RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 TMEM60Q9H2L4 133 aa14.45□□□□□ -0.1
TRAF4-208ENST00000469529 A1CFQ9NQ94 594 aaKnown RBP14.45□□□□□ -0.1
TRAF4-208ENST00000469529 DDX19AQ9NUU7 478 aaKnown RBP14.45□□□□□ -0.1
TRAF4-208ENST00000469529 DDX25Q9UHL0 483 aaKnown RBP14.45□□□□□ -0.1
TRAF4-208ENST00000469529 IGLV3-22A0A075B6J6 115 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 TDP2O95551 362 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 CYP2C8P10632 490 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 ERCC3P19447 782 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 PLS1Q14651 629 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 IL17AQ16552 155 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 FAM110CQ1W6H9 321 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 IFNL1Q8IU54 200 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 SLFN12Q8IYM2 578 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 FMR1NBQ8N0W7 255 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-208ENST00000469529 IGSF22Q8N9C0 903 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 SMCR8Q8TEV9 937 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-208ENST00000469529 HAS1Q92839 578 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 SYAP1Q96A49 352 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-208ENST00000469529 RMDN3Q96TC7 470 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 MXRA8Q9BRK3 442 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 PDCD2LQ9BRP1 358 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 PYM1Q9BRP8 204 aaKnown RBP14.44□□□□□ -0.1
TRAF4-208ENST00000469529 UBIAD1Q9Y5Z9 338 aa14.44□□□□□ -0.1
TRAF4-208ENST00000469529 ADGRA2Q96PE1 1338 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 PARP14Q460N5 1801 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 DNAJC25-GNG10A0A024R161 153 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 FAM86B1E9PN63 330 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 IGF2BP3O00425 579 aaKnown RBP eCLIP14.43□□□□□ -0.1
TRAF4-208ENST00000469529 LETM1O95202 739 aaPredicted RBP14.43□□□□□ -0.1
TRAF4-208ENST00000469529 ALDH1A1P00352 501 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 FAM86B2P0C5J1 330 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 CALCRLQ16602 461 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 NSMFQ6X4W1 530 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 CCDC73Q6ZRK6 1079 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 KCTD17Q8N5Z5 321 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 FAM133AQ8N9E0 248 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 FSIP1Q8NA03 581 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 ETNPPLQ8TBG4 499 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 CLIC6Q96NY7 704 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 CCSER1Q9C0I3 900 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 CSRNP2Q9H175 543 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 PXMP2Q9NR77 195 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 HOMER2Q9NSB8 354 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 FAM13BQ9NYF5 915 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 USP25Q9UHP3 1055 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 STK24Q9Y6E0 443 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 A0A0G2JMZ2 1700 aa14.43□□□□□ -0.1
TRAF4-208ENST00000469529 B4DLN1 442 aa14.42□□□□□ -0.1
TRAF4-208ENST00000469529 SLC37A4O43826 429 aa14.42□□□□□ -0.1
TRAF4-208ENST00000469529 NR3C2P08235 984 aa14.42□□□□□ -0.1
TRAF4-208ENST00000469529 LIG1P18858 919 aa14.42□□□□□ -0.1
TRAF4-208ENST00000469529 SETQ01105 290 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-208ENST00000469529 PGM5Q15124 567 aa14.42□□□□□ -0.1
TRAF4-208ENST00000469529 SLC30A10Q6XR72 485 aa14.42□□□□□ -0.1
TRAF4-208ENST00000469529 ANKRD35Q8N283 1001 aa14.42□□□□□ -0.1
TRAF4-208ENST00000469529 PAGR1Q9BTK6 254 aa14.42□□□□□ -0.1
TRAF4-208ENST00000469529 RAB34Q9BZG1 259 aa14.42□□□□□ -0.1
TRAF4-208ENST00000469529 GOLPH3LQ9H4A5 285 aa14.42□□□□□ -0.1
TRAF4-208ENST00000469529 JADE2Q9NQC1 790 aa14.42□□□□□ -0.1
TRAF4-208ENST00000469529 ADD3Q9UEY8 706 aaKnown RBP14.42□□□□□ -0.1
TRAF4-208ENST00000469529 VWA3AA6NCI4 1184 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 CTAGE5O15320 804 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 TLR2O60603 784 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 FCER1AP12319 257 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 PFKFB1P16118 471 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 EDNRBP24530 442 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 ZNF76P36508 570 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 NDUFA8P51970 172 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 MRPS9P82933 396 aaKnown RBP14.41□□□□□ -0.1
TRAF4-208ENST00000469529 GRIN1Q05586 938 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 ARHGEF16Q5VV41 709 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 C17orf99Q6UX52 265 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 RBM43Q6ZSC3 357 aaKnown RBP14.41□□□□□ -0.1
TRAF4-208ENST00000469529 NCAPG2Q86XI2 1143 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 POTEDQ86YR6 584 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 MORC4Q8TE76 937 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 SLC5A5Q92911 643 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 ABHD8Q96I13 439 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 RIT2Q99578 217 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 CFHR5Q9BXR6 569 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 DACT1Q9NYF0 836 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 KCNH3Q9ULD8 1083 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 PCDHA12Q9UN75 941 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 DIS3Q9Y2L1 958 aaKnown RBP14.41□□□□□ -0.1
TRAF4-208ENST00000469529 MRVI1Q9Y6F6 885 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 TCHHQ07283 1943 aa14.41□□□□□ -0.1
TRAF4-208ENST00000469529 A0A1B0GVL5 298 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 POTEB2H3BUK9 544 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 MSH4O15457 936 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 NR1I2O75469 434 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 ZNF202O95125 648 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 TBC1D8O95759 1140 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 ITGB5P18084 799 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 CCND2P30279 289 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 MAPK4P31152 587 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 KCTD2Q14681 263 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 TMEM266Q2M3C6 531 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 PRR16Q569H4 304 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 CCDC183Q5T5S1 534 aa14.4□□□□□ -0.1
TRAF4-208ENST00000469529 KANK3Q6NY19 840 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms