RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 CHST3Q7LGC8 479 aa16.57■□□□□ 0.24
ATG4B-214ENST00000465399 CAGE1Q8TC20 777 aa16.57■□□□□ 0.24
ATG4B-214ENST00000465399 PHOSPHO2Q8TCD6 241 aa16.57■□□□□ 0.24
ATG4B-214ENST00000465399 TBC1D5Q92609 795 aa16.57■□□□□ 0.24
ATG4B-214ENST00000465399 ZSWIM5Q9P217 1185 aa16.57■□□□□ 0.24
ATG4B-214ENST00000465399 COL20A1Q9P218 1284 aa16.57■□□□□ 0.24
ATG4B-214ENST00000465399 CTNNA3Q9UI47 895 aa16.57■□□□□ 0.24
ATG4B-214ENST00000465399 COL4A4P53420 1690 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-214ENST00000465399 PRRC2BQ5JSZ5 2229 aaKnown RBP16.56■□□□□ 0.24
ATG4B-214ENST00000465399 BAIAP3O94812 1187 aa16.56■□□□□ 0.24
ATG4B-214ENST00000465399 EIF2AK2P19525 551 aaKnown RBP16.56■□□□□ 0.24
ATG4B-214ENST00000465399 SESTD1Q86VW0 696 aa16.56■□□□□ 0.24
ATG4B-214ENST00000465399 AFAP1L1Q8TED9 768 aa16.56■□□□□ 0.24
ATG4B-214ENST00000465399 JMJD4Q9H9V9 463 aa16.56■□□□□ 0.24
ATG4B-214ENST00000465399 VAT1LQ9HCJ6 419 aa16.56■□□□□ 0.24
ATG4B-214ENST00000465399 NCOR1O75376 2440 aa16.55■□□□□ 0.24
ATG4B-214ENST00000465399 KIF28PB7ZC32 967 aa16.55■□□□□ 0.24
ATG4B-214ENST00000465399 GTPBP6O43824 516 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-214ENST00000465399 CFBP00751 764 aa16.55■□□□□ 0.24
ATG4B-214ENST00000465399 DGKDQ16760 1214 aa16.55■□□□□ 0.24
ATG4B-214ENST00000465399 IFIT1BQ5T764 474 aaKnown RBP16.55■□□□□ 0.24
ATG4B-214ENST00000465399 HERC6Q8IVU3 1022 aa16.55■□□□□ 0.24
ATG4B-214ENST00000465399 ADAMTS19Q8TE59 1207 aa16.55■□□□□ 0.24
ATG4B-214ENST00000465399 KATNAL1Q9BW62 490 aa16.55■□□□□ 0.24
ATG4B-214ENST00000465399 AMNQ9BXJ7 453 aa16.55■□□□□ 0.24
ATG4B-214ENST00000465399 MRVI1Q9Y6F6 885 aa16.55■□□□□ 0.24
ATG4B-214ENST00000465399 TRANK1O15050 2925 aa16.55■□□□□ 0.24
ATG4B-214ENST00000465399 EIF3JO75822 258 aaKnown RBP16.54■□□□□ 0.24
ATG4B-214ENST00000465399 IGHDP01880 384 aa16.54■□□□□ 0.24
ATG4B-214ENST00000465399 KCNJ6P48051 423 aa16.54■□□□□ 0.24
ATG4B-214ENST00000465399 GDF6Q6KF10 455 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-214ENST00000465399 EMID1Q96A84 441 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-214ENST00000465399 UHRF1Q96T88 793 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-214ENST00000465399 CERS4Q9HA82 394 aa16.54■□□□□ 0.24
ATG4B-214ENST00000465399 PXMP2Q9NR77 195 aa16.54■□□□□ 0.24
ATG4B-214ENST00000465399 DDX41Q9UJV9 622 aaKnown RBP16.54■□□□□ 0.24
ATG4B-214ENST00000465399 REV3LO60673 3130 aa16.53■□□□□ 0.24
ATG4B-214ENST00000465399 PARNO95453 639 aaKnown RBP16.53■□□□□ 0.24
ATG4B-214ENST00000465399 NR3C2P08235 984 aa16.53■□□□□ 0.24
ATG4B-214ENST00000465399 SELPP16109 830 aa16.53■□□□□ 0.24
ATG4B-214ENST00000465399 LAMC2Q13753 1193 aa16.53■□□□□ 0.24
ATG4B-214ENST00000465399 SKIV2LQ15477 1246 aaKnown RBP16.53■□□□□ 0.24
ATG4B-214ENST00000465399 AAK1Q2M2I8 961 aa16.53■□□□□ 0.24
ATG4B-214ENST00000465399 LRRC8DQ7L1W4 858 aa16.53■□□□□ 0.24
ATG4B-214ENST00000465399 C7orf31Q8N865 590 aa16.53■□□□□ 0.24
ATG4B-214ENST00000465399 KAT2BQ92831 832 aa16.53■□□□□ 0.24
ATG4B-214ENST00000465399 YTHDC1Q96MU7 727 aaKnown RBP16.53■□□□□ 0.24
ATG4B-214ENST00000465399 GTF2IRD1Q9UHL9 959 aa16.53■□□□□ 0.24
ATG4B-214ENST00000465399 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
ATG4B-214ENST00000465399 RFXAPO00287 272 aa16.52■□□□□ 0.24
ATG4B-214ENST00000465399 TLL1O43897 1013 aa16.52■□□□□ 0.24
ATG4B-214ENST00000465399 POU3F3P20264 500 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-214ENST00000465399 PSEN2P49810 448 aa16.52■□□□□ 0.24
ATG4B-214ENST00000465399 HSD17B4P51659 736 aa16.52■□□□□ 0.24
ATG4B-214ENST00000465399 TAP1Q03518 808 aa16.52■□□□□ 0.24
ATG4B-214ENST00000465399 DHX37Q8IY37 1157 aaKnown RBP16.52■□□□□ 0.24
ATG4B-214ENST00000465399 STAG2Q8N3U4 1231 aa16.52■□□□□ 0.24
ATG4B-214ENST00000465399 PPTC7Q8NI37 304 aa16.52■□□□□ 0.24
ATG4B-214ENST00000465399 ARNTL2Q8WYA1 636 aa16.52■□□□□ 0.24
ATG4B-214ENST00000465399 CTAGE1Q96RT6 745 aa16.52■□□□□ 0.24
ATG4B-214ENST00000465399 ALG1Q9BT22 464 aa16.52■□□□□ 0.24
ATG4B-214ENST00000465399 MAP3K20Q9NYL2 800 aaKnown RBP16.52■□□□□ 0.24
ATG4B-214ENST00000465399 MTCH2Q9Y6C9 303 aa16.52■□□□□ 0.24
ATG4B-214ENST00000465399 SIP14410 1827 aa16.52■□□□□ 0.23
ATG4B-214ENST00000465399 KLRF2D3W0D1 207 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 ZBTB5O15062 677 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 F2P00734 622 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 ZNF286BP0CG31 522 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 CKBP12277 381 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 MYCLP12524 364 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-214ENST00000465399 GHRHRQ02643 423 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 RBL2Q08999 1139 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 TRDNQ13061 729 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 MFSD10Q14728 455 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 CNKSR3Q6P9H4 555 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 KCNV1Q6PIU1 500 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 SAMD3Q8N6K7 520 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 HDAC6Q9UBN7 1215 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 PCDHA1Q9Y5I3 950 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 MICAL3Q7RTP6 2002 aa16.51■□□□□ 0.23
ATG4B-214ENST00000465399 DOCK5Q9H7D0 1870 aa16.5■□□□□ 0.23
ATG4B-214ENST00000465399 XIRP2A4UGR9 3374 aa16.5■□□□□ 0.23
ATG4B-214ENST00000465399 OPLAHO14841 1288 aa16.5■□□□□ 0.23
ATG4B-214ENST00000465399 WDR5P61964 334 aaKnown RBP16.5■□□□□ 0.23
ATG4B-214ENST00000465399 TRAF1Q13077 416 aa16.5■□□□□ 0.23
ATG4B-214ENST00000465399 SEC23AQ15436 765 aa16.5■□□□□ 0.23
ATG4B-214ENST00000465399 KIAA0753Q2KHM9 967 aa16.5■□□□□ 0.23
ATG4B-214ENST00000465399 EXOC6Q8TAG9 804 aa16.5■□□□□ 0.23
ATG4B-214ENST00000465399 DHX38Q92620 1227 aaKnown RBP16.5■□□□□ 0.23
ATG4B-214ENST00000465399 MTMR8Q96EF0 704 aa16.5■□□□□ 0.23
ATG4B-214ENST00000465399 PDCD2LQ9BRP1 358 aa16.5■□□□□ 0.23
ATG4B-214ENST00000465399 ZBED2Q9BTP6 218 aa16.5■□□□□ 0.23
ATG4B-214ENST00000465399 MAD2L2Q9UI95 211 aa16.5■□□□□ 0.23
ATG4B-214ENST00000465399 PALM3A6NDB9 673 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-214ENST00000465399 EPOPA6NHQ4 379 aa16.49■□□□□ 0.23
ATG4B-214ENST00000465399 HAS3O00219 553 aa16.49■□□□□ 0.23
ATG4B-214ENST00000465399 EFCAB14O75071 495 aa16.49■□□□□ 0.23
ATG4B-214ENST00000465399 CXCL10P02778 98 aa16.49■□□□□ 0.23
ATG4B-214ENST00000465399 TFF2Q03403 129 aa16.49■□□□□ 0.23
ATG4B-214ENST00000465399 PTK7Q13308 1070 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms