RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 F8W031 263 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-205ENST00000447267 MYL6BP14649 208 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 RABGGTBP53611 331 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 FPGSQ05932 587 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 DUOXA2Q1HG44 320 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 C16orf59Q7L2K0 433 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 VN1R5Q7Z5H4 357 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 TMEM102Q8N9M5 508 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-205ENST00000447267 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.64□□□□□ -1.35
SDCBP-205ENST00000447267 NXPE3Q969Y0 559 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 TEPSINQ96N21 525 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 OSMRQ99650 979 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 CARD11Q9BXL7 1154 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 TMEM39BQ9GZU3 492 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 SEC31BQ9NQW1 1179 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 PODXL2Q9NZ53 605 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 RAXQ9Y2V3 346 aa6.64□□□□□ -1.35
SDCBP-205ENST00000447267 EPOPA6NHQ4 379 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 FLNBO75369 2602 aaKnown RBP6.63□□□□□ -1.35
SDCBP-205ENST00000447267 DLGAP3O95886 979 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 COL4A1P02462 1669 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 RPLP1P05386 114 aaKnown RBP6.63□□□□□ -1.35
SDCBP-205ENST00000447267 RAG1P15918 1043 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 PREPP48147 710 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 NLRP12P59046 1061 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 RPS8P62241 208 aaKnown RBP6.63□□□□□ -1.35
SDCBP-205ENST00000447267 TLE2Q04725 743 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 CFAP100Q494V2 611 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 PARP10Q53GL7 1025 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 GJC2Q5T442 439 aaPredicted RBP6.63□□□□□ -1.35
SDCBP-205ENST00000447267 RIF1Q5UIP0 2472 aaKnown RBP6.63□□□□□ -1.35
SDCBP-205ENST00000447267 STRIP1Q5VSL9 837 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 TTLL5Q6EMB2 1281 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 ANKRD13CQ8N6S4 541 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 PRRX2Q99811 253 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 FSD1Q9BTV5 496 aa6.63□□□□□ -1.35
SDCBP-205ENST00000447267 METTL12A8MUP2 240 aa6.62□□□□□ -1.35
SDCBP-205ENST00000447267 TCP10L2B9ZVM9 353 aa6.62□□□□□ -1.35
SDCBP-205ENST00000447267 POLR3DP05423 398 aaPredicted RBP6.62□□□□□ -1.35
SDCBP-205ENST00000447267 ACRP10323 421 aa6.62□□□□□ -1.35
SDCBP-205ENST00000447267 VCPP55072 806 aaKnown RBP6.62□□□□□ -1.35
SDCBP-205ENST00000447267 PUM1Q14671 1186 aaKnown RBP eCLIP6.62□□□□□ -1.35
SDCBP-205ENST00000447267 RAB30Q15771 203 aa6.62□□□□□ -1.35
SDCBP-205ENST00000447267 TMEM240Q5SV17 173 aa6.62□□□□□ -1.35
SDCBP-205ENST00000447267 FERMT2Q96AC1 680 aa6.62□□□□□ -1.35
SDCBP-205ENST00000447267 WRNIP1Q96S55 665 aa6.62□□□□□ -1.35
SDCBP-205ENST00000447267 C7orf69Q9H7B7 122 aa6.62□□□□□ -1.35
SDCBP-205ENST00000447267 TRMT112Q9UI30 125 aaKnown RBP6.62□□□□□ -1.35
SDCBP-205ENST00000447267 MUTYHQ9UIF7 546 aa6.62□□□□□ -1.35
SDCBP-205ENST00000447267 LTBP2Q14767 1821 aa6.62□□□□□ -1.35
SDCBP-205ENST00000447267 GAKO14976 1311 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 MYO3BQ8WXR4 1341 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 HMX2A2RU54 273 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 MYO1BO43795 1136 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 PHACTR2O75167 634 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 TGFB1P01137 390 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 IGLV1-40P01703 118 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 SSTR4P31391 388 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 IL13P35225 146 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 CD97P48960 835 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 RBM5P52756 815 aaKnown RBP eCLIP6.61□□□□□ -1.35
SDCBP-205ENST00000447267 PPATQ06203 517 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 CCL14Q16627 93 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 FRMD5Q7Z6J6 570 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 TRIM42Q8IWZ5 723 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 CERS5Q8N5B7 392 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 SLC7A3Q8WY07 619 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 UTP4Q969X6 686 aaKnown RBP6.61□□□□□ -1.35
SDCBP-205ENST00000447267 TESK2Q96S53 571 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 OSGEPQ9NPF4 335 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 REV3LO60673 3130 aa6.61□□□□□ -1.35
SDCBP-205ENST00000447267 MAP1BP46821 2468 aaKnown RBP6.6□□□□□ -1.35
SDCBP-205ENST00000447267 PRRC2BQ5JSZ5 2229 aaKnown RBP6.6□□□□□ -1.35
SDCBP-205ENST00000447267 TMEM221A6NGB7 291 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 M0R296 226 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 ADAMTS4O75173 837 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 FAM13AO94988 1023 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 ABL1P00519 1130 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 POU3F3P20264 500 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-205ENST00000447267 KCNA5P22460 613 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 RASIP1Q5U651 963 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 ALKBH2Q6NS38 261 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 FAM117BQ6P1L5 589 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 ZNF365Q70YC5 407 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 NLRP10Q86W26 655 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 ZDHHC13Q8IUH4 622 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 SUGP1Q8IWZ8 645 aaKnown RBP6.6□□□□□ -1.35
SDCBP-205ENST00000447267 KIAA2013Q8IYS2 634 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 SNX29Q8TEQ0 813 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 SMCR8Q8TEV9 937 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-205ENST00000447267 WNT8BQ93098 351 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 MYRFLQ96LU7 910 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 BHLHE41Q9C0J9 482 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-205ENST00000447267 TDRD3Q9H7E2 651 aaKnown RBP6.6□□□□□ -1.35
SDCBP-205ENST00000447267 STOML1Q9UBI4 398 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 ZNF70Q9UC06 446 aaPredicted RBP6.6□□□□□ -1.35
SDCBP-205ENST00000447267 TACC3Q9Y6A5 838 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 FAM186AA6NE01 2351 aa6.6□□□□□ -1.35
SDCBP-205ENST00000447267 ZNF292O60281 2723 aa6.59□□□□□ -1.35
SDCBP-205ENST00000447267 PRR19A6NJB7 356 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms