RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 KIF18BQ86Y91 864 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 TP53INP2Q8IXH6 220 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 UBR7Q8N806 425 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 PANK1Q8TE04 598 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 LEO1Q8WVC0 666 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 FBXW5Q969U6 566 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 TRMT2BQ96GJ1 504 aaKnown RBP6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 WNK4Q96J92 1243 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 ORAI3Q9BRQ5 295 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 CELF4Q9BZC1 486 aaKnown RBP6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 CDIP1Q9H305 208 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 BTG4Q9NY30 223 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 MARCH2Q9P0N8 246 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 SAMD15Q9P1V8 674 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 ACSL6Q9UKU0 697 aa6.1□□□□□ -1.43
HMGB1P16-201ENST00000447155 KPNA6O60684 536 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 PPP1R11O60927 126 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 HPXP02790 462 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 SRGAP2CP0DJJ0 459 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 POU3F3P20264 500 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 NFKB2Q00653 900 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 PCBP1Q15365 356 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 PKN3Q6P5Z2 889 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 C16orf59Q7L2K0 433 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 TEX2Q8IWB9 1127 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 LZTR1Q8N653 840 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 IGSF22Q8N9C0 903 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 MTA3Q9BTC8 594 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 C19orf73Q9NVV2 129 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 IMPACTQ9P2X3 320 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 PPARGC1AQ9UBK2 798 aaKnown RBP6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 X6R8D5 127 aa6.09□□□□□ -1.43
HMGB1P16-201ENST00000447155 CCDC66A2RUB6 948 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 NOTOA8MTQ0 251 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 C22orf46C9J442 243 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 CBX4O00257 560 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 FUCA1P04066 466 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 CPEP16870 476 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 FPR2P25090 351 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 ST5P78524 1137 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 LRP8Q14114 963 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 DHCR24Q15392 516 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 MROH9Q5TGP6 573 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 LILRA2Q8N149 483 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 AFAP1L2Q8N4X5 818 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 NUP43Q8NFH3 380 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 PLEKHO2Q8TD55 490 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 USP33Q8TEY7 942 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 KCNJ15Q99712 375 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 EPB41L1Q9H4G0 881 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 SP110Q9HB58 689 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 PDLIM7Q9NR12 457 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 MBNL3Q9NUK0 354 aaKnown RBP6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 MCM8Q9UJA3 840 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 ADAMTS6Q9UKP5 1117 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 ATP8A1Q9Y2Q0 1164 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 COA3Q9Y2R0 106 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 COQ6Q9Y2Z9 468 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 RWDD3Q9Y3V2 267 aa6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 ZCCHC6Q5VYS8 1495 aaKnown RBP6.08□□□□□ -1.44
HMGB1P16-201ENST00000447155 M0R2C6 588 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 ADAMTS4O75173 837 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 GLRX3O76003 335 aaKnown RBP6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 RNASE1P07998 156 aaKnown RBP6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 PYGMP11217 842 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 RAC2P15153 192 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 PRKCAP17252 672 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 DNM2P50570 870 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 MVKQ03426 396 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 SNX17Q15036 470 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 SEPT7Q16181 437 aaKnown RBP6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 ZNF792Q3KQV3 632 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 TMEM177Q53S58 311 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 ZMYM1Q5SVZ6 1142 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 WWC2Q6AWC2 1192 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 RIOX2Q8IUF8 465 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 PLCD4Q9BRC7 762 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 JAM3Q9BX67 310 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 CABP5Q9NP86 173 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 CATSPERZQ9NTU4 200 aa6.07□□□□□ -1.44
HMGB1P16-201ENST00000447155 MSL3P1P0C860 447 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 SCNN1BP51168 640 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 ERVFC1P60507 584 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 SPIRE1Q08AE8 756 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 CRY1Q16526 586 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 OVCH1Q7RTY7 1134 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 NLRX1Q86UT6 975 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 DDX42Q86XP3 938 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 RPUSD2Q8IZ73 545 aaKnown RBP6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 CHST14Q8NCH0 376 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 OR2W6PQ8NHA6 318 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 MYLIPQ8WY64 445 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 FAM126AQ9BYI3 521 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 CTNND2Q9UQB3 1225 aa6.06□□□□□ -1.44
HMGB1P16-201ENST00000447155 A0A1W2PQJ5 194 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 PSPNO60542 156 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 DGKIO75912 1065 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 EYA4O95677 639 aa6.05□□□□□ -1.44
HMGB1P16-201ENST00000447155 F2P00734 622 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms