RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 RRP12Q5JTH9 1297 aaKnown RBP22.31■■□□□ 1.16
NCKIPSD-209ENST00000470006 INSL6Q9Y581 213 aa22.31■■□□□ 1.16
NCKIPSD-209ENST00000470006 TOP1P11387 765 aaKnown RBP22.3■■□□□ 1.16
NCKIPSD-209ENST00000470006 NHLH1Q02575 133 aa22.3■■□□□ 1.16
NCKIPSD-209ENST00000470006 USH1GQ495M9 461 aa22.3■■□□□ 1.16
NCKIPSD-209ENST00000470006 SESTD1Q86VW0 696 aa22.3■■□□□ 1.16
NCKIPSD-209ENST00000470006 CTAGE1Q96RT6 745 aa22.3■■□□□ 1.16
NCKIPSD-209ENST00000470006 HDAC6Q9UBN7 1215 aa22.3■■□□□ 1.16
NCKIPSD-209ENST00000470006 FAM50BQ9Y247 325 aa22.3■■□□□ 1.16
NCKIPSD-209ENST00000470006 DGKDQ16760 1214 aa22.29■■□□□ 1.16
NCKIPSD-209ENST00000470006 ZMYM1Q5SVZ6 1142 aa22.29■■□□□ 1.16
NCKIPSD-209ENST00000470006 MYOCDQ8IZQ8 938 aa22.29■■□□□ 1.16
NCKIPSD-209ENST00000470006 KAT2BQ92831 832 aa22.29■■□□□ 1.16
NCKIPSD-209ENST00000470006 MRPL38Q96DV4 380 aaKnown RBP22.29■■□□□ 1.16
NCKIPSD-209ENST00000470006 FBXL18Q96ME1 805 aa22.29■■□□□ 1.16
NCKIPSD-209ENST00000470006 TMEM47Q9BQJ4 181 aa22.29■■□□□ 1.16
NCKIPSD-209ENST00000470006 GTF2IRD1Q9UHL9 959 aa22.29■■□□□ 1.16
NCKIPSD-209ENST00000470006 AMHP03971 560 aa22.28■■□□□ 1.16
NCKIPSD-209ENST00000470006 PSEN2P49810 448 aa22.28■■□□□ 1.16
NCKIPSD-209ENST00000470006 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.28■■□□□ 1.16
NCKIPSD-209ENST00000470006 RBAK-RBAKDNI3L0D1 243 aa22.27■■□□□ 1.16
NCKIPSD-209ENST00000470006 ARHGAP1Q07960 439 aa22.27■■□□□ 1.16
NCKIPSD-209ENST00000470006 PTK7Q13308 1070 aa22.27■■□□□ 1.16
NCKIPSD-209ENST00000470006 TIGD5Q53EQ6 642 aa22.27■■□□□ 1.16
NCKIPSD-209ENST00000470006 ZNF618Q5T7W0 954 aa22.27■■□□□ 1.16
NCKIPSD-209ENST00000470006 CCDC62Q6P9F0 684 aa22.27■■□□□ 1.16
NCKIPSD-209ENST00000470006 DHX37Q8IY37 1157 aaKnown RBP22.27■■□□□ 1.16
NCKIPSD-209ENST00000470006 KATNAL1Q9BW62 490 aa22.27■■□□□ 1.16
NCKIPSD-209ENST00000470006 LGR5O75473 907 aa22.26■■□□□ 1.15
NCKIPSD-209ENST00000470006 RBL2Q08999 1139 aa22.26■■□□□ 1.15
NCKIPSD-209ENST00000470006 MFSD10Q14728 455 aa22.26■■□□□ 1.15
NCKIPSD-209ENST00000470006 BANK1Q8NDB2 785 aa22.26■■□□□ 1.15
NCKIPSD-209ENST00000470006 NEK9Q8TD19 979 aa22.26■■□□□ 1.15
NCKIPSD-209ENST00000470006 ORC4O43929 436 aa22.25■■□□□ 1.15
NCKIPSD-209ENST00000470006 PDHBP11177 359 aa22.25■■□□□ 1.15
NCKIPSD-209ENST00000470006 NOVP48745 357 aa22.25■■□□□ 1.15
NCKIPSD-209ENST00000470006 GPM6BQ13491 265 aa22.25■■□□□ 1.15
NCKIPSD-209ENST00000470006 STXBP2Q15833 593 aa22.25■■□□□ 1.15
NCKIPSD-209ENST00000470006 KIAA0753Q2KHM9 967 aa22.25■■□□□ 1.15
NCKIPSD-209ENST00000470006 EPC2Q52LR7 807 aa22.25■■□□□ 1.15
NCKIPSD-209ENST00000470006 KCNH6Q9H252 994 aa22.25■■□□□ 1.15
NCKIPSD-209ENST00000470006 WDR19Q8NEZ3 1342 aa22.25■■□□□ 1.15
NCKIPSD-209ENST00000470006 WDFY4Q6ZS81 3184 aa22.25■■□□□ 1.15
NCKIPSD-209ENST00000470006 MYH7BA7E2Y1 1941 aa22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 ZNF286BP0CG31 522 aa22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 ZNF200P98182 395 aaPredicted RBP22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 DBF4BQ8NFT6 615 aa22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 NSUN6Q8TEA1 469 aaKnown RBP22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 SAMD11Q96NU1 681 aa22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 TAAR1Q96RJ0 339 aa22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 YME1L1Q96TA2 773 aa22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 UPF3BQ9BZI7 483 aaKnown RBP22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 DCTPP1Q9H773 170 aa22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 ANAPC4Q9UJX5 808 aa22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 TTC41PQ6P2S7 1318 aa22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 EMSYQ7Z589 1322 aa22.24■■□□□ 1.15
NCKIPSD-209ENST00000470006 KIAA1217Q5T5P2 1943 aa22.23■■□□□ 1.15
NCKIPSD-209ENST00000470006 MICAL3Q7RTP6 2002 aa22.23■■□□□ 1.15
NCKIPSD-209ENST00000470006 UPP2O95045 317 aa22.23■■□□□ 1.15
NCKIPSD-209ENST00000470006 THPOP40225 353 aa22.23■■□□□ 1.15
NCKIPSD-209ENST00000470006 ZNF543Q08ER8 600 aa22.23■■□□□ 1.15
NCKIPSD-209ENST00000470006 TCEAL5Q5H9L2 206 aa22.23■■□□□ 1.15
NCKIPSD-209ENST00000470006 VPS53Q5VIR6 699 aa22.23■■□□□ 1.15
NCKIPSD-209ENST00000470006 RGS22Q8NE09 1264 aa22.23■■□□□ 1.15
NCKIPSD-209ENST00000470006 PABPC5Q96DU9 382 aaKnown RBP22.23■■□□□ 1.15
NCKIPSD-209ENST00000470006 CLDND1Q9NY35 253 aa22.23■■□□□ 1.15
NCKIPSD-209ENST00000470006 POTEB3A0JP26 581 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 RSPH10B2B2RC85 870 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 FOXP2O15409 715 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 RSPH10BP0C881 870 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 ZP2Q05996 745 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 MBTPS1Q14703 1052 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 ARHGEF16Q5VV41 709 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 POTEBQ6S5H4 581 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 TBC1D5Q92609 795 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 WNT8BQ93098 351 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 MFSD14AQ96MC6 490 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 RMDN3Q96TC7 470 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 PRKAG3Q9UGI9 489 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 MRVI1Q9Y6F6 885 aa22.22■■□□□ 1.15
NCKIPSD-209ENST00000470006 GOLGA8HP0CJ92 632 aa22.21■■□□□ 1.15
NCKIPSD-209ENST00000470006 HTRA4P83105 476 aaPredicted RBP22.21■■□□□ 1.15
NCKIPSD-209ENST00000470006 LAMC2Q13753 1193 aa22.21■■□□□ 1.15
NCKIPSD-209ENST00000470006 TRIM71Q2Q1W2 868 aaKnown RBP22.21■■□□□ 1.15
NCKIPSD-209ENST00000470006 HFE2Q6ZVN8 426 aa22.21■■□□□ 1.15
NCKIPSD-209ENST00000470006 SYTL5Q8TDW5 730 aaPredicted RBP22.21■■□□□ 1.15
NCKIPSD-209ENST00000470006 IWS1Q96ST2 819 aa22.21■■□□□ 1.15
NCKIPSD-209ENST00000470006 UBA5Q9GZZ9 404 aa22.21■■□□□ 1.15
NCKIPSD-209ENST00000470006 NSUN3Q9H649 340 aaKnown RBP22.21■■□□□ 1.15
NCKIPSD-209ENST00000470006 TCP11L1Q9NUJ3 509 aa22.21■■□□□ 1.15
NCKIPSD-209ENST00000470006 DDX41Q9UJV9 622 aaKnown RBP22.21■■□□□ 1.15
NCKIPSD-209ENST00000470006 H3BNC9 293 aa22.2■■□□□ 1.14
NCKIPSD-209ENST00000470006 SORBS3O60504 671 aa22.2■■□□□ 1.14
NCKIPSD-209ENST00000470006 TRAF7Q6Q0C0 670 aa22.2■■□□□ 1.14
NCKIPSD-209ENST00000470006 ADHFE1Q8IWW8 467 aa22.2■■□□□ 1.14
NCKIPSD-209ENST00000470006 TMEM192Q8IY95 271 aa22.2■■□□□ 1.14
NCKIPSD-209ENST00000470006 MIER1Q8N108 512 aa22.2■■□□□ 1.14
NCKIPSD-209ENST00000470006 PI4K2BQ8TCG2 481 aa22.2■■□□□ 1.14
NCKIPSD-209ENST00000470006 CPVLQ9H3G5 476 aa22.2■■□□□ 1.14
NCKIPSD-209ENST00000470006 F2P00734 622 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms