RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 DESP17661 470 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 GIPRP48546 466 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 DGKGP49619 791 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 AMPD3Q01432 767 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 IFRD2Q12894 506 aaPredicted RBP6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 SNX1Q13596 522 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 CCINQ13939 588 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 SPRED3Q2MJR0 410 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 PLEKHG6Q3KR16 790 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 Q4G0T1 1027 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 SAMD5Q5TGI4 173 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 FBXW10Q5XX13 1052 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 SLCO4C1Q6ZQN7 724 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 LMNTD2Q8IXW0 634 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 CEP112Q8N8E3 955 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 C1orf131Q8NDD1 294 aaKnown RBP6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 ZKSCAN4Q969J2 545 aaPredicted RBP6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 FERD3LQ96RJ6 166 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 LRRCC1Q9C099 1032 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 TTC12Q9H892 705 aaPredicted RBP6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 ZFYVE1Q9HBF4 777 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 SEC31BQ9NQW1 1179 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 ACTR10Q9NZ32 417 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 ADAM21Q9UKJ8 722 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 MAPK8IP1Q9UQF2 711 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 MRFAP1Q9Y605 127 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 GMEB1Q9Y692 573 aa6.71□□□□□ -1.33
ECHDC1-215ENST00000475319 MYO5CQ9NQX4 1742 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 TROQ12816 1431 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 FER1L4A9Z1Z3 1794 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 FRMPD1Q5SYB0 1578 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 SPDYE3A6NKU9 549 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 TRIM64CA6NLI5 447 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 TMEM232C9JQI7 657 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 APBA3O96018 575 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 ITPKAP23677 461 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 SH3BGRP55822 239 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 KCNQ4P56696 695 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 SEPT6Q14141 434 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 SMC1AQ14683 1233 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 CNGA3Q16281 694 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 FXNQ16595 210 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 ARMC3Q5W041 872 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 PACS1Q6VY07 963 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 KIAA0907Q7Z7F0 614 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 PPP1R14BQ96C90 147 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 RBM41Q96IZ5 413 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 HHIPQ96QV1 700 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 LRRC3Q9BY71 257 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 BRD8Q9H0E9 1235 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 RABEP2Q9H5N1 569 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 TMEM165Q9HC07 324 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 LMBRD1Q9NUN5 540 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 PCDHB5Q9Y5E4 795 aa6.71□□□□□ -1.34
ECHDC1-215ENST00000475319 CCDC18Q5T9S5 1454 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 CCDC7Q96M83 1385 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 ROBO2Q9HCK4 1378 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 ERICH2A1L162 156 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 TMEM110-MUSTN1A8MSY1 372 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 KDM1AO60341 852 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 BBOX1O75936 387 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 H2AFB1P0C5Y9 115 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 H2AFB2P0C5Z0 115 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 IDO1P14902 403 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 MCM3P25205 808 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 USP11P51784 963 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 HDAC4P56524 1084 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 RPS26P62854 115 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 FAAP100Q0VG06 881 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 DYNC1I2Q13409 638 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 SQSTM1Q13501 440 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 RASGRF1Q13972 1273 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 ELF2Q15723 593 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 ARSHQ5FYA8 562 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 NUGGCQ68CJ6 796 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 MTHFD1LQ6UB35 978 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 OLFML1Q6UWY5 402 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 ARHGEF25Q86VW2 580 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 NLRP8Q86W28 1048 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 SKAP1Q86WV1 359 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 RTF1Q92541 710 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 KAT2BQ92831 832 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 CUL5Q93034 780 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 SPDL1Q96EA4 605 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 IFT122Q9HBG6 1241 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 TMEM260Q9NX78 707 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 DDX56Q9NY93 547 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 C6orf203Q9P0P8 240 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 HDAC6Q9UBN7 1215 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 ZNF215Q9UL58 517 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 G3BP2Q9UN86 482 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 LEMD3Q9Y2U8 911 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 RNF114Q9Y508 228 aa6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.7□□□□□ -1.34
ECHDC1-215ENST00000475319 TTC37Q6PGP7 1564 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 CCNB3Q8WWL7 1395 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 ADCY5O95622 1261 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 NFKB1P19838 968 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 SMARCA1P28370 1054 aa6.69□□□□□ -1.34
ECHDC1-215ENST00000475319 SLC8A1P32418 973 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms