RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	PCDHA4	Q9UN74	947 aa		5.83	□□□□□ -1.48
HDAC6-223	ENST00000480525	PHF24	Q9UPV7	400 aa		5.83	□□□□□ -1.48
HDAC6-223	ENST00000480525	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	5.83	□□□□□ -1.48
HDAC6-223	ENST00000480525	MORC2	Q9Y6X9	1032 aa	Predicted RBP	5.83	□□□□□ -1.48
HDAC6-223	ENST00000480525	MYH15	Q9Y2K3	1946 aa		5.83	□□□□□ -1.48
HDAC6-223	ENST00000480525	MROH7	Q68CQ1	1323 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	SMCO2	A6NFE2	343 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	SPATA31C2	B4DYI2	1134 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	MEIS1	O00470	390 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	ZEB2	O60315	1214 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	PEX10	O60683	326 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	CTDNEP1	O95476	244 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	CFB	P00751	764 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	RXRA	P19793	462 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	PDC	P20941	246 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	CYP2C19	P33261	490 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	CPT1A	P50416	773 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	SLC26A2	P50443	739 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	CNTN2	Q02246	1040 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	PDE4D	Q08499	809 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	LAMC2	Q13753	1193 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	NEDD9	Q14511	834 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	CCL14	Q16627	93 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	CCDC144B	Q3MJ40	725 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	CEP55	Q53EZ4	464 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	IFFO2	Q5TF58	517 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	ARHGEF16	Q5VV41	709 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	PPP4R3A	Q6IN85	833 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	KRT25	Q7Z3Z0	450 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	HEATR3	Q7Z4Q2	680 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	NLRX1	Q86UT6	975 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	KCTD17	Q8N5Z5	321 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	TRPV1	Q8NER1	839 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	FBXO18	Q8NFZ0	1043 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	PPTC7	Q8NI37	304 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	SH3TC2	Q8TF17	1288 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	SHISA4	Q96DD7	197 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	UNC93B1	Q9H1C4	597 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	FOXP1	Q9H334	677 aa	Predicted RBP	5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	CPVL	Q9H3G5	476 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	VAT1L	Q9HCJ6	419 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	BRMS1	Q9HCU9	246 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	POLR3E	Q9NVU0	708 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	COL20A1	Q9P218	1284 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	UBIAD1	Q9Y5Z9	338 aa		5.82	□□□□□ -1.48
HDAC6-223	ENST00000480525	LAD1	O00515	517 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	PPFIA4	O75335	1185 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	RGS20	O76081	388 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	GH1	P01241	217 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	MMP1	P03956	469 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	FDPS	P14324	419 aa	Known RBP	5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	U2AF2	P26368	475 aa	Known RBP eCLIP	5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	HOXC8	P31273	242 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	MNX1	P50219	401 aa	Predicted RBP	5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	MRPS9	P82933	396 aa	Known RBP	5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	TNFAIP2	Q03169	654 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	RBL2	Q08999	1139 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	ST3GAL1	Q11201	340 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	MTFR1	Q15390	333 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525		Q4G0T1	1027 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	METTL7B	Q6UX53	244 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	NECAB2	Q7Z6G3	386 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	BLID	Q8IZY5	108 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	ZNF710	Q8N1W2	664 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	SLC43A3	Q8NBI5	491 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	RDM1	Q8NG50	284 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	TNPO1	Q92973	898 aa	Known RBP	5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	TNFRSF25	Q93038	417 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	PHKB	Q93100	1093 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	TMX3	Q96JJ7	454 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	DEFB118	Q96PH6	123 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	TAAR1	Q96RJ0	339 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	RIT2	Q99578	217 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	HTATIP2	Q9BUP3	242 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	SLC26A6	Q9BXS9	759 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	ANO3	Q9BYT9	981 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	NCOA5	Q9HCD5	579 aa	Known RBP	5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	JADE2	Q9NQC1	790 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	XPNPEP3	Q9NQH7	507 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	TBC1D22B	Q9NU19	505 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	ORC3	Q9UBD5	711 aa	Predicted RBP	5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	BIN2	Q9UBW5	565 aa	Predicted RBP	5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	DDX41	Q9UJV9	622 aa	Known RBP	5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	PCDHA6	Q9UN73	950 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	MTMR7	Q9Y216	660 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	PCDHA8	Q9Y5H6	950 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	DNAH12	Q6ZR08	3092 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	TANC1	Q9C0D5	1861 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	DOCK5	Q9H7D0	1870 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	LTBP2	Q14767	1821 aa		5.81	□□□□□ -1.48
HDAC6-223	ENST00000480525	EMSY	Q7Z589	1322 aa		5.8	□□□□□ -1.48
HDAC6-223	ENST00000480525	SYNRG	Q9UMZ2	1314 aa		5.8	□□□□□ -1.48
HDAC6-223	ENST00000480525	IGLV3-22	A0A075B6J6	115 aa		5.8	□□□□□ -1.48
HDAC6-223	ENST00000480525	KBTBD13	C9JR72	458 aa		5.8	□□□□□ -1.48
HDAC6-223	ENST00000480525		K7ELQ4	463 aa	Predicted RBP	5.8	□□□□□ -1.48
HDAC6-223	ENST00000480525	CTAGE5	O15320	804 aa		5.8	□□□□□ -1.48
HDAC6-223	ENST00000480525	SLC26A4	O43511	780 aa		5.8	□□□□□ -1.48
HDAC6-223	ENST00000480525	CAND2	O75155	1236 aa		5.8	□□□□□ -1.48
HDAC6-223	ENST00000480525	FARP2	O94887	1054 aa	Predicted RBP	5.8	□□□□□ -1.48
HDAC6-223	ENST00000480525	PARN	O95453	639 aa	Known RBP	5.8	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms