RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ASLP04424 464 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 KIR2DL1P43626 348 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-211ENST00000484581 KIR2DL2P43627 348 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-211ENST00000484581 MAP4K2Q12851 820 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 AUHQ13825 339 aaKnown RBP6.08□□□□□ -1.44
VPS13A-211ENST00000484581 DHCR24Q15392 516 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 CEP128Q6ZU80 1094 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 STRA8Q7Z7C7 330 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 NLRX1Q86UT6 975 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 ZNF655Q8N720 491 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-211ENST00000484581 SLC7A14Q8TBB6 771 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 BTN2A2Q8WVV5 523 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 TCTN2Q96GX1 697 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 HDAC8Q9BY41 377 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 FOXP3Q9BZS1 431 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 SLC52A2Q9HAB3 445 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 CRTAC1Q9NQ79 661 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 PRR13Q9NZ81 148 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 CGGBP1Q9UFW8 167 aaPredicted RBP6.08□□□□□ -1.44
VPS13A-211ENST00000484581 TCFL5Q9UL49 500 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 ZNF281Q9Y2X9 895 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 IRAK3Q9Y616 596 aa6.08□□□□□ -1.44
VPS13A-211ENST00000484581 PLEKHD1A6NEE1 506 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 PRC1O43663 620 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 NRDCO43847 1150 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 DLX3O60479 287 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 IGFALSP35858 605 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 GFRA1P56159 465 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 GRB10Q13322 594 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 NFE2Q16621 373 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-211ENST00000484581 RNF219Q5W0B1 726 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-211ENST00000484581 PKN3Q6P5Z2 889 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 MAMDC2Q7Z304 686 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-211ENST00000484581 CCAR1Q8IX12 1150 aaKnown RBP6.07□□□□□ -1.44
VPS13A-211ENST00000484581 RAVER1Q8IY67 606 aaKnown RBP6.07□□□□□ -1.44
VPS13A-211ENST00000484581 CCDC146Q8IYE0 955 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 ADCY4Q8NFM4 1077 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 LEO1Q8WVC0 666 aaPredicted RBP6.07□□□□□ -1.44
VPS13A-211ENST00000484581 KCTD13Q8WZ19 329 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 PTPRN2Q92932 1015 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 MAP6Q96JE9 813 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 C20orf173Q96LM9 149 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 ASPSCR1Q9BZE9 553 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 GABBR1Q9UBS5 961 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 PCDHB12Q9Y5F1 795 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 FHOD1Q9Y613 1164 aa6.07□□□□□ -1.44
VPS13A-211ENST00000484581 NOTOA8MTQ0 251 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 HRKO00198 91 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 OPA1O60313 960 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 BRINP1O60477 761 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 RASGRP1O95267 797 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 MAP4K4O95819 1239 aaPredicted RBP6.06□□□□□ -1.44
VPS13A-211ENST00000484581 SYPP08247 313 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 FLT3P36888 993 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 MCL1Q07820 350 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 NBPF9Q3BBW0 867 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 OLFML2BQ68BL8 750 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 GTF2IRD2BQ6EKJ0 949 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 FGD2Q7Z6J4 655 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 GTF2IRD2Q86UP8 949 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 LINC00116Q8NCU8 138 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 SIGLEC10Q96LC7 697 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 CCDC140Q96MF4 163 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 TNPO3Q9Y5L0 923 aaKnown RBP6.06□□□□□ -1.44
VPS13A-211ENST00000484581 PHLDB1Q86UU1 1377 aa6.06□□□□□ -1.44
VPS13A-211ENST00000484581 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.05□□□□□ -1.44
VPS13A-211ENST00000484581 GPR39O43194 453 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 TSPAN6O43657 245 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 FKTNO75072 461 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 KCNH1O95259 989 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 SCG5P05408 212 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 PNLIPP16233 465 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 PI3P19957 117 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 ZNF445P59923 1031 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 STRN3Q13033 797 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 ZNF460Q14592 562 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 SSPNQ14714 243 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 PPP2R5AQ15172 486 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 CCSAPQ6IQ19 270 aaPredicted RBP6.05□□□□□ -1.44
VPS13A-211ENST00000484581 TMC3Q7Z5M5 1100 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 SPATS2Q86XZ4 545 aaKnown RBP6.05□□□□□ -1.44
VPS13A-211ENST00000484581 CERS3Q8IU89 383 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 MARCH10Q8NA82 808 aaPredicted RBP6.05□□□□□ -1.44
VPS13A-211ENST00000484581 WDR66Q8TBY9 1149 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 PSMD1Q99460 953 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 NKX2-4Q9H2Z4 354 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 DIS3Q9Y2L1 958 aaKnown RBP6.05□□□□□ -1.44
VPS13A-211ENST00000484581 RIPOR2Q9Y4F9 1068 aa6.05□□□□□ -1.44
VPS13A-211ENST00000484581 B4E1Z4 1266 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 ABLIM1O14639 778 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 TPD52L2O43399 206 aaKnown RBP6.04□□□□□ -1.44
VPS13A-211ENST00000484581 KPNA6O60684 536 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 KATNA1O75449 491 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 SASH1O94885 1247 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 CPP00450 1065 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 HOXC12P31275 282 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 NEK2P51955 445 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 NEK4P51957 841 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 RTP1P59025 263 aa6.04□□□□□ -1.44
VPS13A-211ENST00000484581 STAT4Q14765 748 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms