RNA–Protein interactions for RNA: ENST00000472017.1

PRKCZ-213, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-213	ENST00000472017	CALM3	P0DP25	149 aa		13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	GNAQ	P50148	359 aa		13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	ARHGAP1	Q07960	439 aa		13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	COL9A3	Q14050	684 aa	Predicted RBP	13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	NBPF20	Q3BBV1	942 aa		13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	FAM47C	Q5HY64	1035 aa		13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	TMEM240	Q5SV17	173 aa		13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	C16orf59	Q7L2K0	433 aa		13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	FCHSD1	Q86WN1	690 aa		13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	AFG1L	Q8WV93	481 aa		13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	NOC4L	Q9BVI4	516 aa	Known RBP	13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	TRMT13	Q9NUP7	481 aa	Known RBP	13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	UMODL1	Q5DID0	1318 aa		13.57	□□□□□ -0.24
PRKCZ-213	ENST00000472017	MMP3	P08254	477 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	ACR	P10323	421 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	CCL23	P55773	120 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	PGM5	Q15124	567 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	NFRKB	Q6P4R8	1299 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	KCNV1	Q6PIU1	500 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	VSIG10L	Q86VR7	867 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	FAM161B	Q96MY7	647 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	NEK1	Q96PY6	1258 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	LRRC2	Q9BYS8	371 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	IL23A	Q9NPF7	189 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	SEC63	Q9UGP8	760 aa	Known RBP	13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	STXBP5L	Q9Y2K9	1186 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	SLC12A7	Q9Y666	1083 aa		13.56	□□□□□ -0.24
PRKCZ-213	ENST00000472017	TANC1	Q9C0D5	1861 aa		13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	PLEKHA8P1	O95397	391 aa		13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	CYP2C9	P11712	490 aa		13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	RXRA	P19793	462 aa		13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	CAST	P20810	708 aa	Known RBP	13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	CCND2	P30279	289 aa		13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	CHMP4BP1	P59074	171 aa		13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	PTPN11	Q06124	597 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	LAMC2	Q13753	1193 aa		13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	DGKD	Q16760	1214 aa		13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	ZNF365	Q70YC5	407 aa		13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	DHX37	Q8IY37	1157 aa	Known RBP	13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	CMTR1	Q8N1G2	835 aa	Known RBP	13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	SRBD1	Q8N5C6	995 aa	Known RBP	13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	IL31RA	Q8NI17	732 aa		13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	PPP1R13L	Q8WUF5	828 aa		13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	EMID1	Q96A84	441 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	WNT8A	Q9H1J5	351 aa		13.55	□□□□□ -0.24
PRKCZ-213	ENST00000472017	MYO9B	Q13459	2157 aa		13.54	□□□□□ -0.24
PRKCZ-213	ENST00000472017	RGS20	O76081	388 aa		13.54	□□□□□ -0.24
PRKCZ-213	ENST00000472017	FGB	P02675	491 aa		13.54	□□□□□ -0.24
PRKCZ-213	ENST00000472017	SYNE3	Q6ZMZ3	975 aa		13.54	□□□□□ -0.24
PRKCZ-213	ENST00000472017	SGMS1	Q86VZ5	419 aa		13.54	□□□□□ -0.24
PRKCZ-213	ENST00000472017	RAB11FIP4	Q86YS3	637 aa		13.54	□□□□□ -0.24
PRKCZ-213	ENST00000472017	FANCB	Q8NB91	859 aa		13.54	□□□□□ -0.24
PRKCZ-213	ENST00000472017	CUL5	Q93034	780 aa		13.54	□□□□□ -0.24
PRKCZ-213	ENST00000472017	GUCD1	Q96NT3	240 aa		13.54	□□□□□ -0.24
PRKCZ-213	ENST00000472017	SEMA6B	Q9H3T3	888 aa		13.54	□□□□□ -0.24
PRKCZ-213	ENST00000472017	KAT6A	Q92794	2004 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	TGFB3	P10600	412 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	KRT32	Q14532	448 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	TSGA10IP	Q3SY00	556 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	RASIP1	Q5U651	963 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	MYSM1	Q5VVJ2	828 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	DHX32	Q7L7V1	743 aa	Known RBP	13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	MICU3	Q86XE3	530 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	RASEF	Q8IZ41	740 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	RPUSD2	Q8IZ73	545 aa	Known RBP	13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	CCDC82	Q8N4S0	544 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	PPTC7	Q8NI37	304 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	SMARCC2	Q8TAQ2	1214 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	KAT2B	Q92831	832 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	SCLY	Q96I15	445 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	ZFP91	Q96JP5	570 aa	Predicted RBP	13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	MTIF3	Q9H2K0	278 aa	Known RBP	13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	NOD1	Q9Y239	953 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	FRMPD4	Q14CM0	1322 aa		13.53	□□□□□ -0.24
PRKCZ-213	ENST00000472017	TMEM265	A0A087WTH1	108 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	PIK3CD	O00329	1044 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	MEIS2	O14770	477 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	STAM2	O75886	525 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	GGPS1	O95749	300 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	MRPS9	P82933	396 aa	Known RBP	13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	EXOSC10	Q01780	885 aa	Known RBP	13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	SP2	Q02086	613 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	ADCK5	Q3MIX3	580 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	GNPTAB	Q3T906	1256 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	CELF3	Q5SZQ8	465 aa	Known RBP	13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	APOA5	Q6Q788	366 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	USP17L6P	Q6QN14	398 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	TMTC3	Q6ZXV5	915 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	SESTD1	Q86VW0	696 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	HERVK_113	Q902F9	699 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	TCEANC2	Q96MN5	208 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	KATNAL1	Q9BW62	490 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	TTYH1	Q9H313	450 aa	Predicted RBP	13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	TET1	Q8NFU7	2136 aa		13.52	□□□□□ -0.25
PRKCZ-213	ENST00000472017	CHD9	Q3L8U1	2897 aa		13.51	□□□□□ -0.25
PRKCZ-213	ENST00000472017	hCG_1642624	A0A1W2PR95	340 aa		13.51	□□□□□ -0.25
PRKCZ-213	ENST00000472017	PITPNM1	O00562	1244 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms