RNA–Protein interactions for RNA: ENST00000450743.5

UBE2D4-207, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-207ENST00000450743 SYNE3Q6ZMZ3 975 aa23.57■■□□□ 1.36
UBE2D4-207ENST00000450743 VSIG10LQ86VR7 867 aa23.57■■□□□ 1.36
UBE2D4-207ENST00000450743 MICU3Q86XE3 530 aa23.57■■□□□ 1.36
UBE2D4-207ENST00000450743 KCNB2Q92953 911 aa23.57■■□□□ 1.36
UBE2D4-207ENST00000450743 DOCK5Q9H7D0 1870 aa23.56■■□□□ 1.36
UBE2D4-207ENST00000450743 APOA5Q6Q788 366 aa23.56■■□□□ 1.36
UBE2D4-207ENST00000450743 TMTC3Q6ZXV5 915 aa23.56■■□□□ 1.36
UBE2D4-207ENST00000450743 IL31RAQ8NI17 732 aa23.56■■□□□ 1.36
UBE2D4-207ENST00000450743 TRPV6Q9H1D0 765 aa23.56■■□□□ 1.36
UBE2D4-207ENST00000450743 MRVI1Q9Y6F6 885 aa23.56■■□□□ 1.36
UBE2D4-207ENST00000450743 TRIP12Q14669 1992 aaPredicted RBP23.56■■□□□ 1.36
UBE2D4-207ENST00000450743 B4GALT4O60513 344 aa23.55■■□□□ 1.36
UBE2D4-207ENST00000450743 RGS20O76081 388 aa23.55■■□□□ 1.36
UBE2D4-207ENST00000450743 HMGB1P09429 215 aaKnown RBP23.55■■□□□ 1.36
UBE2D4-207ENST00000450743 HSPA4P34932 840 aa23.55■■□□□ 1.36
UBE2D4-207ENST00000450743 CCDC82Q8N4S0 544 aa23.55■■□□□ 1.36
UBE2D4-207ENST00000450743 AFG1LQ8WV93 481 aa23.55■■□□□ 1.36
UBE2D4-207ENST00000450743 PPP1R12CQ9BZL4 782 aa23.55■■□□□ 1.36
UBE2D4-207ENST00000450743 BRPF3Q9ULD4 1205 aa23.55■■□□□ 1.36
UBE2D4-207ENST00000450743 CCND2P30279 289 aa23.54■■□□□ 1.36
UBE2D4-207ENST00000450743 ALDH8A1Q9H2A2 487 aaPredicted RBP23.54■■□□□ 1.36
UBE2D4-207ENST00000450743 PPP4R2Q9NY27 417 aa23.54■■□□□ 1.36
UBE2D4-207ENST00000450743 hCG_1642624A0A1W2PR95 340 aa23.53■■□□□ 1.36
UBE2D4-207ENST00000450743 REC8O95072 547 aa23.53■■□□□ 1.36
UBE2D4-207ENST00000450743 MMP3P08254 477 aa23.53■■□□□ 1.36
UBE2D4-207ENST00000450743 NBPF20Q3BBV1 942 aa23.53■■□□□ 1.36
UBE2D4-207ENST00000450743 KCNV1Q6PIU1 500 aa23.53■■□□□ 1.36
UBE2D4-207ENST00000450743 CUL5Q93034 780 aa23.53■■□□□ 1.36
UBE2D4-207ENST00000450743 EMID1Q96A84 441 aaPredicted RBP23.53■■□□□ 1.36
UBE2D4-207ENST00000450743 RBM28Q9NW13 759 aaKnown RBP23.53■■□□□ 1.36
UBE2D4-207ENST00000450743 SNX14Q9Y5W7 946 aa23.53■■□□□ 1.36
UBE2D4-207ENST00000450743 FRMPD4Q14CM0 1322 aa23.53■■□□□ 1.36
UBE2D4-207ENST00000450743 PIK3CDO00329 1044 aa23.52■■□□□ 1.36
UBE2D4-207ENST00000450743 MEIS2O14770 477 aa23.52■■□□□ 1.36
UBE2D4-207ENST00000450743 ZBTB43O43298 467 aa23.52■■□□□ 1.36
UBE2D4-207ENST00000450743 CYP2C18P33260 490 aa23.52■■□□□ 1.36
UBE2D4-207ENST00000450743 LAMC2Q13753 1193 aa23.52■■□□□ 1.36
UBE2D4-207ENST00000450743 ERICH6BQ5W0A0 696 aa23.52■■□□□ 1.36
UBE2D4-207ENST00000450743 USP17L6PQ6QN14 398 aa23.52■■□□□ 1.36
UBE2D4-207ENST00000450743 TMEM199Q8N511 208 aa23.52■■□□□ 1.36
UBE2D4-207ENST00000450743 SMARCC2Q8TAQ2 1214 aa23.52■■□□□ 1.36
UBE2D4-207ENST00000450743 ZFP91Q96JP5 570 aaPredicted RBP23.52■■□□□ 1.36
UBE2D4-207ENST00000450743 HIPK3Q9H422 1215 aa23.52■■□□□ 1.36
UBE2D4-207ENST00000450743 LAMA2P24043 3122 aaKnown RBP23.52■■□□□ 1.36
UBE2D4-207ENST00000450743 CPA1P15085 419 aa23.51■■□□□ 1.35
UBE2D4-207ENST00000450743 PPIGQ13427 754 aaKnown RBP eCLIP23.51■■□□□ 1.35
UBE2D4-207ENST00000450743 RTN1Q16799 776 aa23.51■■□□□ 1.35
UBE2D4-207ENST00000450743 FAM47CQ5HY64 1035 aa23.51■■□□□ 1.35
UBE2D4-207ENST00000450743 NFRKBQ6P4R8 1299 aa23.51■■□□□ 1.35
UBE2D4-207ENST00000450743 DHX37Q8IY37 1157 aaKnown RBP23.51■■□□□ 1.35
UBE2D4-207ENST00000450743 JAKMIP1Q96N16 626 aaKnown RBP23.51■■□□□ 1.35
UBE2D4-207ENST00000450743 NOC4LQ9BVI4 516 aaKnown RBP23.51■■□□□ 1.35
UBE2D4-207ENST00000450743 TRMT13Q9NUP7 481 aaKnown RBP23.51■■□□□ 1.35
UBE2D4-207ENST00000450743 SCN5AQ14524 2016 aa23.5■■□□□ 1.35
UBE2D4-207ENST00000450743 KLF18A0A0U1RQI7 1052 aa23.5■■□□□ 1.35
UBE2D4-207ENST00000450743 SUPT20HL2P0C7V6 817 aa23.5■■□□□ 1.35
UBE2D4-207ENST00000450743 TGFB3P10600 412 aa23.5■■□□□ 1.35
UBE2D4-207ENST00000450743 CSF2RAP15509 400 aa23.5■■□□□ 1.35
UBE2D4-207ENST00000450743 CASTP20810 708 aaKnown RBP23.5■■□□□ 1.35
UBE2D4-207ENST00000450743 MRPS9P82933 396 aaKnown RBP23.5■■□□□ 1.35
UBE2D4-207ENST00000450743 PPP1R13LQ8WUF5 828 aa23.5■■□□□ 1.35
UBE2D4-207ENST00000450743 RNPC3Q96LT9 517 aaKnown RBP23.5■■□□□ 1.35
UBE2D4-207ENST00000450743 PSTPIP2Q9H939 334 aa23.5■■□□□ 1.35
UBE2D4-207ENST00000450743 UMODL1Q5DID0 1318 aa23.5■■□□□ 1.35
UBE2D4-207ENST00000450743 CNTNAP5Q8WYK1 1306 aa23.5■■□□□ 1.35
UBE2D4-207ENST00000450743 STAM2O75886 525 aa23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 RCAN1P53805 252 aa23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 FGD1P98174 961 aa23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 PTPN11Q06124 597 aaPredicted RBP23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 FUT2Q10981 343 aa23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 DGKDQ16760 1214 aa23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 CELF3Q5SZQ8 465 aaKnown RBP23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 MYSM1Q5VVJ2 828 aa23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 BLOC1S2Q6QNY1 142 aa23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 Q7L0L9 218 aa23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 C16orf59Q7L2K0 433 aa23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 DEFB123Q8N688 67 aa23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 PPTC7Q8NI37 304 aa23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 GPKOWQ92917 476 aaPredicted RBP eCLIP23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.49■■□□□ 1.35
UBE2D4-207ENST00000450743 GOLGA8AA7E2F4 631 aa23.48■■□□□ 1.35
UBE2D4-207ENST00000450743 GOLGA8BA8MQT2 603 aa23.48■■□□□ 1.35
UBE2D4-207ENST00000450743 GGPS1O95749 300 aa23.48■■□□□ 1.35
UBE2D4-207ENST00000450743 SP2Q02086 613 aa23.48■■□□□ 1.35
UBE2D4-207ENST00000450743 Q6ZUG5 572 aa23.48■■□□□ 1.35
UBE2D4-207ENST00000450743 HEATR3Q7Z4Q2 680 aa23.48■■□□□ 1.35
UBE2D4-207ENST00000450743 KAT2BQ92831 832 aa23.48■■□□□ 1.35
UBE2D4-207ENST00000450743 INPP4AQ96PE3 977 aaPredicted RBP23.48■■□□□ 1.35
UBE2D4-207ENST00000450743 FAM217BQ9NTX9 383 aaPredicted RBP23.48■■□□□ 1.35
UBE2D4-207ENST00000450743 EPB41L2O43491 1005 aaKnown RBP23.47■■□□□ 1.35
UBE2D4-207ENST00000450743 CYP2C9P11712 490 aa23.47■■□□□ 1.35
UBE2D4-207ENST00000450743 UBA1P22314 1058 aaKnown RBP23.47■■□□□ 1.35
UBE2D4-207ENST00000450743 ICAM3P32942 547 aa23.47■■□□□ 1.35
UBE2D4-207ENST00000450743 CHMP4BP1P59074 171 aa23.47■■□□□ 1.35
UBE2D4-207ENST00000450743 GNPTABQ3T906 1256 aa23.47■■□□□ 1.35
UBE2D4-207ENST00000450743 TMEM240Q5SV17 173 aa23.47■■□□□ 1.35
UBE2D4-207ENST00000450743 PCNX4Q63HM2 1172 aa23.47■■□□□ 1.35
UBE2D4-207ENST00000450743 IL23AQ9NPF7 189 aa23.47■■□□□ 1.35
UBE2D4-207ENST00000450743 RTEL1Q9NZ71 1219 aa23.47■■□□□ 1.35
UBE2D4-207ENST00000450743 KAT6AQ92794 2004 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms