RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 RAB17Q9H0T7 212 aa17.34■□□□□ 0.37
SIK3-205ENST00000446921 CARD9Q9H257 536 aa17.34■□□□□ 0.37
SIK3-205ENST00000446921 CABP5Q9NP86 173 aa17.34■□□□□ 0.37
SIK3-205ENST00000446921 SEC31BQ9NQW1 1179 aa17.34■□□□□ 0.37
SIK3-205ENST00000446921 ITM2BQ9Y287 266 aa17.34■□□□□ 0.37
SIK3-205ENST00000446921 USP42Q9H9J4 1324 aaKnown RBP17.33■□□□□ 0.37
SIK3-205ENST00000446921 HNRNPRO43390 633 aaKnown RBP17.33■□□□□ 0.37
SIK3-205ENST00000446921 NPTXRO95502 500 aa17.33■□□□□ 0.37
SIK3-205ENST00000446921 UBTFL6P0CB48 400 aaPredicted RBP17.33■□□□□ 0.37
SIK3-205ENST00000446921 ZCCHC18P0CG32 403 aa17.33■□□□□ 0.37
SIK3-205ENST00000446921 SKIP12755 728 aa17.33■□□□□ 0.37
SIK3-205ENST00000446921 ETS2P15036 469 aa17.33■□□□□ 0.37
SIK3-205ENST00000446921 MED23Q9ULK4 1368 aa17.33■□□□□ 0.37
SIK3-205ENST00000446921 GNAT2P19087 354 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 CLCN2P51788 898 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 COPS2P61201 443 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 SLC39A6Q13433 755 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 MTMR3Q13615 1198 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 CLMNQ96JQ2 1002 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 DBNDD2Q9BQY9 259 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 BRD8Q9H0E9 1235 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 PCDHA13Q9Y5I0 950 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 ARID5AQ03989 594 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 RNASELQ05823 741 aaKnown RBP17.33■□□□□ 0.36
SIK3-205ENST00000446921 ZNF844Q08AG5 666 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 PTPAQ15257 358 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 TANGO6Q9C0B7 1094 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 FAM207AQ9NSI2 230 aaPredicted RBP17.33■□□□□ 0.36
SIK3-205ENST00000446921 ATXN10Q9UBB4 475 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.33■□□□□ 0.36
SIK3-205ENST00000446921 ITIH6Q6UXX5 1313 aa17.33■□□□□ 0.36
SIK3-205ENST00000446921 NCALDP61601 193 aa17.32■□□□□ 0.36
SIK3-205ENST00000446921 USP46P62068 366 aa17.32■□□□□ 0.36
SIK3-205ENST00000446921 EXOSC10Q01780 885 aaKnown RBP17.32■□□□□ 0.36
SIK3-205ENST00000446921 SSRP1Q08945 709 aaKnown RBP17.32■□□□□ 0.36
SIK3-205ENST00000446921 MB21D1Q8N884 522 aa17.32■□□□□ 0.36
SIK3-205ENST00000446921 NCOA7Q8NI08 942 aa17.32■□□□□ 0.36
SIK3-205ENST00000446921 IFIT3O14879 490 aaKnown RBP17.32■□□□□ 0.36
SIK3-205ENST00000446921 RAD51CO43502 376 aa17.32■□□□□ 0.36
SIK3-205ENST00000446921 SPTY2D1Q68D10 685 aaPredicted RBP17.32■□□□□ 0.36
SIK3-205ENST00000446921 MAP7D3Q8IWC1 876 aa17.32■□□□□ 0.36
SIK3-205ENST00000446921 ZMYND8Q9ULU4 1186 aaPredicted RBP17.32■□□□□ 0.36
SIK3-205ENST00000446921 CACNA2D1P54289 1103 aa17.32■□□□□ 0.36
SIK3-205ENST00000446921 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.32■□□□□ 0.36
SIK3-205ENST00000446921 TRIM22Q8IYM9 498 aa17.32■□□□□ 0.36
SIK3-205ENST00000446921 DDX12PQ92771 950 aa17.32■□□□□ 0.36
SIK3-205ENST00000446921 TEKT1Q969V4 418 aa17.32■□□□□ 0.36
SIK3-205ENST00000446921 AP1M1Q9BXS5 423 aa17.32■□□□□ 0.36
SIK3-205ENST00000446921 KCNK3O14649 394 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 HSPD1P10809 573 aaKnown RBP17.31■□□□□ 0.36
SIK3-205ENST00000446921 ZNF449Q6P9G9 518 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 EXOC8Q8IYI6 725 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 RUBCNQ92622 972 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 SNRKQ9NRH2 765 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 IQGAP3Q86VI3 1631 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 TRIM49BA6NDI0 452 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 F8W031 263 aaPredicted RBP17.31■□□□□ 0.36
SIK3-205ENST00000446921 ZNF213O14771 459 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 PLEKP08567 350 aaPredicted RBP17.31■□□□□ 0.36
SIK3-205ENST00000446921 PBX1P40424 430 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 GNAQP50148 359 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 CCNJLQ8IV13 435 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 MORC4Q8TE76 937 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.31■□□□□ 0.36
SIK3-205ENST00000446921 ZWILCHQ9H900 591 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 UTP6Q9NYH9 597 aaKnown RBP17.31■□□□□ 0.36
SIK3-205ENST00000446921 CTTNBP2NLQ9P2B4 639 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 KLHL14Q9P2G3 628 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 SLC12A6Q9UHW9 1150 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 PNMA3Q9UL41 463 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 NUB1Q9Y5A7 615 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 BYSLQ13895 437 aaKnown RBP17.31■□□□□ 0.36
SIK3-205ENST00000446921 RIC3Q7Z5B4 369 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 UCMAQ8WVF2 138 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 SUN2Q9UH99 717 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 PCDHB6Q9Y5E3 794 aa17.31■□□□□ 0.36
SIK3-205ENST00000446921 SRRM3A6NNA2 597 aaPredicted RBP17.3■□□□□ 0.36
SIK3-205ENST00000446921 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 FUT4P22083 530 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 NLRP5P59047 1200 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 TFCP2Q12800 502 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 KIAA0753Q2KHM9 967 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 TMC4Q7Z404 712 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 DDX50Q9BQ39 737 aaKnown RBP17.3■□□□□ 0.36
SIK3-205ENST00000446921 FAM129AQ9BZQ8 928 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 PLCB1Q9NQ66 1216 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 CCDC87Q9NVE4 849 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 NDUFB5O43674 189 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 NOSTRINQ8IVI9 506 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 CD302Q8IX05 232 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 FGFR1OP2Q9NVK5 253 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 EIF4A3P38919 411 aaKnown RBP17.3■□□□□ 0.36
SIK3-205ENST00000446921 CEBPAP49715 358 aaPredicted RBP17.3■□□□□ 0.36
SIK3-205ENST00000446921 PDE6CP51160 858 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 RBM26Q5T8P6 1007 aaKnown RBP17.3■□□□□ 0.36
SIK3-205ENST00000446921 CDKAL1Q5VV42 579 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 PAGE5Q96GU1 130 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 OCEL1Q9H607 264 aa17.3■□□□□ 0.36
SIK3-205ENST00000446921 DBF4Q9UBU7 674 aaPredicted RBP17.3■□□□□ 0.36
SIK3-205ENST00000446921 LNPEPQ9UIQ6 1025 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms