RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 LTFP02788 710 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 RBP3P10745 1247 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 CYP2C19P33261 490 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 HTRA3P83110 453 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 RASSF7Q02833 373 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 CDK5R2Q13319 367 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 PICALMQ13492 652 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 GTF2H3Q13889 308 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 GBX1Q14549 363 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 CMTR2Q8IYT2 770 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 SPICE1Q8N0Z3 855 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 RCBTB1Q8NDN9 531 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 MRPL18Q9H0U6 180 aaKnown RBP5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 OXSMQ9NWU1 459 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 FAM50BQ9Y247 325 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 DAAM1Q9Y4D1 1078 aa5.18□□□□□ -1.58
CDC42BPA-207ENST00000441725 CNTNAP5Q8WYK1 1306 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 APAF1O14727 1248 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 TGM5O43548 720 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 H2AFYO75367 372 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 GSNP06396 782 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 RAC1P63000 192 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 SNRPNP63162 240 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 LRRC32Q14392 662 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 ARHGAP29Q52LW3 1261 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 COBLL1Q53SF7 1204 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 E4F1Q66K89 784 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 IGF2-ASQ6U949 168 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 BEND7Q8N7W2 519 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 FBLIM1Q8WUP2 373 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 DIO2Q92813 273 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 HSPBAP1Q96EW2 488 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 TRIM11Q96F44 468 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 SLC12A5Q9H2X9 1139 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 IPPKQ9H8X2 491 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 PTPRHQ9HD43 1115 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 BSDC1Q9NW68 430 aaPredicted RBP5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 MKS1Q9NXB0 559 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 PPARGC1AQ9UBK2 798 aaKnown RBP5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 RCAN3Q9UKA8 241 aa5.17□□□□□ -1.58
CDC42BPA-207ENST00000441725 WNT9AO14904 365 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 ALX3O95076 343 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 CFBP00751 764 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 SEPHS1P49903 392 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 USP11P51784 963 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 SCAND1P57086 179 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 MORC3Q14149 939 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 KIZQ2M2Z5 673 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 FAM43BQ6ZT52 329 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 TOP6BLQ8N6T0 577 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 HDAC8Q9BY41 377 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 CBLCQ9ULV8 474 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 LAS1LQ9Y4W2 734 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 PCDHA2Q9Y5H9 948 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 FAM229AH3BQW9 127 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 XPOTO43592 962 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 ZRANB2O95218 330 aaKnown RBP eCLIP5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 CYP7A1P22680 504 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 KRT85P78386 507 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 ST5P78524 1137 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 SAFBQ15424 915 aaKnown RBP eCLIP5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 HSP90AB4PQ58FF6 505 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 FAM47CQ5HY64 1035 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 MBLAC2Q68D91 279 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 EFHBQ8N7U6 833 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 C2orf69Q8N8R5 385 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 AIFM3Q96NN9 605 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 SLC12A9Q9BXP2 914 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 MS4A5Q9H3V2 200 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 RRAGCQ9HB90 399 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 TOPORSQ9NS56 1045 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 SAP30BPQ9UHR5 308 aaKnown RBP5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 FRMPD2Q68DX3 1309 aaPredicted RBP5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 CLSPNQ9HAW4 1339 aa5.16□□□□□ -1.58
CDC42BPA-207ENST00000441725 F8W735 103 aaPredicted RBP5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 GDF11O95390 407 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 IL33O95760 270 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 KCNAB2Q13303 367 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 INF2Q27J81 1249 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 CYB5RLQ6IPT4 315 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 SHISA2Q6UWI4 295 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 SEZ6L2Q6UXD5 910 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 MORC1Q86VD1 984 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 TMEM151AQ8N4L1 468 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 FBXW5Q969U6 566 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 DUSP23Q9BVJ7 150 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 MAF1Q9H063 256 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 ASCC2Q9H1I8 757 aaPredicted RBP5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 PPCSQ9HAB8 311 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 GNL3LQ9NVN8 582 aaKnown RBP5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 FBXL7Q9UJT9 491 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 KCNH3Q9ULD8 1083 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 MKL2Q9ULH7 1088 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 MRFAP1Q9Y605 127 aa5.15□□□□□ -1.58
CDC42BPA-207ENST00000441725 ERC2O15083 957 aa5.15□□□□□ -1.59
CDC42BPA-207ENST00000441725 LEFTY1O75610 366 aa5.15□□□□□ -1.59
CDC42BPA-207ENST00000441725 CBX7O95931 251 aa5.15□□□□□ -1.59
CDC42BPA-207ENST00000441725 SERPINB3P29508 390 aa5.15□□□□□ -1.59
CDC42BPA-207ENST00000441725 ZRSR2Q15696 482 aaKnown RBP5.15□□□□□ -1.59
CDC42BPA-207ENST00000441725 GRAMD1BQ3KR37 738 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms