RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 ATP13A4Q4VNC1 1196 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 POMZP3Q6PJE2 187 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 ADAT2Q7Z6V5 191 aaKnown RBP8.31□□□□□ -1.08
LRCH3-215ENST00000476664 C11orf74Q86VG3 221 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 PPFIBP1Q86W92 1011 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 CACTIN-AS1Q8N1I8 211 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 PPHLN1Q8NEY8 458 aaKnown RBP8.31□□□□□ -1.08
LRCH3-215ENST00000476664 ATXN2LQ8WWM7 1075 aaKnown RBP8.31□□□□□ -1.08
LRCH3-215ENST00000476664 HSPBAP1Q96EW2 488 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 AHCYL2Q96HN2 611 aaKnown RBP8.31□□□□□ -1.08
LRCH3-215ENST00000476664 ABHD8Q96I13 439 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 MYD88Q99836 296 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 KLHL25Q9H0H3 589 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 NMRK2Q9NPI5 230 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 ANLNQ9NQW6 1124 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 KRT82Q9NSB4 513 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 FAM86C1Q9NVL1 165 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 MARK1Q9P0L2 795 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 KLF15Q9UIH9 416 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 FBXO2Q9UK22 296 aaPredicted RBP8.31□□□□□ -1.08
LRCH3-215ENST00000476664 IPPQ9Y573 584 aa8.31□□□□□ -1.08
LRCH3-215ENST00000476664 CCDC144AA2RUR9 1427 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 TNS3Q68CZ2 1445 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 DCDC2BA2VCK2 349 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 CHURC1-FNTBB4DL54 471 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 PIP5K1CO60331 668 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 GAS7O60861 476 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 PPM1BO75688 479 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 FKBP9O95302 570 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 SLC19A1P41440 591 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 ERVK-21P61565 698 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 IKBKEQ14164 716 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 FKBP9P1Q75LS8 142 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 KRT28Q7Z3Y7 464 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 SRLQ86TD4 932 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 DRC7Q8IY82 874 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 MICALL1Q8N3F8 863 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 C1orf131Q8NDD1 294 aaKnown RBP8.3□□□□□ -1.08
LRCH3-215ENST00000476664 KCTD13Q8WZ19 329 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 LRGUKQ96M69 825 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 NEUROD6Q96NK8 337 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 ADAM19Q9H013 955 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 APEX2Q9UBZ4 518 aa8.3□□□□□ -1.08
LRCH3-215ENST00000476664 ERBINQ96RT1 1412 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 COL24A1Q17RW2 1714 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 ABHD14A-ACY1A0A1B0GW23 586 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 FZD9O00144 591 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 IL33O95760 270 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 BMP2P12643 396 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 EIF2AK2P19525 551 aaKnown RBP8.29□□□□□ -1.08
LRCH3-215ENST00000476664 POLR2BP30876 1174 aaKnown RBP8.29□□□□□ -1.08
LRCH3-215ENST00000476664 ADCYAP1R1P41586 468 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 LSSP48449 732 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 GEMIN4P57678 1058 aaKnown RBP8.29□□□□□ -1.08
LRCH3-215ENST00000476664 CABP4P57796 275 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 TNP2Q05952 138 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 PUM3Q15397 648 aaKnown RBP8.29□□□□□ -1.08
LRCH3-215ENST00000476664 TDRD10Q5VZ19 366 aaKnown RBP8.29□□□□□ -1.08
LRCH3-215ENST00000476664 CYFIP1Q7L576 1253 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 CATIPQ7Z7H3 387 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 CMTR2Q8IYT2 770 aaKnown RBP8.29□□□□□ -1.08
LRCH3-215ENST00000476664 PHACTR4Q8IZ21 702 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 SMC1BQ8NDV3 1235 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 FGD4Q96M96 766 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 GPR101Q96P66 508 aaPredicted RBP8.29□□□□□ -1.08
LRCH3-215ENST00000476664 GAS2L1Q99501 681 aaPredicted RBP8.29□□□□□ -1.08
LRCH3-215ENST00000476664 CSRNP2Q9H175 543 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 C9orf78Q9NZ63 289 aaPredicted RBP8.29□□□□□ -1.08
LRCH3-215ENST00000476664 SAMD15Q9P1V8 674 aa8.29□□□□□ -1.08
LRCH3-215ENST00000476664 DDX20Q9UHI6 824 aaKnown RBP8.29□□□□□ -1.08
LRCH3-215ENST00000476664 TTC24A2A3L6 582 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-215ENST00000476664 AQP7O14520 342 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 DLX3O60479 287 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 MAPTP10636 758 aaKnown RBP8.28□□□□□ -1.08
LRCH3-215ENST00000476664 RBP3P10745 1247 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 COPB2P35606 906 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 MAP4K2Q12851 820 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 PCBP2Q15366 365 aaKnown RBP eCLIP8.28□□□□□ -1.08
LRCH3-215ENST00000476664 HFE2Q6ZVN8 426 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 PTF1AQ7RTS3 328 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 MYLK4Q86YV6 388 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-215ENST00000476664 TMEM192Q8IY95 271 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 SLFN12Q8IYM2 578 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 CCDC89Q8N998 374 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 FAM13CQ8NE31 585 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 C1orf162Q8NEQ5 155 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-215ENST00000476664 PARD3BQ8TEW8 1205 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 SKA1Q96BD8 255 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 FAXDC2Q96IV6 333 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 MPP4Q96JB8 637 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 CCDC140Q96MF4 163 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 ZKSCAN5Q9Y2L8 839 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 PEAK1Q9H792 1746 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 TULP4Q9NRJ4 1543 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 TECPR2O15040 1411 aa8.28□□□□□ -1.08
LRCH3-215ENST00000476664 TOPAZ1Q8N9V7 1692 aa8.27□□□□□ -1.08
LRCH3-215ENST00000476664 CDC42BPGQ6DT37 1551 aa8.27□□□□□ -1.09
LRCH3-215ENST00000476664 F5H423 210 aaPredicted RBP8.27□□□□□ -1.09
LRCH3-215ENST00000476664 H3BRJ5 948 aa8.27□□□□□ -1.09
LRCH3-215ENST00000476664 J3QL48 77 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms