RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 USP40Q9NVE5 1235 aa19.57■□□□□ 0.72
CCDC144A-210ENST00000456009 ADAM21Q9UKJ8 722 aa19.57■□□□□ 0.72
CCDC144A-210ENST00000456009 PDE2AO00408 941 aaPredicted RBP19.57■□□□□ 0.72
CCDC144A-210ENST00000456009 POLRMTO00411 1230 aaKnown RBP19.57■□□□□ 0.72
CCDC144A-210ENST00000456009 EHHADHQ08426 723 aa19.57■□□□□ 0.72
CCDC144A-210ENST00000456009 CASP8Q14790 479 aa19.57■□□□□ 0.72
CCDC144A-210ENST00000456009 DOK7Q18PE1 504 aa19.57■□□□□ 0.72
CCDC144A-210ENST00000456009 PURBQ96QR8 312 aaKnown RBP19.57■□□□□ 0.72
CCDC144A-210ENST00000456009 DDX25Q9UHL0 483 aaKnown RBP19.57■□□□□ 0.72
CCDC144A-210ENST00000456009 LRRIQ3A6PVS8 624 aaPredicted RBP19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 SHROOM1Q2M3G4 852 aaPredicted RBP19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 TMEM119Q4V9L6 283 aa19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 LRRC55Q6ZSA7 311 aa19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 ZFPM1Q8IX07 1006 aa19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 CRAMP1Q96RY5 1269 aa19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 FGFBP2Q9BYJ0 223 aa19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 MPHOSPH10O00566 681 aaKnown RBP19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 ZMYND10O75800 440 aa19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 IPO7O95373 1038 aaKnown RBP19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 USP14P54578 494 aa19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 CDK17Q00537 523 aa19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 PPP4R3AQ6IN85 833 aa19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 DNAJC19Q96DA6 116 aa19.56■□□□□ 0.72
CCDC144A-210ENST00000456009 PPEF1O14829 653 aaPredicted RBP19.55■□□□□ 0.72
CCDC144A-210ENST00000456009 HNRNPH3P31942 346 aaKnown RBP19.55■□□□□ 0.72
CCDC144A-210ENST00000456009 VAV2P52735 878 aa19.55■□□□□ 0.72
CCDC144A-210ENST00000456009 KIF5AQ12840 1032 aa19.55■□□□□ 0.72
CCDC144A-210ENST00000456009 NFIAQ12857 509 aa19.55■□□□□ 0.72
CCDC144A-210ENST00000456009 MAN2A1Q16706 1144 aa19.55■□□□□ 0.72
CCDC144A-210ENST00000456009 WDR93Q6P2C0 686 aa19.55■□□□□ 0.72
CCDC144A-210ENST00000456009 RAB34Q9BZG1 259 aa19.55■□□□□ 0.72
CCDC144A-210ENST00000456009 TBC1D7Q9P0N9 293 aa19.55■□□□□ 0.72
CCDC144A-210ENST00000456009 LRRC53A6NM62 1247 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 USP17L15C9J2P7 530 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 USP17L13C9JLJ4 530 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 USP17L11C9JVI0 530 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 USP17L18D6R9N7 530 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 USP17L22D6RA61 530 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 USP17L17D6RBQ6 530 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 USP17L19D6RCP7 530 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 USP17L20D6RJB6 530 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 EIF4A3P38919 411 aaKnown RBP19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 USP17L24Q0WX57 530 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 CCDC96Q2M329 555 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 CDC42EP5Q6NZY7 148 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 USP17L6PQ6QN14 398 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 RRAGAQ7L523 313 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 HINFPQ9BQA5 517 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 MLXIPQ9HAP2 919 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 JADE2Q9NQC1 790 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 CAPN6Q9Y6Q1 641 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 SP8Q8IXZ3 490 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 EHBP1Q8NDI1 1231 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 COA1Q9GZY4 146 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 PSTPIP2Q9H939 334 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 PCDHA12Q9UN75 941 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 PCDHA13Q9Y5I0 950 aa19.54■□□□□ 0.72
CCDC144A-210ENST00000456009 KLRG2A4D1S0 409 aaPredicted RBP19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 FAM196BA6NMK8 535 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 ZBTB5O15062 677 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 RAD21O60216 631 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 HNRNPH2P55795 449 aaKnown RBP19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 CACNB1Q02641 598 aaPredicted RBP19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 KCNMA1Q12791 1236 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 SPA17Q15506 151 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 SEPT12Q8IYM1 358 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 CUL5Q93034 780 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 SECISBP2LQ93073 1101 aaKnown RBP19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 IFIH1Q9BYX4 1025 aaKnown RBP19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 PCDHAC2Q9Y5I4 1007 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 NPHP3-ACAD11A0A0J9YXS1 232 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 E9PMD0 336 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 SSBP05455 408 aaKnown RBP eCLIP19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 KIF11P52732 1056 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 LRRC63Q05C16 580 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 COASYQ13057 564 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 BAP1Q92560 729 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 DRC1Q96MC2 740 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 ZC3H12CQ9C0D7 883 aaKnown RBP19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 KANSL2Q9H9L4 492 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 KCNQ5Q9NR82 932 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 VPS18Q9P253 973 aa19.53■□□□□ 0.72
CCDC144A-210ENST00000456009 CCDC66A2RUB6 948 aa19.52■□□□□ 0.72
CCDC144A-210ENST00000456009 MARCH6O60337 910 aa19.52■□□□□ 0.72
CCDC144A-210ENST00000456009 CACNB3P54284 484 aa19.52■□□□□ 0.72
CCDC144A-210ENST00000456009 APOBEC3HQ6NTF7 200 aaKnown RBP19.52■□□□□ 0.72
CCDC144A-210ENST00000456009 SALL4Q9UJQ4 1053 aa19.52■□□□□ 0.72
CCDC144A-210ENST00000456009 FOCADQ5VW36 1801 aa19.52■□□□□ 0.72
CCDC144A-210ENST00000456009 MOCS3O95396 460 aa19.52■□□□□ 0.71
CCDC144A-210ENST00000456009 MRPL12P52815 198 aaKnown RBP19.52■□□□□ 0.71
CCDC144A-210ENST00000456009 RAD51AP2Q09MP3 1159 aa19.52■□□□□ 0.71
CCDC144A-210ENST00000456009 GDAP1L1Q96MZ0 367 aa19.52■□□□□ 0.71
CCDC144A-210ENST00000456009 DNAJC18Q9H819 358 aa19.52■□□□□ 0.71
CCDC144A-210ENST00000456009 PANK4Q9NVE7 773 aa19.52■□□□□ 0.71
CCDC144A-210ENST00000456009 ATP6V0A2Q9Y487 856 aa19.52■□□□□ 0.71
CCDC144A-210ENST00000456009 UBR3Q6ZT12 1888 aa19.51■□□□□ 0.71
CCDC144A-210ENST00000456009 PHACTR2O75167 634 aa19.51■□□□□ 0.71
CCDC144A-210ENST00000456009 APBA1Q02410 837 aa19.51■□□□□ 0.71
CCDC144A-210ENST00000456009 ZCWPW2Q504Y3 356 aa19.51■□□□□ 0.71
CCDC144A-210ENST00000456009 ANKRD13CQ8N6S4 541 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms