RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 CTAGE1Q96RT6 745 aa17.45■□□□□ 0.38
MRPL40-202ENST00000443660 KATNAL1Q9BW62 490 aa17.45■□□□□ 0.38
MRPL40-202ENST00000443660 HDAC6Q9UBN7 1215 aa17.45■□□□□ 0.38
MRPL40-202ENST00000443660 GTF2IRD1Q9UHL9 959 aa17.45■□□□□ 0.38
MRPL40-202ENST00000443660 PIEZO1Q92508 2521 aa17.45■□□□□ 0.38
MRPL40-202ENST00000443660 WDR19Q8NEZ3 1342 aa17.45■□□□□ 0.38
MRPL40-202ENST00000443660 DCXO43602 365 aa17.44■□□□□ 0.38
MRPL40-202ENST00000443660 AMHP03971 560 aa17.44■□□□□ 0.38
MRPL40-202ENST00000443660 PTK7Q13308 1070 aa17.44■□□□□ 0.38
MRPL40-202ENST00000443660 KAT2BQ92831 832 aa17.44■□□□□ 0.38
MRPL40-202ENST00000443660 MRPL38Q96DV4 380 aaKnown RBP17.44■□□□□ 0.38
MRPL40-202ENST00000443660 ALG1Q9BT22 464 aa17.44■□□□□ 0.38
MRPL40-202ENST00000443660 MAF1Q9H063 256 aa17.44■□□□□ 0.38
MRPL40-202ENST00000443660 KCNH6Q9H252 994 aa17.44■□□□□ 0.38
MRPL40-202ENST00000443660 TCP11L1Q9NUJ3 509 aa17.44■□□□□ 0.38
MRPL40-202ENST00000443660 SCN10AQ9Y5Y9 1956 aa17.44■□□□□ 0.38
MRPL40-202ENST00000443660 FGRP09769 529 aa17.43■□□□□ 0.38
MRPL40-202ENST00000443660 PDHBP11177 359 aa17.43■□□□□ 0.38
MRPL40-202ENST00000443660 PSEN2P49810 448 aa17.43■□□□□ 0.38
MRPL40-202ENST00000443660 ARHGAP1Q07960 439 aa17.43■□□□□ 0.38
MRPL40-202ENST00000443660 STXBP2Q15833 593 aa17.43■□□□□ 0.38
MRPL40-202ENST00000443660 USH1GQ495M9 461 aa17.43■□□□□ 0.38
MRPL40-202ENST00000443660 EP400NLQ6ZTU2 488 aa17.43■□□□□ 0.38
MRPL40-202ENST00000443660 NSUN6Q8TEA1 469 aaKnown RBP17.43■□□□□ 0.38
MRPL40-202ENST00000443660 TTC14Q96N46 770 aa17.43■□□□□ 0.38
MRPL40-202ENST00000443660 SAMD11Q96NU1 681 aa17.43■□□□□ 0.38
MRPL40-202ENST00000443660 C17orf80Q9BSJ5 609 aa17.43■□□□□ 0.38
MRPL40-202ENST00000443660 LGR5O75473 907 aa17.42■□□□□ 0.38
MRPL40-202ENST00000443660 ZNF543Q08ER8 600 aa17.42■□□□□ 0.38
MRPL40-202ENST00000443660 TCTN1Q2MV58 587 aa17.42■□□□□ 0.38
MRPL40-202ENST00000443660 TIGD5Q53EQ6 642 aa17.42■□□□□ 0.38
MRPL40-202ENST00000443660 ZNF618Q5T7W0 954 aa17.42■□□□□ 0.38
MRPL40-202ENST00000443660 NEK9Q8TD19 979 aa17.42■□□□□ 0.38
MRPL40-202ENST00000443660 IWS1Q96ST2 819 aa17.42■□□□□ 0.38
MRPL40-202ENST00000443660 MUC6Q6W4X9 2439 aa17.42■□□□□ 0.38
MRPL40-202ENST00000443660 EMSYQ7Z589 1322 aa17.42■□□□□ 0.38
MRPL40-202ENST00000443660 H3BQ06 376 aaPredicted RBP17.41■□□□□ 0.38
MRPL40-202ENST00000443660 NHLH1Q02575 133 aa17.41■□□□□ 0.38
MRPL40-202ENST00000443660 LAMC2Q13753 1193 aa17.41■□□□□ 0.38
MRPL40-202ENST00000443660 MFSD10Q14728 455 aa17.41■□□□□ 0.38
MRPL40-202ENST00000443660 KIAA0753Q2KHM9 967 aa17.41■□□□□ 0.38
MRPL40-202ENST00000443660 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.41■□□□□ 0.381e-8■■□□□ 13.6
MRPL40-202ENST00000443660 MCF2L2Q86YR7 1114 aa17.41■□□□□ 0.38
MRPL40-202ENST00000443660 DHX37Q8IY37 1157 aaKnown RBP17.41■□□□□ 0.38
MRPL40-202ENST00000443660 MYOCDQ8IZQ8 938 aa17.41■□□□□ 0.38
MRPL40-202ENST00000443660 BANK1Q8NDB2 785 aa17.41■□□□□ 0.38
MRPL40-202ENST00000443660 TAAR1Q96RJ0 339 aa17.41■□□□□ 0.38
MRPL40-202ENST00000443660 UPF3BQ9BZI7 483 aaKnown RBP17.41■□□□□ 0.38
MRPL40-202ENST00000443660 PRKAG3Q9UGI9 489 aa17.41■□□□□ 0.38
MRPL40-202ENST00000443660 POTEB3A0JP26 581 aa17.4■□□□□ 0.38
MRPL40-202ENST00000443660 FOXP2O15409 715 aa17.4■□□□□ 0.38
MRPL40-202ENST00000443660 GPM6BQ13491 265 aa17.4■□□□□ 0.38
MRPL40-202ENST00000443660 ALX1Q15699 326 aa17.4■□□□□ 0.38
MRPL40-202ENST00000443660 EPC2Q52LR7 807 aa17.4■□□□□ 0.38
MRPL40-202ENST00000443660 GPATCH4Q5T3I0 446 aaKnown RBP17.4■□□□□ 0.38
MRPL40-202ENST00000443660 POTEBQ6S5H4 581 aa17.4■□□□□ 0.38
MRPL40-202ENST00000443660 DBF4BQ8NFT6 615 aa17.4■□□□□ 0.38
MRPL40-202ENST00000443660 PI4K2BQ8TCG2 481 aa17.4■□□□□ 0.38
MRPL40-202ENST00000443660 FBXL18Q96ME1 805 aa17.4■□□□□ 0.38
MRPL40-202ENST00000443660 RMDN3Q96TC7 470 aa17.4■□□□□ 0.38
MRPL40-202ENST00000443660 DDX41Q9UJV9 622 aaKnown RBP17.4■□□□□ 0.38
MRPL40-202ENST00000443660 TANC1Q9C0D5 1861 aa17.39■□□□□ 0.38
MRPL40-202ENST00000443660 RSPH10B2B2RC85 870 aa17.39■□□□□ 0.37
MRPL40-202ENST00000443660 EIF3JO75822 258 aaKnown RBP17.39■□□□□ 0.37
MRPL40-202ENST00000443660 RSPH10BP0C881 870 aa17.39■□□□□ 0.37
MRPL40-202ENST00000443660 HTRA4P83105 476 aaPredicted RBP17.39■□□□□ 0.37
MRPL40-202ENST00000443660 TRIM71Q2Q1W2 868 aaKnown RBP17.39■□□□□ 0.37
MRPL40-202ENST00000443660 VPS53Q5VIR6 699 aa17.39■□□□□ 0.37
MRPL40-202ENST00000443660 ARHGEF16Q5VV41 709 aa17.39■□□□□ 0.37
MRPL40-202ENST00000443660 SYTL5Q8TDW5 730 aaPredicted RBP17.39■□□□□ 0.37
MRPL40-202ENST00000443660 TBC1D5Q92609 795 aa17.39■□□□□ 0.37
MRPL40-202ENST00000443660 EMID1Q96A84 441 aaPredicted RBP17.39■□□□□ 0.37
MRPL40-202ENST00000443660 PABPC5Q96DU9 382 aaKnown RBP17.39■□□□□ 0.37
MRPL40-202ENST00000443660 YME1L1Q96TA2 773 aa17.39■□□□□ 0.37
MRPL40-202ENST00000443660 MRVI1Q9Y6F6 885 aa17.39■□□□□ 0.37
MRPL40-202ENST00000443660 ABCB11O95342 1321 aa17.39■□□□□ 0.37
MRPL40-202ENST00000443660 TET1Q8NFU7 2136 aa17.39■□□□□ 0.37
MRPL40-202ENST00000443660 LCTP09848 1927 aa17.39■□□□□ 0.37
MRPL40-202ENST00000443660 H3BNC9 293 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 NCK2O43639 380 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 PPFIA4O75335 1185 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 F2P00734 622 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 FGAP02671 866 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 SNHG28P0DPA3 235 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 THPOP40225 353 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 MBTPS1Q14703 1052 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 TRAF7Q6Q0C0 670 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 PPTC7Q8NI37 304 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 SP7Q8TDD2 431 aaPredicted RBP17.38■□□□□ 0.37
MRPL40-202ENST00000443660 MFSD14AQ96MC6 490 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 UBA5Q9GZZ9 404 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 HELLSQ9NRZ9 838 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
MRPL40-202ENST00000443660 COL4A4P53420 1690 aaPredicted RBP17.38■□□□□ 0.37
MRPL40-202ENST00000443660 HAS3O00219 553 aa17.37■□□□□ 0.37
MRPL40-202ENST00000443660 ZNF286BP0CG31 522 aa17.37■□□□□ 0.37
MRPL40-202ENST00000443660 GOLGA8HP0CJ92 632 aa17.37■□□□□ 0.37
MRPL40-202ENST00000443660 ZNF200P98182 395 aaPredicted RBP17.37■□□□□ 0.37
MRPL40-202ENST00000443660 TCEAL5Q5H9L2 206 aa17.37■□□□□ 0.37
MRPL40-202ENST00000443660 MFSD6Q6ZSS7 791 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms