RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 RCAN1P53805 252 aa27.63■■■□□ 2.01
SMKR1-201ENST00000462322 FAAP100Q0VG06 881 aa27.63■■■□□ 2.01
SMKR1-201ENST00000462322 USP17L6PQ6QN14 398 aa27.63■■■□□ 2.01
SMKR1-201ENST00000462322 MRVI1Q9Y6F6 885 aa27.63■■■□□ 2.01
SMKR1-201ENST00000462322 CNTNAP5Q8WYK1 1306 aa27.63■■■□□ 2.01
SMKR1-201ENST00000462322 GH1P01241 217 aa27.62■■■□□ 2.01
SMKR1-201ENST00000462322 ITGA7Q13683 1181 aa27.62■■■□□ 2.01
SMKR1-201ENST00000462322 HEATR3Q7Z4Q2 680 aa27.62■■■□□ 2.01
SMKR1-201ENST00000462322 PSTPIP2Q9H939 334 aa27.62■■■□□ 2.01
SMKR1-201ENST00000462322 KIAA1217Q5T5P2 1943 aa27.62■■■□□ 2.01
SMKR1-201ENST00000462322 A6NJR5 290 aa27.61■■■□□ 2.01
SMKR1-201ENST00000462322 KIAA0355O15063 1070 aa27.61■■■□□ 2.01
SMKR1-201ENST00000462322 METAP2P50579 478 aaKnown RBP eCLIP27.61■■■□□ 2.01
SMKR1-201ENST00000462322 PSMC6P62333 389 aa27.61■■■□□ 2.01
SMKR1-201ENST00000462322 GPKOWQ92917 476 aaPredicted RBP eCLIP27.61■■■□□ 2.01
SMKR1-201ENST00000462322 BADQ92934 168 aa27.61■■■□□ 2.01
SMKR1-201ENST00000462322 FAM217BQ9NTX9 383 aaPredicted RBP27.61■■■□□ 2.01
SMKR1-201ENST00000462322 DDX41Q9UJV9 622 aaKnown RBP27.61■■■□□ 2.01
SMKR1-201ENST00000462322 PIK3CDO00329 1044 aa27.6■■■□□ 2.01
SMKR1-201ENST00000462322 MEIS2O14770 477 aa27.6■■■□□ 2.01
SMKR1-201ENST00000462322 TLR3O15455 904 aaKnown RBP27.6■■■□□ 2.01
SMKR1-201ENST00000462322 RGS20O76081 388 aa27.6■■■□□ 2.01
SMKR1-201ENST00000462322 RAG1P15918 1043 aa27.6■■■□□ 2.01
SMKR1-201ENST00000462322 CDC27P30260 824 aa27.6■■■□□ 2.01
SMKR1-201ENST00000462322 PURAQ00577 322 aaKnown RBP27.6■■■□□ 2.01
SMKR1-201ENST00000462322 FUT2Q10981 343 aa27.6■■■□□ 2.01
SMKR1-201ENST00000462322 TDHQ8IZJ6 230 aa27.6■■■□□ 2.01
SMKR1-201ENST00000462322 FBXL16Q8N461 479 aa27.6■■■□□ 2.01
SMKR1-201ENST00000462322 SLC43A3Q8NBI5 491 aa27.6■■■□□ 2.01
SMKR1-201ENST00000462322 ZFP91Q96JP5 570 aaPredicted RBP27.6■■■□□ 2.01
SMKR1-201ENST00000462322 MTG1Q9BT17 334 aaPredicted RBP27.6■■■□□ 2.01
SMKR1-201ENST00000462322 V9GY48 417 aaPredicted RBP27.6■■■□□ 2.01
SMKR1-201ENST00000462322 GRIN2DO15399 1336 aa27.6■■■□□ 2.01
SMKR1-201ENST00000462322 CCDC196A0A1B0GTZ2 297 aa27.59■■■□□ 2.01
SMKR1-201ENST00000462322 KPNA6O60684 536 aa27.59■■■□□ 2.01
SMKR1-201ENST00000462322 ARHGAP1Q07960 439 aa27.59■■■□□ 2.01
SMKR1-201ENST00000462322 KCNV1Q6PIU1 500 aa27.59■■■□□ 2.01
SMKR1-201ENST00000462322 RUFY3Q7L099 469 aa27.59■■■□□ 2.01
SMKR1-201ENST00000462322 FAM126BQ8IXS8 530 aa27.59■■■□□ 2.01
SMKR1-201ENST00000462322 AFG1LQ8WV93 481 aa27.59■■■□□ 2.01
SMKR1-201ENST00000462322 SEZ6LQ9BYH1 1024 aa27.59■■■□□ 2.01
SMKR1-201ENST00000462322 AGXT2Q9BYV1 514 aa27.59■■■□□ 2.01
SMKR1-201ENST00000462322 ZSWIM6Q9HCJ5 1215 aa27.59■■■□□ 2.01
SMKR1-201ENST00000462322 LTBP2Q14767 1821 aa27.59■■■□□ 2.01
SMKR1-201ENST00000462322 FRMPD4Q14CM0 1322 aa27.59■■■□□ 2.01
SMKR1-201ENST00000462322 ITGB8P26012 769 aa27.58■■■□□ 2.01
SMKR1-201ENST00000462322 ADD1P35611 737 aaKnown RBP27.58■■■□□ 2.01
SMKR1-201ENST00000462322 CYP46A1Q9Y6A2 500 aa27.58■■■□□ 2.01
SMKR1-201ENST00000462322 WWC2Q6AWC2 1192 aa27.57■■■□□ 2
SMKR1-201ENST00000462322 TBX21Q9UL17 535 aa27.57■■■□□ 2
SMKR1-201ENST00000462322 NAPAP54920 295 aa27.56■■■□□ 2
SMKR1-201ENST00000462322 DHX37Q8IY37 1157 aaKnown RBP27.56■■■□□ 2
SMKR1-201ENST00000462322 TM6SF1Q9BZW5 370 aa27.56■■■□□ 2
SMKR1-201ENST00000462322 STAM2O75886 525 aa27.55■■■□□ 2
SMKR1-201ENST00000462322 SLC34A2O95436 690 aa27.55■■■□□ 2
SMKR1-201ENST00000462322 CD4P01730 458 aa27.55■■■□□ 2
SMKR1-201ENST00000462322 MMP3P08254 477 aa27.55■■■□□ 2
SMKR1-201ENST00000462322 MRPS9P82933 396 aaKnown RBP27.55■■■□□ 2
SMKR1-201ENST00000462322 LAMC2Q13753 1193 aa27.55■■■□□ 2
SMKR1-201ENST00000462322 UBE2SQ16763 222 aa27.55■■■□□ 2
SMKR1-201ENST00000462322 GNPTABQ3T906 1256 aa27.55■■■□□ 2
SMKR1-201ENST00000462322 EMID1Q96A84 441 aaPredicted RBP27.55■■■□□ 2
SMKR1-201ENST00000462322 RTEL1Q9NZ71 1219 aa27.55■■■□□ 2
SMKR1-201ENST00000462322 TIMP1P01033 207 aa27.54■■■□□ 2
SMKR1-201ENST00000462322 TGFB3P10600 412 aa27.54■■■□□ 2
SMKR1-201ENST00000462322 PCNX4Q63HM2 1172 aa27.54■■■□□ 2
SMKR1-201ENST00000462322 XRRA1Q6P2D8 792 aa27.54■■■□□ 2
SMKR1-201ENST00000462322 UPF3BQ9BZI7 483 aaKnown RBP27.54■■■□□ 2
SMKR1-201ENST00000462322 TRPV6Q9H1D0 765 aa27.54■■■□□ 2
SMKR1-201ENST00000462322 NID2Q14112 1375 aa27.53■■■□□ 2
SMKR1-201ENST00000462322 SPDYE3A6NKU9 549 aa27.53■■■□□ 2
SMKR1-201ENST00000462322 hCG_1984214I3L0E3 225 aa27.53■■■□□ 2
SMKR1-201ENST00000462322 SORBS3O60504 671 aa27.53■■■□□ 2
SMKR1-201ENST00000462322 GGPS1O95749 300 aa27.53■■■□□ 2
SMKR1-201ENST00000462322 NBPF20Q3BBV1 942 aa27.53■■■□□ 2
SMKR1-201ENST00000462322 PPP1R18Q6NYC8 613 aa27.53■■■□□ 2
SMKR1-201ENST00000462322 ZNF713Q8N859 430 aaPredicted RBP27.53■■■□□ 2
SMKR1-201ENST00000462322 INPP4AQ96PE3 977 aaPredicted RBP27.53■■■□□ 2
SMKR1-201ENST00000462322 ALDH8A1Q9H2A2 487 aaPredicted RBP27.53■■■□□ 2
SMKR1-201ENST00000462322 B4GALT4O60513 344 aa27.52■■■□□ 2
SMKR1-201ENST00000462322 UBA1P22314 1058 aaKnown RBP27.52■■■□□ 2
SMKR1-201ENST00000462322 PDIA3P30101 505 aaKnown RBP27.52■■■□□ 2
SMKR1-201ENST00000462322 EVCP57679 992 aa27.52■■■□□ 2
SMKR1-201ENST00000462322 CHMP4BP1P59074 171 aa27.52■■■□□ 2
SMKR1-201ENST00000462322 SP2Q02086 613 aa27.52■■■□□ 2
SMKR1-201ENST00000462322 TOB2Q14106 344 aaPredicted RBP27.52■■■□□ 2
SMKR1-201ENST00000462322 DGKDQ16760 1214 aa27.52■■■□□ 2
SMKR1-201ENST00000462322 FAM47CQ5HY64 1035 aa27.52■■■□□ 2
SMKR1-201ENST00000462322 CELF3Q5SZQ8 465 aaKnown RBP27.52■■■□□ 2
SMKR1-201ENST00000462322 MYSM1Q5VVJ2 828 aa27.52■■■□□ 2
SMKR1-201ENST00000462322 TYW1BQ6NUM6 668 aa27.52■■■□□ 2
SMKR1-201ENST00000462322 PPTC7Q8NI37 304 aa27.52■■■□□ 2
SMKR1-201ENST00000462322 BARHL2Q9NY43 387 aa27.52■■■□□ 2
SMKR1-201ENST00000462322 SCN10AQ9Y5Y9 1956 aa27.51■■■□□ 2
SMKR1-201ENST00000462322 STXBP3O00186 592 aa27.51■■□□□ 1.99
SMKR1-201ENST00000462322 SOX1O00570 391 aaPredicted RBP27.51■■□□□ 1.99
SMKR1-201ENST00000462322 ADCY7P51828 1080 aa27.51■■□□□ 1.99
SMKR1-201ENST00000462322 FPGSQ05932 587 aa27.51■■□□□ 1.99
SMKR1-201ENST00000462322 SPATA33Q96N06 139 aa27.51■■□□□ 1.99
SMKR1-201ENST00000462322 PPP1R12CQ9BZL4 782 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms