RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 FAM47CQ5HY64 1035 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 PSRC1Q6PGN9 363 aaPredicted RBP10.45□□□□□ -0.74
USF1-204ENST00000472217 NFXL1Q6ZNB6 911 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 ZNF365Q70YC5 407 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 AFG1LQ8WV93 481 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 SPZ1Q9BXG8 430 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 WNT8AQ9H1J5 351 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 TRMT13Q9NUP7 481 aaKnown RBP10.45□□□□□ -0.74
USF1-204ENST00000472217 DDX41Q9UJV9 622 aaKnown RBP10.45□□□□□ -0.74
USF1-204ENST00000472217 STXBP5LQ9Y2K9 1186 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 MRVI1Q9Y6F6 885 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 CDC45O75419 566 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 RGS20O76081 388 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 PLEKHA8P1O95397 391 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 MMP3P08254 477 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 SUPT20HL2P0C7V6 817 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 CYP2C9P11712 490 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 RXRAP19793 462 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 LIFRP42702 1097 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 CCL23P55773 120 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 RASIP1Q5U651 963 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 NFRKBQ6P4R8 1299 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 VSIG10LQ86VR7 867 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 FCHSD1Q86WN1 690 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 RAB11FIP4Q86YS3 637 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 TMTC2Q8N394 836 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 RRP36Q96EU6 259 aaKnown RBP10.44□□□□□ -0.74
USF1-204ENST00000472217 LRRC2Q9BYS8 371 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 TTYH1Q9H313 450 aaPredicted RBP10.44□□□□□ -0.74
USF1-204ENST00000472217 IL23AQ9NPF7 189 aa10.44□□□□□ -0.74
USF1-204ENST00000472217 TANC1Q9C0D5 1861 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 FRMPD4Q14CM0 1322 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.43□□□□□ -0.74
USF1-204ENST00000472217 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.43□□□□□ -0.74
USF1-204ENST00000472217 CASTP20810 708 aaKnown RBP10.43□□□□□ -0.74
USF1-204ENST00000472217 DNAJB2P25686 324 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 SMARCA1P28370 1054 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 CCND2P30279 289 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 CHMP4BP1P59074 171 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 PTPN11Q06124 597 aaPredicted RBP10.43□□□□□ -0.74
USF1-204ENST00000472217 RNF20Q5VTR2 975 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 DHX37Q8IY37 1157 aaKnown RBP10.43□□□□□ -0.74
USF1-204ENST00000472217 CMTR1Q8N1G2 835 aaKnown RBP10.43□□□□□ -0.74
USF1-204ENST00000472217 SRBD1Q8N5C6 995 aaKnown RBP10.43□□□□□ -0.74
USF1-204ENST00000472217 KAT2BQ92831 832 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 EMID1Q96A84 441 aaPredicted RBP10.43□□□□□ -0.74
USF1-204ENST00000472217 SCLYQ96I15 445 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 CCDC136Q96JN2 1154 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 ZFP91Q96JP5 570 aaPredicted RBP10.43□□□□□ -0.74
USF1-204ENST00000472217 LZTS2Q9BRK4 669 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 SEMA6BQ9H3T3 888 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 FOXD4L1Q9NU39 408 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 SEC63Q9UGP8 760 aaKnown RBP10.43□□□□□ -0.74
USF1-204ENST00000472217 SLC12A7Q9Y666 1083 aa10.43□□□□□ -0.74
USF1-204ENST00000472217 BAZ2BQ9UIF8 2168 aaKnown RBP10.42□□□□□ -0.74
USF1-204ENST00000472217 TMEM265A0A087WTH1 108 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 SORBS3O60504 671 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 FGBP02675 491 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 CALM1P0DP23 149 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 CALM2P0DP24 149 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 CALM3P0DP25 149 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 UBA1P22314 1058 aaKnown RBP10.42□□□□□ -0.74
USF1-204ENST00000472217 GNAQP50148 359 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 LAMC2Q13753 1193 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 DGKDQ16760 1214 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 ADCK5Q3MIX3 580 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 SGMS1Q86VZ5 419 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 MICU3Q86XE3 530 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 RASEFQ8IZ41 740 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 PPTC7Q8NI37 304 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 HERVK_113Q902F9 699 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 GPKOWQ92917 476 aaPredicted RBP eCLIP10.42□□□□□ -0.74
USF1-204ENST00000472217 VWCEQ96DN2 955 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 NEK1Q96PY6 1258 aa10.42□□□□□ -0.74
USF1-204ENST00000472217 CDX2Q99626 313 aaPredicted RBP10.42□□□□□ -0.74
USF1-204ENST00000472217 CXXC1Q9P0U4 656 aaPredicted RBP10.42□□□□□ -0.74
USF1-204ENST00000472217 hCG_1642624A0A1W2PR95 340 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 GRXCR1A8MXD5 290 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 GGPS1O95749 300 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 ZNF286BP0CG31 522 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 TGFB3P10600 412 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 HOXD8P13378 290 aaPredicted RBP10.41□□□□□ -0.74
USF1-204ENST00000472217 PBX2P40425 430 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 MRPS9P82933 396 aaKnown RBP10.41□□□□□ -0.74
USF1-204ENST00000472217 SP2Q02086 613 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 HSDL1Q3SXM5 330 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 CELF3Q5SZQ8 465 aaKnown RBP10.41□□□□□ -0.74
USF1-204ENST00000472217 MYSM1Q5VVJ2 828 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 KCNV1Q6PIU1 500 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 APOA5Q6Q788 366 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 USP17L6PQ6QN14 398 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 TMTC3Q6ZXV5 915 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 OTOP2Q7RTS6 562 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 SESTD1Q86VW0 696 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 CCDC82Q8N4S0 544 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 FANCBQ8NB91 859 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 SMARCC2Q8TAQ2 1214 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 TCEANC2Q96MN5 208 aa10.41□□□□□ -0.74
USF1-204ENST00000472217 INPP4AQ96PE3 977 aaPredicted RBP10.41□□□□□ -0.74
USF1-204ENST00000472217 CTAGE1Q96RT6 745 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms