RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 REXO1Q8N1G1 1221 aaKnown RBP12.4□□□□□ -0.42
ATG4B-219ENST00000479941 WDR11Q9BZH6 1224 aa12.4□□□□□ -0.42
ATG4B-219ENST00000479941 SPC25Q9HBM1 224 aa12.4□□□□□ -0.42
ATG4B-219ENST00000479941 GNEQ9Y223 722 aaKnown RBP12.4□□□□□ -0.42
ATG4B-219ENST00000479941 Q9Y3F1 56 aa12.4□□□□□ -0.42
ATG4B-219ENST00000479941 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-219ENST00000479941 DNM1LO00429 736 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 JAK2O60674 1132 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 ADAMTS4O75173 837 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 FARP2O94887 1054 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-219ENST00000479941 CD2BP2O95400 341 aaKnown RBP12.39□□□□□ -0.43
ATG4B-219ENST00000479941 TXNP10599 105 aaKnown RBP12.39□□□□□ -0.43
ATG4B-219ENST00000479941 SMPD1P17405 629 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 GJA9P57773 515 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 MRPS9P82933 396 aaKnown RBP12.39□□□□□ -0.43
ATG4B-219ENST00000479941 HMGN5P82970 282 aaKnown RBP12.39□□□□□ -0.43
ATG4B-219ENST00000479941 GNPTABQ3T906 1256 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 SEPT14Q6ZU15 432 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 IL31RAQ8NI17 732 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 TMX3Q96JJ7 454 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 AIFM3Q96NN9 605 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 ALG1Q9BT22 464 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 ANO3Q9BYT9 981 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 PCDHA4Q9UN74 947 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 LRRC37A2A6NM11 1700 aa12.39□□□□□ -0.43
ATG4B-219ENST00000479941 SYNRGQ9UMZ2 1314 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 DNAH12Q6ZR08 3092 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 KBTBD13C9JR72 458 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 ADCY6O43306 1168 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 RGS20O76081 388 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 PGK1P00558 417 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 TGFB3P10600 412 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 MNX1P50219 401 aaPredicted RBP12.38□□□□□ -0.43
ATG4B-219ENST00000479941 LRRC41Q15345 812 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 JAKMIP3Q5VZ66 844 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 CCDC62Q6P9F0 684 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 NECAB2Q7Z6G3 386 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 UBE2Q1Q7Z7E8 422 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 DAGLBQ8NCG7 672 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 LENG1Q96BZ8 264 aaPredicted RBP12.38□□□□□ -0.43
ATG4B-219ENST00000479941 INPP4AQ96PE3 977 aaPredicted RBP12.38□□□□□ -0.43
ATG4B-219ENST00000479941 PHF20Q9BVI0 1012 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 AP5M1Q9H0R1 490 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 UPF3AQ9H1J1 476 aaKnown RBP12.38□□□□□ -0.43
ATG4B-219ENST00000479941 TMEM260Q9NX78 707 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 MRVI1Q9Y6F6 885 aa12.38□□□□□ -0.43
ATG4B-219ENST00000479941 MAFGO15525 162 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 DYNC1LI2O43237 492 aaPredicted RBP12.37□□□□□ -0.43
ATG4B-219ENST00000479941 ARIH2O95376 493 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 C6orf222P0C671 652 aaPredicted RBP12.37□□□□□ -0.43
ATG4B-219ENST00000479941 CST5P28325 142 aaPredicted RBP12.37□□□□□ -0.43
ATG4B-219ENST00000479941 ICAM3P32942 547 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 SREBF1P36956 1147 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 NKX3-2P78367 333 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 GJC2Q5T442 439 aaPredicted RBP12.37□□□□□ -0.43
ATG4B-219ENST00000479941 TLK2Q86UE8 772 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 NLRX1Q86UT6 975 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 BLIDQ8IZY5 108 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 PCSK9Q8NBP7 692 aaKnown RBP12.37□□□□□ -0.43
ATG4B-219ENST00000479941 KLHDC9Q8NEP7 349 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 PAWRQ96IZ0 340 aaKnown RBP12.37□□□□□ -0.43
ATG4B-219ENST00000479941 CDHR1Q96JP9 859 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 PGBD1Q96JS3 809 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 TSEN34Q9BSV6 310 aaKnown RBP12.37□□□□□ -0.43
ATG4B-219ENST00000479941 C11orf49Q9H6J7 331 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 RTEL1Q9NZ71 1219 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 DDX41Q9UJV9 622 aaKnown RBP12.37□□□□□ -0.43
ATG4B-219ENST00000479941 KCNJ14Q9UNX9 436 aa12.37□□□□□ -0.43
ATG4B-219ENST00000479941 MOXD2PA6NHM9 499 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 M0R2N6 131 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 FIBPO43427 364 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 DTNBO60941 627 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 MYCNP04198 464 aaPredicted RBP12.36□□□□□ -0.43
ATG4B-219ENST00000479941 COL6A1P12109 1028 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 ARHGAP4P98171 946 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 TRIM29Q14134 588 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 NPY5RQ15761 445 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 LY6KQ17RY6 165 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 BRDTQ58F21 947 aaPredicted RBP12.36□□□□□ -0.43
ATG4B-219ENST00000479941 GNASQ5JWF2 1037 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 TMEM63BQ5T3F8 832 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 FAM184AQ8NB25 1140 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 DIS3LQ8TF46 1054 aaKnown RBP12.36□□□□□ -0.43
ATG4B-219ENST00000479941 GPRASP2Q96D09 838 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
ATG4B-219ENST00000479941 BRMS1Q9HCU9 246 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 KIF3AQ9Y496 699 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 UBIAD1Q9Y5Z9 338 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 FRMPD3Q5JV73 1810 aa12.36□□□□□ -0.43
ATG4B-219ENST00000479941 KIAA1217Q5T5P2 1943 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 SPATA31C2B4DYI2 1134 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 ADAMTS3O15072 1205 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 ZEB2O60315 1214 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 GH1P01241 217 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 CYP3A4P08684 503 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 ITGB5P18084 799 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 CPT1AP50416 773 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 LAMC2Q13753 1193 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 NEDD9Q14511 834 aa12.35□□□□□ -0.43
ATG4B-219ENST00000479941 FSCN1Q16658 493 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms