RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 C12orf60Q5U649 245 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 CNNM4Q6P4Q7 775 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 TMED8Q6PL24 325 aaPredicted RBP13□□□□□ -0.33
PDZRN3-203ENST00000462146 DGKHQ86XP1 1220 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 IFT81Q8WYA0 676 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 TMEM47Q9BQJ4 181 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 CUEDC2Q9H467 287 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 KANSL2Q9H9L4 492 aa13□□□□□ -0.33
PDZRN3-203ENST00000462146 LOC102724428A0A0B4J2F2 783 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 LAD1O00515 517 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 FTCDO95954 541 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 TSPY3P0CV98 308 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 TSPY8P0CW00 308 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 SIK1P57059 783 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 ASTE1Q2TB18 679 aaPredicted RBP12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 TDRD12Q587J7 1177 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 HGSNATQ68CP4 663 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 SH3RF3Q8TEJ3 882 aaPredicted RBP12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 MKNK2Q9HBH9 465 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 BIN2Q9UBW5 565 aaPredicted RBP12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 NAV1Q8NEY1 1877 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 SHTN1A0MZ66 631 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 SMCO2A6NFE2 343 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 ZNF233A6NK53 670 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 OPA1O60313 960 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 ZEB2O60315 1214 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 KCNQ4P56696 695 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 KCNMA1Q12791 1236 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 NNTQ13423 1086 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 MAN2A1Q16706 1144 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 PDXDC1Q6P996 788 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 EMBQ6PCB8 327 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 TBCKQ8TEA7 893 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 CAVIN3Q969G5 261 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 AK8Q96MA6 479 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 PNMA5Q96PV4 448 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 NUDT12Q9BQG2 462 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 EPB41L5Q9HCM4 733 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 PALM3A6NDB9 673 aaPredicted RBP12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 POTEMA6NI47 508 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 KLRF2D3W0D1 207 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 HEXIM1O94992 359 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 HIBADHP31937 336 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 PAFAH1B1P43034 410 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 GUCY1A3Q02108 690 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 GUCY2DQ02846 1103 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 NONOQ15233 471 aaKnown RBP eCLIP12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 GRIK5Q16478 980 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 KCNV1Q6PIU1 500 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 LRRC55Q6ZSA7 311 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 RNPC3Q96LT9 517 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 TANGO6Q9C0B7 1094 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 ZMYND12Q9H0C1 365 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 MAGEF1Q9HAY2 307 aa12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 SAP30BPQ9UHR5 308 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-203ENST00000462146 COL16A1Q07092 1604 aaPredicted RBP12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 PJA2O43164 708 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 TLR2O60603 784 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 EPB41P11171 864 aaKnown RBP12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 DIXDC1Q155Q3 683 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 ENOX2Q16206 610 aaKnown RBP12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 USP17L2Q6R6M4 530 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 GBP6Q6ZN66 633 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 CACNA2D4Q7Z3S7 1137 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 KCNK18Q7Z418 384 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 PIK3R5Q8WYR1 880 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 CDK5RAP2Q96SN8 1893 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 NDUFAB1O14561 156 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 PALMO75781 387 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 GUCY2CP25092 1073 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 SKOR1P84550 965 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 MMS22LQ6ZRQ5 1243 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 SV2BQ7L1I2 683 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 NEK8Q86SG6 692 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 DZIP1Q86YF9 867 aaKnown RBP12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 GJA10Q969M2 543 aa12.98□□□□□ -0.33
PDZRN3-203ENST00000462146 WNK3Q9BYP7 1800 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 SLC37A4O43826 429 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 SF3B3Q15393 1217 aaKnown RBP12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 PTPROQ16827 1216 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 ALS2CLQ60I27 953 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 DNAAF5Q86Y56 855 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 PROCA1Q8NCQ7 364 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 CASKIN2Q8WXE0 1202 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 CALML4Q96GE6 196 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 NOX5Q96PH1 765 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 KRT12Q99456 494 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 PACSIN1Q9BY11 444 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 FGFBP2Q9BYJ0 223 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 KLRC1P26715 233 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 INPP5BP32019 993 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 AMPD3Q01432 767 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 ARID5AQ03989 594 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 TGFBRAP1Q8WUH2 860 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 LARP4BQ92615 738 aaKnown RBP12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 UIMC1Q96RL1 719 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 GDF3Q9NR23 364 aa12.97□□□□□ -0.33
PDZRN3-203ENST00000462146 SBF2Q86WG5 1849 aa12.96□□□□□ -0.33
PDZRN3-203ENST00000462146 NOL4O94818 638 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms