RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ARHGEF15O94989 841 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 GH1P01241 217 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 NR3C2P08235 984 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 CYP21A2P08686 494 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 IQCF3P0C7M6 154 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 ZNF286BP0CG31 522 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 CHMLP26374 656 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 MRPL12P52815 198 aaKnown RBP13.58□□□□□ -0.24
VARS2-208ENST00000477052 PTGISQ16647 500 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 PPP2R2DQ66LE6 453 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 NFRKBQ6P4R8 1299 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 STOX1Q6ZVD7 989 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 SPRED2Q7Z698 418 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 TMCO2Q7Z6W1 182 aaPredicted RBP13.58□□□□□ -0.24
VARS2-208ENST00000477052 MCF2L2Q86YR7 1114 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 MICALL1Q8N3F8 863 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 GPKOWQ92917 476 aaPredicted RBP eCLIP13.58□□□□□ -0.24
VARS2-208ENST00000477052 PIGSQ96S52 555 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 ALG1Q9BT22 464 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 AMNQ9BXJ7 453 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 SEZ6LQ9BYH1 1024 aa13.58□□□□□ -0.24
VARS2-208ENST00000477052 DDX41Q9UJV9 622 aaKnown RBP13.58□□□□□ -0.24
VARS2-208ENST00000477052 BAZ2BQ9UIF8 2168 aaKnown RBP13.57□□□□□ -0.24
VARS2-208ENST00000477052 PALM3A6NDB9 673 aaPredicted RBP13.57□□□□□ -0.24
VARS2-208ENST00000477052 IFIT3O14879 490 aaKnown RBP13.57□□□□□ -0.24
VARS2-208ENST00000477052 KPNA6O60684 536 aa13.57□□□□□ -0.24
VARS2-208ENST00000477052 RGS20O76081 388 aa13.57□□□□□ -0.24
VARS2-208ENST00000477052 ZNF200P98182 395 aaPredicted RBP13.57□□□□□ -0.24
VARS2-208ENST00000477052 TCTN1Q2MV58 587 aa13.57□□□□□ -0.24
VARS2-208ENST00000477052 RETREG2Q8NC44 543 aa13.57□□□□□ -0.24
VARS2-208ENST00000477052 DHX38Q92620 1227 aaKnown RBP13.57□□□□□ -0.24
VARS2-208ENST00000477052 BCAS3Q9H6U6 928 aa13.57□□□□□ -0.24
VARS2-208ENST00000477052 PCDHA1Q9Y5I3 950 aa13.57□□□□□ -0.24
VARS2-208ENST00000477052 MRVI1Q9Y6F6 885 aa13.57□□□□□ -0.24
VARS2-208ENST00000477052 TET1Q8NFU7 2136 aa13.57□□□□□ -0.24
VARS2-208ENST00000477052 KIAA1217Q5T5P2 1943 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 TRIP12Q14669 1992 aaPredicted RBP13.56□□□□□ -0.24
VARS2-208ENST00000477052 EPOPA6NHQ4 379 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 CYTH3O43739 400 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 CA3P07451 260 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 HSD17B4P51659 736 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 COL9A3Q14050 684 aaPredicted RBP13.56□□□□□ -0.24
VARS2-208ENST00000477052 GPNMBQ14956 572 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 KRT40Q6A162 431 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 FCHSD1Q86WN1 690 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 WNT8BQ93098 351 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 MTMR8Q96EF0 704 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 IWS1Q96ST2 819 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 HDAC6Q9UBN7 1215 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 PCDHA11Q9Y5I1 949 aa13.56□□□□□ -0.24
VARS2-208ENST00000477052 MYH7BA7E2Y1 1941 aa13.55□□□□□ -0.24
VARS2-208ENST00000477052 E7EWF7 191 aa13.55□□□□□ -0.24
VARS2-208ENST00000477052 ZBTB5O15062 677 aa13.55□□□□□ -0.24
VARS2-208ENST00000477052 EIF3JO75822 258 aaKnown RBP13.55□□□□□ -0.24
VARS2-208ENST00000477052 CASTP20810 708 aaKnown RBP13.55□□□□□ -0.24
VARS2-208ENST00000477052 PSEN2P49810 448 aa13.55□□□□□ -0.24
VARS2-208ENST00000477052 ANTXR2P58335 489 aa13.55□□□□□ -0.24
VARS2-208ENST00000477052 SP2Q02086 613 aa13.55□□□□□ -0.24
VARS2-208ENST00000477052 TRDNQ13061 729 aa13.55□□□□□ -0.24
VARS2-208ENST00000477052 HIC1Q14526 733 aa13.55□□□□□ -0.24
VARS2-208ENST00000477052 GRM4Q14833 912 aa13.55□□□□□ -0.24
VARS2-208ENST00000477052 DHX37Q8IY37 1157 aaKnown RBP13.55□□□□□ -0.24
VARS2-208ENST00000477052 PDCD2LQ9BRP1 358 aa13.55□□□□□ -0.24
VARS2-208ENST00000477052 MYL10Q9BUA6 226 aa13.55□□□□□ -0.24
VARS2-208ENST00000477052 REV3LO60673 3130 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 PTPN11Q06124 597 aaPredicted RBP13.54□□□□□ -0.24
VARS2-208ENST00000477052 BFSP2Q13515 415 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 MFSD10Q14728 455 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 WTAPQ15007 396 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 PGM5Q15124 567 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 DGKDQ16760 1214 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 HSDL1Q3SXM5 330 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 TMEM67Q5HYA8 995 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 SKAP1Q86WV1 359 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 C7orf31Q8N865 590 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 TELO2Q9Y4R8 837 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
VARS2-208ENST00000477052 TANC1Q9C0D5 1861 aa13.54□□□□□ -0.24
VARS2-208ENST00000477052 TTC28Q96AY4 2481 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 LCHNA4D1U4 455 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 SGSM2O43147 1006 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 GGPS1O95749 300 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 PFKMP08237 780 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 ACTN1P12814 892 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 NT5C2P49902 561 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 TROAPQ12815 778 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 KIAA0753Q2KHM9 967 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 TJAP1Q5JTD0 557 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
VARS2-208ENST00000477052 VSIG10LQ86VR7 867 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 RAB11FIP4Q86YS3 637 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 HERC6Q8IVU3 1022 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 PPTC7Q8NI37 304 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 RUFY2Q8WXA3 655 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 ARNTL2Q8WYA1 636 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 SPATA33Q96N06 139 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 RIOX1Q9H6W3 641 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 GTF2IRD1Q9UHL9 959 aa13.53□□□□□ -0.24
VARS2-208ENST00000477052 PTPRSQ13332 1948 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms