RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 MAP7Q14244 749 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 NR6A1Q15406 480 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 METTL11BQ5VVY1 283 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 TMEM53Q6P2H8 277 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 PLBD1Q6P4A8 553 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 MAATS1Q7Z4T9 603 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 CABP7Q86V35 215 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 GOT1L1Q8NHS2 421 aaPredicted RBP5.49□□□□□ -1.53
EPHA3-202ENST00000452448 C1orf216Q8TAB5 229 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 FAM174AQ8TBP5 190 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 NR1H4Q96RI1 486 aaPredicted RBP5.49□□□□□ -1.53
EPHA3-202ENST00000452448 TCF12Q99081 682 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 DBNDD1Q9H9R9 158 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 PCDH18Q9HCL0 1135 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 LAMP5Q9UJQ1 280 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 MTUS1Q9ULD2 1270 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 PHF24Q9UPV7 400 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 ZFYVE16Q7Z3T8 1539 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 GPATCH8Q9UKJ3 1502 aaKnown RBP5.49□□□□□ -1.53
EPHA3-202ENST00000452448 ANKRD50Q9ULJ7 1429 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 TRAPPC8Q9Y2L5 1435 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 TMEM232C9JQI7 657 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 PLSCR1O15162 318 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 AGR2O95994 175 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 KRT13P13646 458 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 CES1P23141 567 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 GCGRP47871 477 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 NR2C2P49116 596 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 PMS2P54278 862 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 ST5P78524 1137 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 FMR1Q06787 632 aaKnown RBP eCLIP5.49□□□□□ -1.53
EPHA3-202ENST00000452448 DDR1Q08345 913 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 KLHL30Q0D2K2 578 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 FAPQ12884 760 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 CUL3Q13618 768 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 TUSC1Q2TAM9 212 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 SKOR2Q2VWA4 1001 aaPredicted RBP5.49□□□□□ -1.53
EPHA3-202ENST00000452448 ISM2Q6H9L7 571 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 PPP4R3AQ6IN85 833 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 LARP1Q6PKG0 1096 aaKnown RBP5.49□□□□□ -1.53
EPHA3-202ENST00000452448 FCHSD1Q86WN1 690 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 VPS37DQ86XT2 251 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 IFNL3Q8IZI9 196 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 TEX9Q8N6V9 391 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 TRIM58Q8NG06 486 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 CCT7Q99832 543 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 HERC2P3Q9BVR0 1158 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 TRIM8Q9BZR9 551 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 MTMR12Q9C0I1 747 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 KCTD10Q9H3F6 313 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 CLSTN2Q9H4D0 955 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 ZNF408Q9H9D4 720 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 PARVGQ9HBI0 331 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 FKBP14Q9NWM8 211 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 VPS9D1Q9Y2B5 631 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 FER1L4A9Z1Z3 1794 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 GAKO14976 1311 aa5.49□□□□□ -1.53
EPHA3-202ENST00000452448 C6orf229H3BNL8 230 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 TOR1BO14657 336 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 CHUKO15111 745 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 ACSL4O60488 711 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 CFHP08603 1231 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 UBL4AP11441 157 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 CHKAP35790 457 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 PPM1FP49593 454 aaPredicted RBP5.48□□□□□ -1.53
EPHA3-202ENST00000452448 EMP3P54852 163 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 AKAP17AQ02040 695 aaKnown RBP5.48□□□□□ -1.53
EPHA3-202ENST00000452448 MLLT1Q03111 559 aaPredicted RBP5.48□□□□□ -1.53
EPHA3-202ENST00000452448 OCLNQ16625 522 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 ALFQ53S48 1182 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 RILPL1Q5EBL4 403 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 ANO1Q5XXA6 986 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 HIBCHQ6NVY1 386 aaPredicted RBP5.48□□□□□ -1.53
EPHA3-202ENST00000452448 SH3BP5LQ7L8J4 393 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 KIAA0907Q7Z7F0 614 aaPredicted RBP5.48□□□□□ -1.53
EPHA3-202ENST00000452448 TRIM50Q86XT4 487 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 LMBR1Q8WVP7 490 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 KAT2BQ92831 832 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 EIF2AK1Q9BQI3 630 aaKnown RBP5.48□□□□□ -1.53
EPHA3-202ENST00000452448 FOXP3Q9BZS1 431 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 SRA1Q9HD15 236 aaKnown RBP5.48□□□□□ -1.53
EPHA3-202ENST00000452448 PRDM9Q9NQV7 894 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 SPTLC3Q9NUV7 552 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 SPG7Q9UQ90 795 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.48□□□□□ -1.53
EPHA3-202ENST00000452448 TARSL2A2RTX5 802 aaKnown RBP5.48□□□□□ -1.53
EPHA3-202ENST00000452448 ABLIM1O14639 778 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 CASQ2O14958 399 aaPredicted RBP5.48□□□□□ -1.53
EPHA3-202ENST00000452448 TREHO43280 583 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 TROVE2P10155 538 aaKnown RBP eCLIP5.48□□□□□ -1.53
EPHA3-202ENST00000452448 CTHP32929 405 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 ETV3P41162 512 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 GUCY2FP51841 1108 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 GJA9P57773 515 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 ITGA7Q13683 1181 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 NCOA4Q13772 614 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 DPYSQ14117 519 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 KMT5BQ4FZB7 885 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 HYIQ5T013 277 aa5.48□□□□□ -1.53
EPHA3-202ENST00000452448 FAM83BQ5T0W9 1011 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms