RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 POLD1P28340 1107 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 KRT9P35527 623 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 MRPS25P82663 173 aaKnown RBP13.65□□□□□ -0.22
USP11-206ENST00000469080 PAK1Q13153 545 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 TOGARAM2Q6ZUX3 1019 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 ANKRD13CQ8N6S4 541 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 MLKLQ8NB16 471 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 SUGCTQ9HAC7 445 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.65□□□□□ -0.22
USP11-206ENST00000469080 DOT1LQ8TEK3 1739 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 ECE2O60344 883 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 RPS6KA3P51812 740 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 ICA1Q05084 483 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 MTA1Q13330 715 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 TMEM266Q2M3C6 531 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 C1QTNF12Q5T7M4 302 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 MFSD4BQ5TF39 518 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 SLFN13Q68D06 897 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 DNAJC14Q6Y2X3 702 aaPredicted RBP13.65□□□□□ -0.22
USP11-206ENST00000469080 CCDC150Q8NCX0 1101 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 PCDHA6Q9UN73 950 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 SAMM50Q9Y512 469 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 PCDHA8Q9Y5H6 950 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 DDTLA6NHG4 134 aaPredicted RBP13.65□□□□□ -0.23
USP11-206ENST00000469080 PRCPP42785 496 aa13.65□□□□□ -0.23
USP11-206ENST00000469080 E2F5Q15329 346 aa13.65□□□□□ -0.23
USP11-206ENST00000469080 ZNF569Q5MCW4 686 aa13.65□□□□□ -0.23
USP11-206ENST00000469080 NEK8Q86SG6 692 aa13.65□□□□□ -0.23
USP11-206ENST00000469080 PSTPIP2Q9H939 334 aa13.65□□□□□ -0.23
USP11-206ENST00000469080 WDR19Q8NEZ3 1342 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 PYGLP06737 847 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 EEF2P13639 858 aaKnown RBP13.64□□□□□ -0.23
USP11-206ENST00000469080 RXRBP28702 533 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 ALDH1B1P30837 517 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 TDRD12Q587J7 1177 aaKnown RBP13.64□□□□□ -0.23
USP11-206ENST00000469080 SPECC1LQ69YQ0 1117 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 RBM43Q6ZSC3 357 aaKnown RBP13.64□□□□□ -0.23
USP11-206ENST00000469080 KIAA1328Q86T90 577 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 DGKHQ86XP1 1220 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 FERMT2Q96AC1 680 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 GDAP1L1Q96MZ0 367 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 NLRC4Q9NPP4 1024 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 TCEAL9Q9UHQ7 104 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
USP11-206ENST00000469080 ACTN4O43707 911 aaKnown RBP13.64□□□□□ -0.23
USP11-206ENST00000469080 MYO1BO43795 1136 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 RNASE9P60153 205 aaKnown RBP13.64□□□□□ -0.23
USP11-206ENST00000469080 GRIK3Q13003 919 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 MORC3Q14149 939 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 COL4A1P02462 1669 aa13.64□□□□□ -0.23
USP11-206ENST00000469080 B4DLN1 442 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 ORC4O43929 436 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 OR52Z1P0C646 297 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 DPYDQ12882 1025 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 KRT79Q5XKE5 535 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 ADGRF4Q8IZF3 695 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 PKD1L3Q7Z443 1732 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 ABCC6O95255 1503 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 STK36Q9NRP7 1315 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 NPHP3-ACAD11A0A0J9YXS1 232 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 ENC1O14682 589 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 PSMA7O14818 248 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 RANBP1P43487 201 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 IL17AQ16552 155 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 CEP85LQ5SZL2 805 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 RDH13Q8NBN7 331 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
USP11-206ENST00000469080 AFAP1L1Q8TED9 768 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 HPSEQ9Y251 543 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 PLCH1Q4KWH8 1693 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 MACROD2A1Z1Q3 448 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 AKR1B15C9JRZ8 316 aaPredicted RBP13.63□□□□□ -0.23
USP11-206ENST00000469080 CDR1P51861 262 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 CCDC40Q4G0X9 1142 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 CCDC181Q5TID7 509 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 CCDC43Q96MW1 224 aaKnown RBP13.63□□□□□ -0.23
USP11-206ENST00000469080 SCLT1Q96NL6 688 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 KDM4CQ9H3R0 1056 aa13.63□□□□□ -0.23
USP11-206ENST00000469080 SPEF2Q9C093 1822 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 KCNJ18B7U540 433 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 PPP1R12BO60237 982 aaPredicted RBP13.62□□□□□ -0.23
USP11-206ENST00000469080 COQ9O75208 318 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 RHOXF2BP0C7M4 288 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 SRGNP10124 158 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 KCNJ12Q14500 433 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 RHOXF2Q9BQY4 288 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 ERLIN1O75477 346 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 TTLL1O95922 423 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 KLK7P49862 253 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 CDAN1Q8IWY9 1227 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 CAGE1Q8TC20 777 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 SAAL1Q96ER3 474 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 STK32BQ9NY57 414 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 ANAPC4Q9UJX5 808 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 KIAA1024Q9UPX6 916 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 TRAF5O00463 557 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 EZRP15311 586 aaKnown RBP13.62□□□□□ -0.23
USP11-206ENST00000469080 NPR1P16066 1061 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 ABCD1P33897 745 aa13.62□□□□□ -0.23
USP11-206ENST00000469080 CHMP4BP1P59074 171 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms