RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 NLGN2Q8NFZ4 835 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 PLEKHO2Q8TD55 490 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 FBXW5Q969U6 566 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 CRTAC1Q9NQ79 661 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 CLDND1Q9NY35 253 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 SLAMF8Q9P0V8 285 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 WASHC2CQ9Y4E1 1318 aa8.27□□□□□ -1.09
VPS50-212ENST00000476413 A0A1W2PQ45 241 aaPredicted RBP8.26□□□□□ -1.09
VPS50-212ENST00000476413 A0A1W2PQY0 241 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 WTIPA6NIX2 430 aaPredicted RBP8.26□□□□□ -1.09
VPS50-212ENST00000476413 ALG1L2C9J202 215 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 H7BY64 318 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 SPINK2P20155 84 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 ADCYAP1R1P41586 468 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 ZP2Q05996 745 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 HSF5Q4G112 596 aaPredicted RBP8.26□□□□□ -1.09
VPS50-212ENST00000476413 HABP4Q5JVS0 413 aaKnown RBP8.26□□□□□ -1.09
VPS50-212ENST00000476413 ANGEL2Q5VTE6 544 aaKnown RBP8.26□□□□□ -1.09
VPS50-212ENST00000476413 CREB3L3Q68CJ9 461 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 WWC2Q6AWC2 1192 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 DTX1Q86Y01 620 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 CHST14Q8NCH0 376 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 SMC1BQ8NDV3 1235 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 OR2W6PQ8NHA6 318 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 WDR66Q8TBY9 1149 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 PI4K2BQ8TCG2 481 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 ALPK1Q96QP1 1244 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 JAM3Q9BX67 310 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 METTL14Q9HCE5 456 aaKnown RBP8.26□□□□□ -1.09
VPS50-212ENST00000476413 B4GALT6Q9UBX8 382 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 CCDC39Q9UFE4 941 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 ADGRE2Q9UHX3 823 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 SLC5A6Q9Y289 635 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 X6R8D5 127 aa8.26□□□□□ -1.09
VPS50-212ENST00000476413 BRINP1O60477 761 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 COBLO75128 1261 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 GRIK1P39086 918 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 CD97P48960 835 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 DNM2P50570 870 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 LACTBP83111 547 aaPredicted RBP8.25□□□□□ -1.09
VPS50-212ENST00000476413 EXOSC10Q01780 885 aaKnown RBP8.25□□□□□ -1.09
VPS50-212ENST00000476413 DUSP4Q13115 394 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 FAM47CQ5HY64 1035 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 CEP68Q76N32 757 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 OTOP1Q7RTM1 612 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 TEX2Q8IWB9 1127 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 CISD2Q8N5K1 135 aaKnown RBP8.25□□□□□ -1.09
VPS50-212ENST00000476413 CHAMP1Q96JM3 812 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 IFT22Q9H7X7 185 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 SP110Q9HB58 689 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 BTG4Q9NY30 223 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 MARCH2Q9P0N8 246 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 TMEM59LQ9UK28 342 aa8.25□□□□□ -1.09
VPS50-212ENST00000476413 TCRBV5S4A2TA0A5A2 114 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 ZNF561-AS1K7EIQ3 104 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 MSL3P1P0C860 447 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 CPEP16870 476 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 SCNN1BP51168 640 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 GUCY2FP51841 1108 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 CORO7P57737 925 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 RTP1P59025 263 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 KIR3DS1Q14943 382 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 RNF219Q5W0B1 726 aaPredicted RBP8.24□□□□□ -1.09
VPS50-212ENST00000476413 NECAB2Q7Z6G3 386 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 ASIC4Q96FT7 647 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 TMEM169Q96HH4 297 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 TTC1Q99614 292 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 KCNJ15Q99712 375 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 TRIM8Q9BZR9 551 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.24□□□□□ -1.09
VPS50-212ENST00000476413 SMURF1Q9HCE7 757 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 PRDM7Q9NQW5 492 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 C19orf73Q9NVV2 129 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 THRAP3Q9Y2W1 955 aaKnown RBP8.24□□□□□ -1.09
VPS50-212ENST00000476413 RWDD3Q9Y3V2 267 aa8.24□□□□□ -1.09
VPS50-212ENST00000476413 KIAA1324LA8MWY0 1029 aaPredicted RBP8.23□□□□□ -1.09
VPS50-212ENST00000476413 ZEB2O60315 1214 aa8.23□□□□□ -1.09
VPS50-212ENST00000476413 AMY2AP04746 511 aa8.23□□□□□ -1.09
VPS50-212ENST00000476413 APPP05067 770 aa8.23□□□□□ -1.09
VPS50-212ENST00000476413 PDE6AP16499 860 aa8.23□□□□□ -1.09
VPS50-212ENST00000476413 ATP2A2P16615 1042 aaKnown RBP8.23□□□□□ -1.09
VPS50-212ENST00000476413 AMY2BP19961 511 aa8.23□□□□□ -1.09
VPS50-212ENST00000476413 FSTL4Q6MZW2 842 aa8.23□□□□□ -1.09
VPS50-212ENST00000476413 CEP128Q6ZU80 1094 aa8.23□□□□□ -1.09
VPS50-212ENST00000476413 ANKS4BQ8N8V4 417 aa8.23□□□□□ -1.09
VPS50-212ENST00000476413 USP7Q93009 1102 aa8.23□□□□□ -1.09
VPS50-212ENST00000476413 PLCD4Q9BRC7 762 aa8.23□□□□□ -1.09
VPS50-212ENST00000476413 PAK6Q9NQU5 681 aaPredicted RBP8.23□□□□□ -1.09
VPS50-212ENST00000476413 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.23□□□□□ -1.09
VPS50-212ENST00000476413 IMPACTQ9P2X3 320 aa8.23□□□□□ -1.09
VPS50-212ENST00000476413 C22orf46C9J442 243 aa8.22□□□□□ -1.09
VPS50-212ENST00000476413 KATNA1O75449 491 aa8.22□□□□□ -1.09
VPS50-212ENST00000476413 PARNO95453 639 aaKnown RBP8.22□□□□□ -1.09
VPS50-212ENST00000476413 FUCA1P04066 466 aa8.22□□□□□ -1.09
VPS50-212ENST00000476413 S100BP04271 92 aaPredicted RBP8.22□□□□□ -1.09
VPS50-212ENST00000476413 FUT4P22083 530 aa8.22□□□□□ -1.09
VPS50-212ENST00000476413 JAM2P57087 298 aa8.22□□□□□ -1.09
VPS50-212ENST00000476413 ST5P78524 1137 aa8.22□□□□□ -1.09
VPS50-212ENST00000476413 MVKQ03426 396 aa8.22□□□□□ -1.09
VPS50-212ENST00000476413 MTMR1Q13613 665 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms