 620 aa16.72■□□□□ 0.27
CLDN11-207ENST00000486975 KPNA6O60684 536 aa16.72■□□□□ 0.27
CLDN11-207ENST00000486975 CFBP00751 764 aa16.72■□□□□ 0.27
CLDN11-207ENST00000486975 TXNP10599 105 aaKnown RBP16.72■□□□□ 0.27
CLDN11-207ENST00000486975 SMARCA1P28370 1054 aa16.72■□□□□ 0.27
CLDN11-207ENST00000486975 STXBP2Q15833 593 aa16.72■□□□□ 0.27
CLDN11-207ENST00000486975 BRDTQ58F21 947 aaPredicted RBP16.72■□□□□ 0.27
CLDN11-207ENST00000486975 CREB3L3Q68CJ9 461 aa16.72■□□□□ 0.27
CLDN11-207ENST00000486975 CASC1Q6TDU7 716 aa16.72■□□□□ 0.27
CLDN11-207ENST00000486975 PIGSQ96S52 555 aa16.72■□□□□ 0.27
CLDN11-207ENST00000486975 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
CLDN11-207ENST00000486975 MYH6P13533 1939 aa16.71■□□□□ 0.27
CLDN11-207ENST00000486975 SH2B2O14492 632 aaPredicted RBP16.71■□□□□ 0.27
CLDN11-207ENST00000486975 KIF5BP33176 963 aa16.71■□□□□ 0.27
CLDN11-207ENST00000486975 LIFRP42702 1097 aa16.71■□□□□ 0.27
CLDN11-207ENST00000486975 EPHB4P54760 987 aa16.71■□□□□ 0.27
CLDN11-207ENST00000486975 ARHGEF16Q5VV41 709 aa16.71■□□□□ 0.27
CLDN11-207ENST00000486975 HOMER1Q86YM7 354 aa16.71■□□□□ 0.27
CLDN11-207ENST00000486975 ZNF654Q8IZM8 581 aa16.71■□□□□ 0.27
CLDN11-207ENST00000486975 DEFB123Q8N688 67 aa16.71■□□□□ 0.27
CLDN11-207ENST00000486975 CTCFLQ8NI51 663 aaPredicted RBP16.71■□□□□ 0.27
CLDN11-207ENST00000486975 LZTS2Q9BRK4 669 aa16.71■□□□□ 0.27
CLDN11-207ENST00000486975 SPZ1Q9BXG8 430 aa16.71■□□□□ 0.27
CLDN11-207ENST00000486975 PXMP2Q9NR77 195 aa16.71■□□□□ 0.27
CLDN11-207ENST00000486975 EIF3JO75822 258 aaKnown RBP16.7■□□□□ 0.26
CLDN11-207ENST00000486975 ARIH2O95376 493 aa16.7■□□□□ 0.26
CLDN11-207ENST00000486975 NR3C2P08235 984 aa16.7■□□□□ 0.26
CLDN11-207ENST00000486975 SMAD3P84022 425 aaKnown RBP16.7■□□□□ 0.26
CLDN11-207ENST00000486975 PPIGQ13427 754 aaKnown RBP eCLIP16.7■□□□□ 0.26
CLDN11-207ENST00000486975 RNF20Q5VTR2 975 aa16.7■□□□□ 0.26
CLDN11-207ENST00000486975 MTG1Q9BT17 334 aaPredicted RBP16.7■□□□□ 0.26
CLDN11-207ENST00000486975 CDC45O75419 566 aa16.69■□□□□ 0.26
CLDN11-207ENST00000486975 CALM1P0DP23 149 aa16.69■□□□□ 0.26
CLDN11-207ENST00000486975 CALM2P0DP24 149 aa16.69■□□□□ 0.26
CLDN11-207ENST00000486975 CALM3P0DP25 149 aa16.69■□□□□ 0.26
CLDN11-207ENST00000486975 EIF2AK2P19525 551 aaKnown RBP16.69■□□□□ 0.26
CLDN11-207ENST00000486975 GNAQP50148 359 aa16.69■□□□□ 0.26
CLDN11-207ENST00000486975 PSMC6P62333 389 aa16.69■□□□□ 0.26
CLDN11-207ENST00000486975 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
CLDN11-207ENST00000486975 TMEM199Q8N511 208 aa16.69■□□□□ 0.26
CLDN11-207ENST00000486975 COPS5Q92905 334 aa16.69■□□□□ 0.26
CLDN11-207ENST00000486975 EMID1Q96A84 441 aaPredicted RBP16.69■□□□□ 0.26
CLDN11-207ENST00000486975 PDCD2LQ9BRP1 358 aa16.69■□□□□ 0.26
CLDN11-207ENST00000486975 ALDH8A1Q9H2A2 487 aaPredicted RBP16.69■□□□□ 0.26
CLDN11-207ENST00000486975 GPHNQ9NQX3 736 aaPredicted RBP16.69■□□□□ 0.26
CLDN11-207ENST00000486975 MTMR10Q9NXD2 777 aa16.69■□□□□ 0.26
CLDN11-207ENST00000486975 SCN10AQ9Y5Y9 1956 aa16.68■□□□□ 0.26
CLDN11-207ENST00000486975 GCOM1H8Y6P7 765 aaPredicted RBP16.68■□□□□ 0.26
CLDN11-207ENST00000486975 B4GALT4O60513 344 aa16.68■□□□□ 0.26
CLDN11-207ENST00000486975 GH1P01241 217 aa16.68■□□□□ 0.26
CLDN11-207ENST00000486975 MYL3P08590 195 aa16.68■□□□□ 0.26
CLDN11-207ENST00000486975 SUPT20HL2P0C7V6 817 aa16.68■□□□□ 0.26
CLDN11-207ENST00000486975 POLR2MP0CAP2 368 aa16.68■□□□□ 0.26
CLDN11-207ENST00000486975 PTPN11Q06124 597 aaPredicted RBP16.68■□□□□ 0.26
CLDN11-207ENST00000486975 ARHGAP1Q07960 439 aa16.68■□□□□ 0.26
CLDN11-207ENST00000486975 COL9A3Q14050 684 aaPredicted RBP16.68■□□□□ 0.26
CLDN11-207ENST00000486975 TSGA10IPQ3SY00 556 aa16.68■□□□□ 0.26
CLDN11-207ENST00000486975 SEPT14Q6ZU15 432 aa16.68■□□□□ 0.26
CLDN11-207ENST00000486975 SGMS1Q86VZ5 419 aa16.68■□□□□ 0.26
CLDN11-207ENST00000486975 RNPC3Q96LT9 517 aaKnown RBP16.68■□□□□ 0.26
CLDN11-207ENST00000486975 HIPK3Q9H422 1215 aa16.68■□□□□ 0.26
CLDN11-207ENST00000486975 DDX41Q9UJV9 622 aaKnown RBP16.68■□□□□ 0.26
CLDN11-207ENST00000486975 CCDC69A6NI79 296 aa16.67■□□□□ 0.26
CLDN11-207ENST00000486975 CSF2RAP15509 400 aa16.67■□□□□ 0.26
CLDN11-207ENST00000486975 PGM5Q15124 567 aa16.67■□□□□ 0.26
CLDN11-207ENST00000486975 RASIP1Q5U651 963 aa16.67■□□□□ 0.26
CLDN11-207ENST00000486975 NFRKBQ6P4R8 1299 aa16.67■□□□□ 0.26
CLDN11-207ENST00000486975 PSRC1Q6PGN9 363 aaPredicted RBP16.67■□□□□ 0.26
CLDN11-207ENST00000486975 KCNV1Q6PIU1 500 aa16.67■□□□□ 0.26
CLDN11-207ENST00000486975 NFXL1Q6ZNB6 911 aa16.67■□□□□ 0.26
CLDN11-207ENST00000486975 Q7L0L9 218 aa16.67■□□□□ 0.26
CLDN11-207ENST00000486975 VSIG10LQ86VR7 867 aa16.67■□□□□ 0.26
CLDN11-207ENST00000486975 RRP36Q96EU6 259 aaKnown RBP16.67■□□□□ 0.26
CLDN11-207ENST00000486975 NOC4LQ9BVI4 516 aaKnown RBP16.67■□□□□ 0.26
CLDN11-207ENST00000486975 TMEM121BQ9BXQ6 578 aaPredicted RBP16.67■□□□□ 0.26
CLDN11-207ENST00000486975 PPP1R12CQ9BZL4 782 aa16.67■□□□□ 0.26
CLDN11-207ENST00000486975 TRPV6Q9H1D0 765 aa16.67■□□□□ 0.26
CLDN11-207ENST00000486975 FRMPD4Q14CM0 1322 aa16.67■□□□□ 0.26
CLDN11-207ENST00000486975 RGS20O76081 388 aa16.66■□□□□ 0.26
CLDN11-207ENST00000486975 MMP3P08254 477 aa16.66■□□□□ 0.26
CLDN11-207ENST00000486975 HOXA13P31271 388 aaPredicted RBP16.66■□□□□ 0.26
CLDN11-207ENST00000486975 LY6KQ17RY6 165 aa16.66■□□□□ 0.26
CLDN11-207ENST00000486975 C16orf59Q7L2K0 433 aa16.66■□□□□ 0.26
CLDN11-207ENST00000486975 AFG1LQ8WV93 481 aa16.66■□□□□ 0.26
CLDN11-207ENST00000486975 CCDC136Q96JN2 1154 aa16.66■□□□□ 0.26
CLDN11-207ENST00000486975 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLDN11-207ENST00000486975 MYL10Q9BUA6 226 aa16.66■□□□□ 0.26
CLDN11-207ENST00000486975 STXBP5LQ9Y2K9 1186 aa16.66■□□□□ 0.26
CLDN11-207ENST00000486975 MRVI1Q9Y6F6 885 aa16.66■□□□□ 0.26
CLDN11-207ENST00000486975 KIAA1217Q5T5P2 1943 aa16.65■□□□□ 0.26
CLDN11-207ENST00000486975 TMEM265A0A087WTH1 108 aa16.65■□□□□ 0.26
CLDN11-207ENST00000486975 TGFB3P10600 412 aa16.65■□□□□ 0.26
CLDN11-207ENST00000486975 CYP2C18P33260 490 aa16.65■□□□□ 0.26
CLDN11-207ENST00000486975 LAMC2Q13753 1193 aa16.65■□□□□ 0.26
CLDN11-207ENST00000486975 NBPF20Q3BBV1 942 aa16.65■□□□□ 0.26
CLDN11-207ENST00000486975 TMEM240Q5SV17 173 aa16.65■□□□□ 0.26
CLDN11-207ENST00000486975 IL23AQ9NPF7 189 aa16.65■□□□□ 0.26
CLDN11-207ENST00000486975 SEC63Q9UGP8 760 aaKnown RBP16.65■□□□□ 0.26
CLDN11-207ENST00000486975 SLC12A7Q9Y666 1083 aa16.65■□□□□ 0.26
CLDN11-207ENST00000486975 BAZ2BQ9UIF8 2168 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms