RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 NSUN6Q8TEA1 469 aaKnown RBP8.78□□□□□ -1
BRCC3-208ENST00000453705 AGAP3Q96P47 875 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 KATNAL1Q9BW62 490 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 PHTF1Q9UMS5 762 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 CCDC171Q6TFL3 1326 aa8.78□□□□□ -1
BRCC3-208ENST00000453705 CAMTA2O94983 1202 aa8.77□□□□□ -1
BRCC3-208ENST00000453705 CCDC172P0C7W6 258 aa8.77□□□□□ -1
BRCC3-208ENST00000453705 NUCB2P80303 420 aa8.77□□□□□ -1
BRCC3-208ENST00000453705 NECTIN1Q15223 517 aa8.77□□□□□ -1
BRCC3-208ENST00000453705 ELF2Q15723 593 aa8.77□□□□□ -1
BRCC3-208ENST00000453705 GFOD2Q3B7J2 385 aa8.77□□□□□ -1
BRCC3-208ENST00000453705 DACT2Q5SW24 774 aa8.77□□□□□ -1
BRCC3-208ENST00000453705 MZT2BQ6NZ67 158 aa8.77□□□□□ -1
BRCC3-208ENST00000453705 CCDC81Q6ZN84 652 aa8.77□□□□□ -1
BRCC3-208ENST00000453705 RBM18Q96H35 190 aaKnown RBP8.77□□□□□ -1
BRCC3-208ENST00000453705 HELLSQ9NRZ9 838 aa8.77□□□□□ -1
BRCC3-208ENST00000453705 ZBTB21Q9ULJ3 1066 aa8.77□□□□□ -1
BRCC3-208ENST00000453705 CD2BP2O95400 341 aaKnown RBP8.77□□□□□ -1.01
BRCC3-208ENST00000453705 MMEP08473 750 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 PLCB3Q01970 1234 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 TFCP2Q12800 502 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 MRPL28Q13084 256 aaKnown RBP8.77□□□□□ -1.01
BRCC3-208ENST00000453705 VWA3BQ502W6 1294 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 CFAP58Q5T655 872 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 SAPCD2Q86UD0 394 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 TAX1BP1Q86VP1 789 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 VGLL2Q8N8G2 317 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 SEL1LQ9UBV2 794 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 TRPC6Q9Y210 931 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 ZBTB1Q9Y2K1 713 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 DDX11L8A8MPP1 907 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 ALG1L2C9J202 215 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 CPLX1O14810 134 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 TMCC2O75069 709 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 CTCFP49711 727 aaPredicted RBP8.77□□□□□ -1.01
BRCC3-208ENST00000453705 CTSWP56202 376 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 PURAQ00577 322 aaKnown RBP8.77□□□□□ -1.01
BRCC3-208ENST00000453705 KRT27Q7Z3Y8 459 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 FBXL16Q8N461 479 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 COG1Q8WTW3 980 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 RSAD2Q8WXG1 361 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 ASIC4Q96FT7 647 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 PCDHB9Q9Y5E1 797 aa8.77□□□□□ -1.01
BRCC3-208ENST00000453705 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.77□□□□□ -1.01
BRCC3-208ENST00000453705 MYO5AQ9Y4I1 1855 aaKnown RBP8.76□□□□□ -1.01
BRCC3-208ENST00000453705 DLEC1Q9Y238 1755 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 ATP5J2-PTCD1G3V325 749 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 B3GALNT1O75752 331 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 FGFR4P22455 802 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 PRPHP41219 470 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 LRRFIP1Q32MZ4 808 aaKnown RBP8.76□□□□□ -1.01
BRCC3-208ENST00000453705 KBTBD3Q8NAB2 608 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 RILPL2Q969X0 211 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 CDK5RAP3Q96JB5 506 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 LRGUKQ96M69 825 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 NIF3L1Q9GZT8 377 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 ZMYM6O95789 1325 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 SGTAO43765 313 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 CAPN2P17655 700 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 RXRBP28702 533 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 COX10Q12887 443 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 MYBPC3Q14896 1274 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 TM4SF20Q53R12 229 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 C10orf76Q5T2E6 689 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 FAM196AQ6ZSG2 479 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 TTLL11Q8NHH1 800 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 TMOD4Q9NZQ9 345 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 CFAP45Q9UL16 551 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 SNX14Q9Y5W7 946 aa8.76□□□□□ -1.01
BRCC3-208ENST00000453705 KLHL33A6NCF5 533 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 XPOTO43592 962 aaKnown RBP8.75□□□□□ -1.01
BRCC3-208ENST00000453705 ZFYP08048 801 aaPredicted RBP8.75□□□□□ -1.01
BRCC3-208ENST00000453705 PARP1P09874 1014 aaKnown RBP8.75□□□□□ -1.01
BRCC3-208ENST00000453705 SETSIPP0DME0 302 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 GNA15P30679 374 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 MCM4P33991 863 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 CRKLP46109 303 aaKnown RBP8.75□□□□□ -1.01
BRCC3-208ENST00000453705 VPS53Q5VIR6 699 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 UBN2Q6ZU65 1347 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 MROH5Q6ZUA9 1318 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 TMEM151BQ8IW70 566 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 NKAPQ8N5F7 415 aaKnown RBP8.75□□□□□ -1.01
BRCC3-208ENST00000453705 OR8H1Q8NGG4 311 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 DSCC1Q9BVC3 393 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 IL25Q9H293 177 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 ZBTB3Q9H5J0 574 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 ANLNQ9NQW6 1124 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 ZNF112Q9UJU3 913 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 MKL2Q9ULH7 1088 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 PCDHGC3Q9UN70 934 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 GPR52Q9Y2T5 361 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 LAMB1P07942 1786 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 LTBP1Q14766 1721 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 PDS5AQ29RF7 1337 aaKnown RBP8.75□□□□□ -1.01
BRCC3-208ENST00000453705 AHCYL1O43865 530 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 BTF3P20290 206 aaKnown RBP8.75□□□□□ -1.01
BRCC3-208ENST00000453705 FGFR2P21802 821 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 TMED1Q13445 227 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 ITPK1Q13572 414 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 DIXDC1Q155Q3 683 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms